data_3HEP # _model_server_result.job_id toBMUAWwSEjmAPFmHmK7dA _model_server_result.datetime_utc '2024-10-19 22:25:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":156}' # _entry.id 3HEP # _exptl.entry_id 3HEP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRITE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HEP _cell.length_a 30.389 _cell.length_b 119.39 _cell.length_c 57.155 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc2 B FE HEM . A HEM 154 1_555 C N NO2 . A NO2 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? # _chem_comp.formula 'N O2 -1' _chem_comp.formula_weight 46.005 _chem_comp.id NO2 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO2 doub 306 n n N O2 NO2 sing 307 n n # _atom_sites.entry_id 3HEP _atom_sites.fract_transf_matrix[1][1] 0.032906 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 154 154 HEM HEM . C 3 NO2 A 1 155 1 NO2 NO2 . D 3 NO2 A 1 156 2 NO2 NO2 . E 4 HOH A 1 157 1 HOH HOH . E 4 HOH A 2 158 2 HOH HOH . E 4 HOH A 3 159 3 HOH HOH . E 4 HOH A 4 160 4 HOH HOH . E 4 HOH A 5 161 5 HOH HOH . E 4 HOH A 6 162 6 HOH HOH . E 4 HOH A 7 163 7 HOH HOH . E 4 HOH A 8 164 8 HOH HOH . E 4 HOH A 9 165 9 HOH HOH . E 4 HOH A 10 166 10 HOH HOH . E 4 HOH A 11 167 11 HOH HOH . E 4 HOH A 12 168 12 HOH HOH . E 4 HOH A 13 169 13 HOH HOH . E 4 HOH A 14 170 14 HOH HOH . E 4 HOH A 15 171 15 HOH HOH . E 4 HOH A 16 172 16 HOH HOH . E 4 HOH A 17 173 17 HOH HOH . E 4 HOH A 18 174 18 HOH HOH . E 4 HOH A 19 175 19 HOH HOH . E 4 HOH A 20 176 20 HOH HOH . E 4 HOH A 21 177 21 HOH HOH . E 4 HOH A 22 178 22 HOH HOH . E 4 HOH A 23 179 23 HOH HOH . E 4 HOH A 24 180 24 HOH HOH . E 4 HOH A 25 181 25 HOH HOH . E 4 HOH A 26 182 26 HOH HOH . E 4 HOH A 27 183 27 HOH HOH . E 4 HOH A 28 184 28 HOH HOH . E 4 HOH A 29 185 29 HOH HOH . E 4 HOH A 30 186 30 HOH HOH . E 4 HOH A 31 187 31 HOH HOH . E 4 HOH A 32 188 32 HOH HOH . E 4 HOH A 33 189 33 HOH HOH . E 4 HOH A 34 190 34 HOH HOH . E 4 HOH A 35 191 35 HOH HOH . E 4 HOH A 36 192 36 HOH HOH . E 4 HOH A 37 193 37 HOH HOH . E 4 HOH A 38 194 38 HOH HOH . E 4 HOH A 39 195 39 HOH HOH . E 4 HOH A 40 196 40 HOH HOH . E 4 HOH A 41 197 41 HOH HOH . E 4 HOH A 42 198 42 HOH HOH . E 4 HOH A 43 199 43 HOH HOH . E 4 HOH A 44 200 44 HOH HOH . E 4 HOH A 45 201 45 HOH HOH . E 4 HOH A 46 202 46 HOH HOH . E 4 HOH A 47 203 47 HOH HOH . E 4 HOH A 48 204 48 HOH HOH . E 4 HOH A 49 205 49 HOH HOH . E 4 HOH A 50 206 50 HOH HOH . E 4 HOH A 51 207 51 HOH HOH . E 4 HOH A 52 208 52 HOH HOH . E 4 HOH A 53 209 53 HOH HOH . E 4 HOH A 54 210 54 HOH HOH . E 4 HOH A 55 211 55 HOH HOH . E 4 HOH A 56 212 56 HOH HOH . E 4 HOH A 57 213 57 HOH HOH . E 4 HOH A 58 214 58 HOH HOH . E 4 HOH A 59 215 59 HOH HOH . E 4 HOH A 60 216 60 HOH HOH . E 4 HOH A 61 217 61 HOH HOH . E 4 HOH A 62 218 62 HOH HOH . E 4 HOH A 63 219 63 HOH HOH . E 4 HOH A 64 220 64 HOH HOH . E 4 HOH A 65 221 65 HOH HOH . E 4 HOH A 66 222 66 HOH HOH . E 4 HOH A 67 223 67 HOH HOH . E 4 HOH A 68 224 68 HOH HOH . E 4 HOH A 69 225 69 HOH HOH . E 4 HOH A 70 226 70 HOH HOH . E 4 HOH A 71 227 71 HOH HOH . E 4 HOH A 72 228 72 HOH HOH . E 4 HOH A 73 229 73 HOH HOH . E 4 HOH A 74 230 74 HOH HOH . E 4 HOH A 75 231 75 HOH HOH . E 4 HOH A 76 232 76 HOH HOH . E 4 HOH A 77 233 77 HOH HOH . E 4 HOH A 78 234 78 HOH HOH . E 4 HOH A 79 235 79 HOH HOH . E 4 HOH A 80 236 80 HOH HOH . E 4 HOH A 81 237 81 HOH HOH . E 4 HOH A 82 238 82 HOH HOH . E 4 HOH A 83 239 83 HOH HOH . E 4 HOH A 84 240 84 HOH HOH . E 4 HOH A 85 241 85 HOH HOH . E 4 HOH A 86 242 86 HOH HOH . E 4 HOH A 87 243 87 HOH HOH . E 4 HOH A 88 244 88 HOH HOH . E 4 HOH A 89 245 89 HOH HOH . E 4 HOH A 90 246 90 HOH HOH . E 4 HOH A 91 247 91 HOH HOH . E 4 HOH A 92 248 92 HOH HOH . E 4 HOH A 93 249 93 HOH HOH . E 4 HOH A 94 250 94 HOH HOH . E 4 HOH A 95 251 95 HOH HOH . E 4 HOH A 96 252 96 HOH HOH . E 4 HOH A 97 253 97 HOH HOH . E 4 HOH A 98 254 98 HOH HOH . E 4 HOH A 99 255 99 HOH HOH . E 4 HOH A 100 256 100 HOH HOH . E 4 HOH A 101 257 101 HOH HOH . E 4 HOH A 102 258 102 HOH HOH . E 4 HOH A 103 259 103 HOH HOH . E 4 HOH A 104 260 104 HOH HOH . E 4 HOH A 105 261 105 HOH HOH . E 4 HOH A 106 262 106 HOH HOH . E 4 HOH A 107 263 107 HOH HOH . E 4 HOH A 108 264 108 HOH HOH . E 4 HOH A 109 265 109 HOH HOH . E 4 HOH A 110 266 110 HOH HOH . E 4 HOH A 111 267 111 HOH HOH . E 4 HOH A 112 268 112 HOH HOH . E 4 HOH A 113 269 113 HOH HOH . E 4 HOH A 114 270 114 HOH HOH . E 4 HOH A 115 271 115 HOH HOH . E 4 HOH A 116 272 116 HOH HOH . E 4 HOH A 117 273 117 HOH HOH . E 4 HOH A 118 274 118 HOH HOH . E 4 HOH A 119 275 119 HOH HOH . E 4 HOH A 120 276 120 HOH HOH . E 4 HOH A 121 277 121 HOH HOH . E 4 HOH A 122 278 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO2 . . . D 3 1.337 17.065 -13.323 1 34.92 ? N NO2 156 A 1 HETATM 2 O O1 NO2 . . . D 3 0.376 16.372 -13.688 1 31.47 ? O1 NO2 156 A 1 HETATM 3 O O2 NO2 . . . D 3 2.524 16.815 -13.694 1 37.03 ? O2 NO2 156 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #