data_3HCD # _model_server_result.job_id mjEZCp1KUpLnaQG-4S_wcA _model_server_result.datetime_utc '2024-11-06 09:21:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 3HCD # _exptl.entry_id 3HCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 169.178 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-NOREPINEPHRINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HCD _cell.length_a 93.649 _cell.length_b 93.649 _cell.length_c 187.289 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 48 A CYS 48 1_555 B SG CYS 139 B CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 139 A CYS 139 1_555 B SG CYS 48 B CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C8 H11 N O3' _chem_comp.formula_weight 169.178 _chem_comp.id LNR _chem_comp.mon_nstd_flag . _chem_comp.name L-NOREPINEPHRINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NORADRENALINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ OAC LNR sing 194 n n OAC HOAC LNR sing 195 n n CAG CAJ LNR doub 196 n y CAJ CAI LNR sing 197 n y CAK CAG LNR sing 198 n y CAG HAG LNR sing 199 n n CAE CAI LNR doub 200 n y CAI OAB LNR sing 201 n n OAB HOAB LNR sing 202 n n CAF CAE LNR sing 203 n y CAE HAE LNR sing 204 n n CAK CAF LNR doub 205 n y CAF HAF LNR sing 206 n n CAL CAK LNR sing 207 n n CAH CAL LNR sing 208 n n OAD CAL LNR sing 209 n n CAL HAL LNR sing 210 n n OAD HOAD LNR sing 211 n n NAA CAH LNR sing 212 n n CAH HAH LNR sing 213 n n CAH HAHA LNR sing 214 n n NAA HNAA LNR sing 215 n n NAA HNAB LNR sing 216 n n # _atom_sites.entry_id 3HCD _atom_sites.fract_transf_matrix[1][1] 0.010678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010678 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 3001 3001 SAH SAH . D 3 LNR A 1 2001 2001 LNR LT4 . E 2 SAH B 1 3002 3002 SAH SAH . F 3 LNR B 1 2002 2002 LNR LT4 . G 4 HOH A 1 290 290 HOH HOH . G 4 HOH A 2 291 291 HOH HOH . G 4 HOH A 3 292 292 HOH HOH . G 4 HOH A 4 293 293 HOH HOH . G 4 HOH A 5 294 294 HOH HOH . G 4 HOH A 6 295 295 HOH HOH . G 4 HOH A 7 296 296 HOH HOH . G 4 HOH A 8 297 297 HOH HOH . G 4 HOH A 9 298 298 HOH HOH . G 4 HOH A 10 299 299 HOH HOH . G 4 HOH A 11 300 300 HOH HOH . G 4 HOH A 12 301 301 HOH HOH . G 4 HOH A 13 302 302 HOH HOH . G 4 HOH A 14 303 303 HOH HOH . G 4 HOH A 15 304 304 HOH HOH . G 4 HOH A 16 305 305 HOH HOH . G 4 HOH A 17 306 306 HOH HOH . G 4 HOH A 18 307 307 HOH HOH . G 4 HOH A 19 308 308 HOH HOH . G 4 HOH A 20 309 309 HOH HOH . G 4 HOH A 21 310 310 HOH HOH . G 4 HOH A 22 311 311 HOH HOH . G 4 HOH A 23 312 312 HOH HOH . G 4 HOH A 24 313 313 HOH HOH . G 4 HOH A 25 314 314 HOH HOH . G 4 HOH A 26 316 316 HOH HOH . G 4 HOH A 27 317 317 HOH HOH . G 4 HOH A 28 318 318 HOH HOH . G 4 HOH A 29 320 320 HOH HOH . G 4 HOH A 30 321 321 HOH HOH . G 4 HOH A 31 322 322 HOH HOH . G 4 HOH A 32 323 323 HOH HOH . G 4 HOH A 33 324 324 HOH HOH . G 4 HOH A 34 325 325 HOH HOH . G 4 HOH A 35 326 326 HOH HOH . G 4 HOH A 36 327 327 HOH HOH . G 4 HOH A 37 328 328 HOH HOH . G 4 HOH A 38 329 329 HOH HOH . G 4 HOH A 39 330 330 HOH HOH . G 4 HOH A 40 331 331 HOH HOH . G 4 HOH A 41 332 332 HOH HOH . G 4 HOH A 42 333 333 HOH HOH . G 4 HOH A 43 334 334 HOH HOH . G 4 HOH A 44 335 335 HOH HOH . G 4 HOH A 45 336 336 HOH HOH . G 4 HOH A 46 337 337 HOH HOH . G 4 HOH A 47 338 338 HOH HOH . G 4 HOH A 48 393 393 HOH HOH . G 4 HOH A 49 394 394 HOH HOH . G 4 HOH A 50 395 395 HOH HOH . G 4 HOH A 51 396 396 HOH HOH . G 4 HOH A 52 397 397 HOH HOH . G 4 HOH A 53 398 398 HOH HOH . G 4 HOH A 54 399 399 HOH HOH . G 4 HOH A 55 400 400 HOH HOH . G 4 HOH A 56 401 401 HOH HOH . G 4 HOH A 57 402 402 HOH HOH . G 4 HOH A 58 403 403 HOH HOH . G 4 HOH A 59 404 404 HOH HOH . G 4 HOH A 60 405 405 HOH HOH . G 4 HOH A 61 406 406 HOH HOH . G 4 HOH A 62 407 407 HOH HOH . G 4 HOH A 63 408 408 HOH HOH . G 4 HOH A 64 409 409 HOH HOH . G 4 HOH A 65 410 410 HOH HOH . G 4 HOH A 66 423 423 HOH HOH . G 4 HOH A 67 425 425 HOH HOH . G 4 HOH A 68 431 431 HOH HOH . G 4 HOH A 69 432 432 HOH HOH . G 4 HOH A 70 435 435 HOH HOH . G 4 HOH A 71 436 436 HOH HOH . G 4 HOH A 72 437 437 HOH HOH . G 4 HOH A 73 441 441 HOH HOH . G 4 HOH A 74 442 442 HOH HOH . G 4 HOH A 75 443 443 HOH HOH . G 4 HOH A 76 444 444 HOH HOH . G 4 HOH A 77 447 447 HOH HOH . G 4 HOH A 78 451 451 HOH HOH . G 4 HOH A 79 452 452 HOH HOH . G 4 HOH A 80 454 454 HOH HOH . G 4 HOH A 81 456 456 HOH HOH . G 4 HOH A 82 458 458 HOH HOH . G 4 HOH A 83 461 461 HOH HOH . G 4 HOH A 84 462 462 HOH HOH . G 4 HOH A 85 464 464 HOH HOH . G 4 HOH A 86 465 465 HOH HOH . G 4 HOH A 87 466 466 HOH HOH . G 4 HOH A 88 468 468 HOH HOH . G 4 HOH A 89 470 470 HOH HOH . G 4 HOH A 90 472 472 HOH HOH . G 4 HOH A 91 473 473 HOH HOH . G 4 HOH A 92 474 474 HOH HOH . G 4 HOH A 93 478 478 HOH HOH . G 4 HOH A 94 479 479 HOH HOH . G 4 HOH A 95 480 480 HOH HOH . G 4 HOH A 96 483 483 HOH HOH . G 4 HOH A 97 484 484 HOH HOH . G 4 HOH A 98 485 485 HOH HOH . G 4 HOH A 99 487 487 HOH HOH . G 4 HOH A 100 488 488 HOH HOH . G 4 HOH A 101 489 489 HOH HOH . G 4 HOH A 102 491 491 HOH HOH . G 4 HOH A 103 497 497 HOH HOH . G 4 HOH A 104 500 500 HOH HOH . G 4 HOH A 105 504 504 HOH HOH . G 4 HOH A 106 506 506 HOH HOH . G 4 HOH A 107 508 508 HOH HOH . G 4 HOH A 108 511 511 HOH HOH . G 4 HOH A 109 517 517 HOH HOH . G 4 HOH A 110 518 518 HOH HOH . G 4 HOH A 111 520 520 HOH HOH . G 4 HOH A 112 522 522 HOH HOH . G 4 HOH A 113 523 523 HOH HOH . G 4 HOH A 114 526 526 HOH HOH . H 4 HOH B 1 315 315 HOH HOH . H 4 HOH B 2 319 319 HOH HOH . H 4 HOH B 3 339 339 HOH HOH . H 4 HOH B 4 340 340 HOH HOH . H 4 HOH B 5 341 341 HOH HOH . H 4 HOH B 6 342 342 HOH HOH . H 4 HOH B 7 343 343 HOH HOH . H 4 HOH B 8 344 344 HOH HOH . H 4 HOH B 9 345 345 HOH HOH . H 4 HOH B 10 346 346 HOH HOH . H 4 HOH B 11 347 347 HOH HOH . H 4 HOH B 12 348 348 HOH HOH . H 4 HOH B 13 349 349 HOH HOH . H 4 HOH B 14 350 350 HOH HOH . H 4 HOH B 15 351 351 HOH HOH . H 4 HOH B 16 352 352 HOH HOH . H 4 HOH B 17 353 353 HOH HOH . H 4 HOH B 18 354 354 HOH HOH . H 4 HOH B 19 355 355 HOH HOH . H 4 HOH B 20 356 356 HOH HOH . H 4 HOH B 21 357 357 HOH HOH . H 4 HOH B 22 358 358 HOH HOH . H 4 HOH B 23 359 359 HOH HOH . H 4 HOH B 24 360 360 HOH HOH . H 4 HOH B 25 361 361 HOH HOH . H 4 HOH B 26 362 362 HOH HOH . H 4 HOH B 27 363 363 HOH HOH . H 4 HOH B 28 364 364 HOH HOH . H 4 HOH B 29 365 365 HOH HOH . H 4 HOH B 30 366 366 HOH HOH . H 4 HOH B 31 367 367 HOH HOH . H 4 HOH B 32 368 368 HOH HOH . H 4 HOH B 33 369 369 HOH HOH . H 4 HOH B 34 370 370 HOH HOH . H 4 HOH B 35 371 371 HOH HOH . H 4 HOH B 36 372 372 HOH HOH . H 4 HOH B 37 373 373 HOH HOH . H 4 HOH B 38 374 374 HOH HOH . H 4 HOH B 39 375 375 HOH HOH . H 4 HOH B 40 376 376 HOH HOH . H 4 HOH B 41 377 377 HOH HOH . H 4 HOH B 42 378 378 HOH HOH . H 4 HOH B 43 379 379 HOH HOH . H 4 HOH B 44 380 380 HOH HOH . H 4 HOH B 45 381 381 HOH HOH . H 4 HOH B 46 382 382 HOH HOH . H 4 HOH B 47 383 383 HOH HOH . H 4 HOH B 48 384 384 HOH HOH . H 4 HOH B 49 385 385 HOH HOH . H 4 HOH B 50 386 386 HOH HOH . H 4 HOH B 51 387 387 HOH HOH . H 4 HOH B 52 388 388 HOH HOH . H 4 HOH B 53 389 389 HOH HOH . H 4 HOH B 54 390 390 HOH HOH . H 4 HOH B 55 391 391 HOH HOH . H 4 HOH B 56 392 392 HOH HOH . H 4 HOH B 57 411 411 HOH HOH . H 4 HOH B 58 412 412 HOH HOH . H 4 HOH B 59 413 413 HOH HOH . H 4 HOH B 60 414 414 HOH HOH . H 4 HOH B 61 415 415 HOH HOH . H 4 HOH B 62 416 416 HOH HOH . H 4 HOH B 63 417 417 HOH HOH . H 4 HOH B 64 418 418 HOH HOH . H 4 HOH B 65 419 419 HOH HOH . H 4 HOH B 66 420 420 HOH HOH . H 4 HOH B 67 421 421 HOH HOH . H 4 HOH B 68 422 422 HOH HOH . H 4 HOH B 69 424 424 HOH HOH . H 4 HOH B 70 426 426 HOH HOH . H 4 HOH B 71 427 427 HOH HOH . H 4 HOH B 72 428 428 HOH HOH . H 4 HOH B 73 429 429 HOH HOH . H 4 HOH B 74 430 430 HOH HOH . H 4 HOH B 75 433 433 HOH HOH . H 4 HOH B 76 434 434 HOH HOH . H 4 HOH B 77 438 438 HOH HOH . H 4 HOH B 78 439 439 HOH HOH . H 4 HOH B 79 440 440 HOH HOH . H 4 HOH B 80 445 445 HOH HOH . H 4 HOH B 81 446 446 HOH HOH . H 4 HOH B 82 448 448 HOH HOH . H 4 HOH B 83 449 449 HOH HOH . H 4 HOH B 84 450 450 HOH HOH . H 4 HOH B 85 453 453 HOH HOH . H 4 HOH B 86 455 455 HOH HOH . H 4 HOH B 87 457 457 HOH HOH . H 4 HOH B 88 459 459 HOH HOH . H 4 HOH B 89 460 460 HOH HOH . H 4 HOH B 90 463 463 HOH HOH . H 4 HOH B 91 467 467 HOH HOH . H 4 HOH B 92 469 469 HOH HOH . H 4 HOH B 93 471 471 HOH HOH . H 4 HOH B 94 475 475 HOH HOH . H 4 HOH B 95 476 476 HOH HOH . H 4 HOH B 96 477 477 HOH HOH . H 4 HOH B 97 481 481 HOH HOH . H 4 HOH B 98 482 482 HOH HOH . H 4 HOH B 99 486 486 HOH HOH . H 4 HOH B 100 490 490 HOH HOH . H 4 HOH B 101 492 492 HOH HOH . H 4 HOH B 102 493 493 HOH HOH . H 4 HOH B 103 494 494 HOH HOH . H 4 HOH B 104 495 495 HOH HOH . H 4 HOH B 105 496 496 HOH HOH . H 4 HOH B 106 498 498 HOH HOH . H 4 HOH B 107 499 499 HOH HOH . H 4 HOH B 108 501 501 HOH HOH . H 4 HOH B 109 502 502 HOH HOH . H 4 HOH B 110 503 503 HOH HOH . H 4 HOH B 111 505 505 HOH HOH . H 4 HOH B 112 507 507 HOH HOH . H 4 HOH B 113 509 509 HOH HOH . H 4 HOH B 114 510 510 HOH HOH . H 4 HOH B 115 512 512 HOH HOH . H 4 HOH B 116 513 513 HOH HOH . H 4 HOH B 117 514 514 HOH HOH . H 4 HOH B 118 515 515 HOH HOH . H 4 HOH B 119 516 516 HOH HOH . H 4 HOH B 120 519 519 HOH HOH . H 4 HOH B 121 521 521 HOH HOH . H 4 HOH B 122 524 524 HOH HOH . H 4 HOH B 123 525 525 HOH HOH . H 4 HOH B 124 527 527 HOH HOH . H 4 HOH B 125 528 528 HOH HOH . H 4 HOH B 126 529 529 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC LNR . . . D 3 27.958 45.924 15.159 1 54.22 ? OAC LNR 2001 A 1 HETATM 2 C CAJ LNR . . . D 3 28.127 44.827 16.022 1 52.36 ? CAJ LNR 2001 A 1 HETATM 3 C CAG LNR . . . D 3 28.552 44.968 17.345 1 46.22 ? CAG LNR 2001 A 1 HETATM 4 C CAI LNR . . . D 3 27.828 43.561 15.533 1 52.7 ? CAI LNR 2001 A 1 HETATM 5 O OAB LNR . . . D 3 27.494 43.386 14.198 1 49.05 ? OAB LNR 2001 A 1 HETATM 6 C CAE LNR . . . D 3 27.943 42.429 16.324 1 51.54 ? CAE LNR 2001 A 1 HETATM 7 C CAF LNR . . . D 3 28.357 42.566 17.636 1 49.02 ? CAF LNR 2001 A 1 HETATM 8 C CAK LNR . . . D 3 28.668 43.824 18.151 1 49.96 ? CAK LNR 2001 A 1 HETATM 9 C CAL LNR . . . D 3 29.079 43.924 19.631 1 50.86 ? CAL LNR 2001 A 1 HETATM 10 O OAD LNR . . . D 3 30.422 43.604 19.874 1 49 ? OAD LNR 2001 A 1 HETATM 11 C CAH LNR . . . D 3 28.756 45.315 20.16 1 49.87 ? CAH LNR 2001 A 1 HETATM 12 N NAA LNR . . . D 3 29.507 45.556 21.374 1 53.61 ? NAA LNR 2001 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #