data_3HEG # _model_server_result.job_id 2mvtnxQI6ExIEmx7Xk4S9Q _model_server_result.datetime_utc '2025-02-18 16:13:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3heg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3HEG # _exptl.entry_id 3HEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 464.825 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HEG _cell.length_a 65.492 _cell.length_b 74.249 _cell.length_c 77.843 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H16 Cl F3 N4 O3' _chem_comp.formula_weight 464.825 _chem_comp.id BAX _chem_comp.mon_nstd_flag . _chem_comp.name 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Sorafenib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BAX doub 70 n y C1 C6 BAX sing 71 n y C1 H1 BAX sing 72 n n C2 C3 BAX sing 73 n y C2 N12 BAX sing 74 n n C3 C4 BAX doub 75 n y C3 H3 BAX sing 76 n n C4 C5 BAX sing 77 n y C4 H4 BAX sing 78 n n C13 N12 BAX sing 79 n n C13 N14 BAX sing 80 n n C13 O15 BAX doub 81 n n C16 C17 BAX doub 82 n y C16 C21 BAX sing 83 n y C16 N14 BAX sing 84 n n C17 C18 BAX sing 85 n y C17 H17 BAX sing 86 n n C18 C19 BAX doub 87 n y C18 H18 BAX sing 88 n n C19 C20 BAX sing 89 n y C19 O22 BAX sing 90 n n C20 C21 BAX doub 91 n y C20 H20 BAX sing 92 n n C21 H21 BAX sing 93 n n O22 C23 BAX sing 94 n n C24 C25 BAX doub 95 n y C24 C23 BAX sing 96 n y C24 H24 BAX sing 97 n n C25 N26 BAX sing 98 n y C25 H25 BAX sing 99 n n C27 C28 BAX sing 100 n y C27 N26 BAX doub 101 n y C27 C29 BAX sing 102 n n C28 C23 BAX doub 103 n y C28 H28 BAX sing 104 n n N30 C31 BAX sing 105 n n N30 C29 BAX sing 106 n n N30 H30 BAX sing 107 n n C31 H311 BAX sing 108 n n C31 H312 BAX sing 109 n n C31 H313 BAX sing 110 n n C5 C6 BAX doub 111 n y C5 CL11 BAX sing 112 n n C6 C7 BAX sing 113 n n C7 F8 BAX sing 114 n n C7 F9 BAX sing 115 n n C7 F10 BAX sing 116 n n N12 H12 BAX sing 117 n n N14 H14 BAX sing 118 n n C29 O32 BAX doub 119 n n # _atom_sites.entry_id 3HEG _atom_sites.fract_transf_matrix[1][1] 0.015269 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013468 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012846 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BAX A 1 1 1 BAX BAX . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 353 5 HOH HOH . C 3 HOH A 5 354 6 HOH HOH . C 3 HOH A 6 355 7 HOH HOH . C 3 HOH A 7 356 8 HOH HOH . C 3 HOH A 8 357 9 HOH HOH . C 3 HOH A 9 358 10 HOH HOH . C 3 HOH A 10 359 11 HOH HOH . C 3 HOH A 11 360 12 HOH HOH . C 3 HOH A 12 361 14 HOH HOH . C 3 HOH A 13 362 15 HOH HOH . C 3 HOH A 14 363 16 HOH HOH . C 3 HOH A 15 364 17 HOH HOH . C 3 HOH A 16 365 18 HOH HOH . C 3 HOH A 17 366 19 HOH HOH . C 3 HOH A 18 367 21 HOH HOH . C 3 HOH A 19 368 22 HOH HOH . C 3 HOH A 20 369 23 HOH HOH . C 3 HOH A 21 370 24 HOH HOH . C 3 HOH A 22 371 26 HOH HOH . C 3 HOH A 23 372 27 HOH HOH . C 3 HOH A 24 373 28 HOH HOH . C 3 HOH A 25 374 29 HOH HOH . C 3 HOH A 26 375 31 HOH HOH . C 3 HOH A 27 376 33 HOH HOH . C 3 HOH A 28 377 34 HOH HOH . C 3 HOH A 29 378 35 HOH HOH . C 3 HOH A 30 379 36 HOH HOH . C 3 HOH A 31 380 38 HOH HOH . C 3 HOH A 32 381 39 HOH HOH . C 3 HOH A 33 382 40 HOH HOH . C 3 HOH A 34 383 41 HOH HOH . C 3 HOH A 35 384 42 HOH HOH . C 3 HOH A 36 385 43 HOH HOH . C 3 HOH A 37 386 44 HOH HOH . C 3 HOH A 38 387 45 HOH HOH . C 3 HOH A 39 388 46 HOH HOH . C 3 HOH A 40 389 48 HOH HOH . C 3 HOH A 41 390 49 HOH HOH . C 3 HOH A 42 391 50 HOH HOH . C 3 HOH A 43 392 51 HOH HOH . C 3 HOH A 44 393 52 HOH HOH . C 3 HOH A 45 394 53 HOH HOH . C 3 HOH A 46 395 54 HOH HOH . C 3 HOH A 47 396 55 HOH HOH . C 3 HOH A 48 397 56 HOH HOH . C 3 HOH A 49 398 57 HOH HOH . C 3 HOH A 50 399 58 HOH HOH . C 3 HOH A 51 400 59 HOH HOH . C 3 HOH A 52 401 60 HOH HOH . C 3 HOH A 53 402 61 HOH HOH . C 3 HOH A 54 403 62 HOH HOH . C 3 HOH A 55 404 63 HOH HOH . C 3 HOH A 56 405 64 HOH HOH . C 3 HOH A 57 406 65 HOH HOH . C 3 HOH A 58 407 66 HOH HOH . C 3 HOH A 59 408 67 HOH HOH . C 3 HOH A 60 409 69 HOH HOH . C 3 HOH A 61 410 71 HOH HOH . C 3 HOH A 62 411 72 HOH HOH . C 3 HOH A 63 412 73 HOH HOH . C 3 HOH A 64 413 76 HOH HOH . C 3 HOH A 65 414 77 HOH HOH . C 3 HOH A 66 415 78 HOH HOH . C 3 HOH A 67 416 79 HOH HOH . C 3 HOH A 68 417 80 HOH HOH . C 3 HOH A 69 418 81 HOH HOH . C 3 HOH A 70 419 86 HOH HOH . C 3 HOH A 71 420 92 HOH HOH . C 3 HOH A 72 421 93 HOH HOH . C 3 HOH A 73 422 94 HOH HOH . C 3 HOH A 74 423 95 HOH HOH . C 3 HOH A 75 424 96 HOH HOH . C 3 HOH A 76 425 97 HOH HOH . C 3 HOH A 77 426 98 HOH HOH . C 3 HOH A 78 427 99 HOH HOH . C 3 HOH A 79 428 100 HOH HOH . C 3 HOH A 80 429 101 HOH HOH . C 3 HOH A 81 430 102 HOH HOH . C 3 HOH A 82 431 103 HOH HOH . C 3 HOH A 83 432 104 HOH HOH . C 3 HOH A 84 433 105 HOH HOH . C 3 HOH A 85 434 106 HOH HOH . C 3 HOH A 86 435 107 HOH HOH . C 3 HOH A 87 436 108 HOH HOH . C 3 HOH A 88 437 109 HOH HOH . C 3 HOH A 89 438 110 HOH HOH . C 3 HOH A 90 439 111 HOH HOH . C 3 HOH A 91 440 112 HOH HOH . C 3 HOH A 92 441 113 HOH HOH . C 3 HOH A 93 442 114 HOH HOH . C 3 HOH A 94 443 115 HOH HOH . C 3 HOH A 95 444 116 HOH HOH . C 3 HOH A 96 445 117 HOH HOH . C 3 HOH A 97 446 118 HOH HOH . C 3 HOH A 98 447 119 HOH HOH . C 3 HOH A 99 448 120 HOH HOH . C 3 HOH A 100 449 121 HOH HOH . C 3 HOH A 101 450 122 HOH HOH . C 3 HOH A 102 451 123 HOH HOH . C 3 HOH A 103 452 124 HOH HOH . C 3 HOH A 104 453 125 HOH HOH . C 3 HOH A 105 454 126 HOH HOH . C 3 HOH A 106 455 127 HOH HOH . C 3 HOH A 107 456 128 HOH HOH . C 3 HOH A 108 457 129 HOH HOH . C 3 HOH A 109 458 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BAX . . . B 2 -1.978 2.259 25.948 1 25.24 ? C1 BAX 1 A 1 HETATM 2 C C2 BAX . . . B 2 -1.228 3.428 25.857 1 22.79 ? C2 BAX 1 A 1 HETATM 3 C C3 BAX . . . B 2 -1.698 4.591 26.452 1 25.65 ? C3 BAX 1 A 1 HETATM 4 C C4 BAX . . . B 2 -2.92 4.66 27.1 1 23.52 ? C4 BAX 1 A 1 HETATM 5 C C13 BAX . . . B 2 0.448 2.704 24.285 1 27.05 ? C13 BAX 1 A 1 HETATM 6 C C16 BAX . . . B 2 2.338 2.378 22.9 1 30.36 ? C16 BAX 1 A 1 HETATM 7 C C17 BAX . . . B 2 1.656 2.271 21.665 1 31.76 ? C17 BAX 1 A 1 HETATM 8 C C18 BAX . . . B 2 2.333 1.822 20.527 1 33.19 ? C18 BAX 1 A 1 HETATM 9 C C19 BAX . . . B 2 3.707 1.491 20.634 1 32.99 ? C19 BAX 1 A 1 HETATM 10 C C20 BAX . . . B 2 4.382 1.594 21.851 1 29.05 ? C20 BAX 1 A 1 HETATM 11 C C21 BAX . . . B 2 3.692 2.044 22.967 1 29.27 ? C21 BAX 1 A 1 HETATM 12 O O22 BAX . . . B 2 4.464 1.088 19.562 1 36.29 ? O22 BAX 1 A 1 HETATM 13 C C24 BAX . . . B 2 3.713 -1.029 18.888 1 38.31 ? C24 BAX 1 A 1 HETATM 14 C C25 BAX . . . B 2 3.417 -1.928 17.863 1 41.85 ? C25 BAX 1 A 1 HETATM 15 C C27 BAX . . . B 2 4.041 -0.309 16.236 1 38.7 ? C27 BAX 1 A 1 HETATM 16 C C28 BAX . . . B 2 4.328 0.623 17.229 1 34.62 ? C28 BAX 1 A 1 HETATM 17 N N30 BAX . . . B 2 4.101 -1.034 13.892 1 45.15 ? N30 BAX 1 A 1 HETATM 18 C C31 BAX . . . B 2 3.253 -1.004 12.705 1 44.89 ? C31 BAX 1 A 1 HETATM 19 C C5 BAX . . . B 2 -3.71 3.535 27.168 1 23.46 ? C5 BAX 1 A 1 HETATM 20 C C6 BAX . . . B 2 -3.219 2.265 26.584 1 25.07 ? C6 BAX 1 A 1 HETATM 21 C C7 BAX . . . B 2 -4.05 0.997 26.698 1 22.96 ? C7 BAX 1 A 1 HETATM 22 F F8 BAX . . . B 2 -5.238 1.142 26.211 1 24.28 ? F8 BAX 1 A 1 HETATM 23 F F9 BAX . . . B 2 -3.48 0.001 26.122 1 18.78 ? F9 BAX 1 A 1 HETATM 24 F F10 BAX . . . B 2 -4.225 0.649 27.928 1 21.9 ? F10 BAX 1 A 1 HETATM 25 CL CL11 BAX . . . B 2 -5.276 3.599 28.042 1 25.86 ? CL11 BAX 1 A 1 HETATM 26 N N12 BAX . . . B 2 -0.022 3.487 25.264 1 23.16 ? N12 BAX 1 A 1 HETATM 27 N N14 BAX . . . B 2 1.748 2.809 24.051 1 27.95 ? N14 BAX 1 A 1 HETATM 28 O O15 BAX . . . B 2 -0.262 1.946 23.616 1 24.59 ? O15 BAX 1 A 1 HETATM 29 C C23 BAX . . . B 2 4.155 0.236 18.558 1 35.36 ? C23 BAX 1 A 1 HETATM 30 N N26 BAX . . . B 2 3.581 -1.537 16.578 1 42.06 ? N26 BAX 1 A 1 HETATM 31 C C29 BAX . . . B 2 4.131 0 14.762 1 43.08 ? C29 BAX 1 A 1 HETATM 32 O O32 BAX . . . B 2 4.155 1.173 14.391 1 42.53 ? O32 BAX 1 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #