data_3HC2
#
_model_server_result.job_id            52aIqw0exKU6-h0HfHkk5Q 
_model_server_result.datetime_utc      '2024-10-28 14:27:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hc2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    3HC2 
#
_exptl.entry_id    3HC2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              395.352 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HC2 
_cell.length_a            86.449 
_cell.length_b            86.449 
_cell.length_c            153.782 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HC2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 185 A CYS 185 1_555 C MO MO . A MO 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc2 B S1' MTE . A MTE 501 1_555 C MO MO . A MO 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc3 B S2' MTE . A MTE 501 1_555 C MO MO . A MO 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
#
_chem_comp.formula           'C10 H14 N5 O6 P S2' 
_chem_comp.formula_weight    395.352 
_chem_comp.id                MTE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 MTE doub 237 n y 
N1 C10 MTE sing 238 n y 
C2 N2 MTE sing 239 n n 
C2 N3 MTE sing 240 n y 
N2 HN21 MTE sing 241 n n 
N2 HN22 MTE sing 242 n n 
N3 C4 MTE sing 243 n y 
N3 HN3 MTE sing 244 n n 
C4 O4 MTE doub 245 n n 
C4 C9 MTE sing 246 n y 
N5 C6 MTE sing 247 n n 
N5 C9 MTE sing 248 n n 
N5 HN5 MTE sing 249 n n 
C6 C7 MTE sing 250 n n 
C6 C1' MTE sing 251 n n 
C6 H6 MTE sing 252 n n 
C7 N8 MTE sing 253 n n 
C7 O3' MTE sing 254 n n 
C7 H7 MTE sing 255 n n 
N8 C10 MTE sing 256 n n 
N8 HN8 MTE sing 257 n n 
C9 C10 MTE doub 258 n y 
C1' S1' MTE sing 259 n n 
C1' C2' MTE doub 260 n n 
S1' H1S MTE sing 261 n n 
C2' S2' MTE sing 262 n n 
C2' C3' MTE sing 263 n n 
S2' H2S MTE sing 264 n n 
C3' O3' MTE sing 265 n n 
C3' C4' MTE sing 266 n n 
C3' H3' MTE sing 267 n n 
C4' O4' MTE sing 268 n n 
C4' "H4'1" MTE sing 269 n n 
C4' "H4'2" MTE sing 270 n n 
O4' P MTE sing 271 n n 
P O1P MTE doub 272 n n 
P O2P MTE sing 273 n n 
P O3P MTE sing 274 n n 
O2P HOP2 MTE sing 275 n n 
O3P HOP3 MTE sing 276 n n 
#
_atom_sites.entry_id                     3HC2 
_atom_sites.fract_transf_matrix[1][1]    0.011568 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011568 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006503 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MTE A 1 501 501 MTE MTE . 
C 3 MO A 1 1501 1501 MO MO . 
D 4 HOH A 1 467 1 HOH HOH . 
D 4 HOH A 2 468 2 HOH HOH . 
D 4 HOH A 3 469 3 HOH HOH . 
D 4 HOH A 4 470 4 HOH HOH . 
D 4 HOH A 5 471 5 HOH HOH . 
D 4 HOH A 6 472 6 HOH HOH . 
D 4 HOH A 7 473 7 HOH HOH . 
D 4 HOH A 8 474 8 HOH HOH . 
D 4 HOH A 9 475 9 HOH HOH . 
D 4 HOH A 10 476 10 HOH HOH . 
D 4 HOH A 11 477 11 HOH HOH . 
D 4 HOH A 12 478 12 HOH HOH . 
D 4 HOH A 13 479 13 HOH HOH . 
D 4 HOH A 14 480 14 HOH HOH . 
D 4 HOH A 15 481 15 HOH HOH . 
D 4 HOH A 16 482 16 HOH HOH . 
D 4 HOH A 17 483 17 HOH HOH . 
D 4 HOH A 18 484 18 HOH HOH . 
D 4 HOH A 19 485 19 HOH HOH . 
D 4 HOH A 20 486 20 HOH HOH . 
D 4 HOH A 21 487 21 HOH HOH . 
D 4 HOH A 22 488 22 HOH HOH . 
D 4 HOH A 23 489 23 HOH HOH . 
D 4 HOH A 24 490 24 HOH HOH . 
D 4 HOH A 25 491 25 HOH HOH . 
D 4 HOH A 26 492 26 HOH HOH . 
D 4 HOH A 27 493 27 HOH HOH . 
D 4 HOH A 28 494 28 HOH HOH . 
D 4 HOH A 29 495 29 HOH HOH . 
D 4 HOH A 30 496 30 HOH HOH . 
D 4 HOH A 31 497 31 HOH HOH . 
D 4 HOH A 32 498 32 HOH HOH . 
D 4 HOH A 33 499 33 HOH HOH . 
D 4 HOH A 34 500 34 HOH HOH . 
D 4 HOH A 35 502 35 HOH HOH . 
D 4 HOH A 36 503 36 HOH HOH . 
D 4 HOH A 37 504 37 HOH HOH . 
D 4 HOH A 38 505 38 HOH HOH . 
D 4 HOH A 39 506 39 HOH HOH . 
D 4 HOH A 40 507 40 HOH HOH . 
D 4 HOH A 41 508 41 HOH HOH . 
D 4 HOH A 42 509 42 HOH HOH . 
D 4 HOH A 43 510 43 HOH HOH . 
D 4 HOH A 44 511 44 HOH HOH . 
D 4 HOH A 45 512 45 HOH HOH . 
D 4 HOH A 46 513 46 HOH HOH . 
D 4 HOH A 47 514 47 HOH HOH . 
D 4 HOH A 48 515 48 HOH HOH . 
D 4 HOH A 49 516 49 HOH HOH . 
D 4 HOH A 50 517 50 HOH HOH . 
D 4 HOH A 51 518 51 HOH HOH . 
D 4 HOH A 52 519 52 HOH HOH . 
D 4 HOH A 53 520 53 HOH HOH . 
D 4 HOH A 54 521 54 HOH HOH . 
D 4 HOH A 55 522 55 HOH HOH . 
D 4 HOH A 56 523 56 HOH HOH . 
D 4 HOH A 57 524 57 HOH HOH . 
D 4 HOH A 58 525 58 HOH HOH . 
D 4 HOH A 59 526 59 HOH HOH . 
D 4 HOH A 60 527 60 HOH HOH . 
D 4 HOH A 61 528 61 HOH HOH . 
D 4 HOH A 62 529 62 HOH HOH . 
D 4 HOH A 63 530 63 HOH HOH . 
D 4 HOH A 64 531 64 HOH HOH . 
D 4 HOH A 65 532 65 HOH HOH . 
D 4 HOH A 66 533 66 HOH HOH . 
D 4 HOH A 67 534 67 HOH HOH . 
D 4 HOH A 68 535 68 HOH HOH . 
D 4 HOH A 69 536 69 HOH HOH . 
D 4 HOH A 70 537 70 HOH HOH . 
D 4 HOH A 71 538 71 HOH HOH . 
D 4 HOH A 72 539 72 HOH HOH . 
D 4 HOH A 73 540 73 HOH HOH . 
D 4 HOH A 74 541 74 HOH HOH . 
D 4 HOH A 75 542 75 HOH HOH . 
D 4 HOH A 76 543 76 HOH HOH . 
D 4 HOH A 77 544 77 HOH HOH . 
D 4 HOH A 78 545 78 HOH HOH . 
D 4 HOH A 79 546 79 HOH HOH . 
D 4 HOH A 80 547 80 HOH HOH . 
D 4 HOH A 81 548 81 HOH HOH . 
D 4 HOH A 82 549 82 HOH HOH . 
D 4 HOH A 83 550 83 HOH HOH . 
D 4 HOH A 84 551 84 HOH HOH . 
D 4 HOH A 85 552 85 HOH HOH . 
D 4 HOH A 86 553 86 HOH HOH . 
D 4 HOH A 87 554 87 HOH HOH . 
D 4 HOH A 88 555 88 HOH HOH . 
D 4 HOH A 89 556 89 HOH HOH . 
D 4 HOH A 90 557 90 HOH HOH . 
D 4 HOH A 91 558 91 HOH HOH . 
D 4 HOH A 92 559 92 HOH HOH . 
D 4 HOH A 93 560 93 HOH HOH . 
D 4 HOH A 94 561 94 HOH HOH . 
D 4 HOH A 95 562 95 HOH HOH . 
D 4 HOH A 96 563 96 HOH HOH . 
D 4 HOH A 97 564 97 HOH HOH . 
D 4 HOH A 98 565 98 HOH HOH . 
D 4 HOH A 99 566 99 HOH HOH . 
D 4 HOH A 100 567 100 HOH HOH . 
D 4 HOH A 101 568 101 HOH HOH . 
D 4 HOH A 102 569 102 HOH HOH . 
D 4 HOH A 103 570 103 HOH HOH . 
D 4 HOH A 104 571 104 HOH HOH . 
D 4 HOH A 105 572 105 HOH HOH . 
D 4 HOH A 106 573 106 HOH HOH . 
D 4 HOH A 107 574 1 HOH HOH . 
D 4 HOH A 108 575 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 MTE . . . B 2 8.513 23.1 -6.534 1 31.7 ? N1 MTE 501 A 1 
HETATM 2 C C2 MTE . . . B 2 9.439 24.072 -6.494 1 33.51 ? C2 MTE 501 A 1 
HETATM 3 N N2 MTE . . . B 2 9.851 24.614 -7.672 1 31.98 ? N2 MTE 501 A 1 
HETATM 4 N N3 MTE . . . B 2 9.971 24.504 -5.324 1 34.82 ? N3 MTE 501 A 1 
HETATM 5 C C4 MTE . . . B 2 9.597 24.026 -4.132 1 34.27 ? C4 MTE 501 A 1 
HETATM 6 O O4 MTE . . . B 2 10.109 24.468 -3.088 1 37.54 ? O4 MTE 501 A 1 
HETATM 7 N N5 MTE . . . B 2 8.122 22.369 -2.958 1 31.78 ? N5 MTE 501 A 1 
HETATM 8 C C6 MTE . . . B 2 7.676 20.972 -3.125 1 31.28 ? C6 MTE 501 A 1 
HETATM 9 C C7 MTE . . . B 2 6.669 20.869 -4.272 1 30.05 ? C7 MTE 501 A 1 
HETATM 10 N N8 MTE . . . B 2 7.119 21.553 -5.474 1 29.76 ? N8 MTE 501 A 1 
HETATM 11 C C9 MTE . . . B 2 8.574 22.966 -4.09 1 33.7 ? C9 MTE 501 A 1 
HETATM 12 C C10 MTE . . . B 2 8.047 22.526 -5.411 1 31.64 ? C10 MTE 501 A 1 
HETATM 13 C C1' MTE . . . B 2 7.057 20.329 -1.904 1 29.36 ? C1' MTE 501 A 1 
HETATM 14 S S1' MTE . . . B 2 8.109 19.65 -0.753 1 30.45 ? S1' MTE 501 A 1 
HETATM 15 C C2' MTE . . . B 2 5.726 20.27 -1.776 1 30.94 ? C2' MTE 501 A 1 
HETATM 16 S S2' MTE . . . B 2 5.007 19.469 -0.464 1 29.56 ? S2' MTE 501 A 1 
HETATM 17 C C3' MTE . . . B 2 4.786 20.853 -2.829 1 30.93 ? C3' MTE 501 A 1 
HETATM 18 O O3' MTE . . . B 2 5.495 21.542 -3.851 1 30.72 ? O3' MTE 501 A 1 
HETATM 19 C C4' MTE . . . B 2 3.802 21.832 -2.214 1 30.13 ? C4' MTE 501 A 1 
HETATM 20 O O4' MTE . . . B 2 2.942 22.362 -3.223 1 33.03 ? O4' MTE 501 A 1 
HETATM 21 P P MTE . . . B 2 1.952 23.58 -2.851 1 34.14 ? P MTE 501 A 1 
HETATM 22 O O1P MTE . . . B 2 2.884 24.666 -2.349 1 34.19 ? O1P MTE 501 A 1 
HETATM 23 O O2P MTE . . . B 2 1.039 22.973 -1.817 1 33.9 ? O2P MTE 501 A 1 
HETATM 24 O O3P MTE . . . B 2 1.236 23.953 -4.114 1 35.13 ? O3P MTE 501 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           24 
#