data_3HES # _model_server_result.job_id 3VaUEKHC8k1XVlIVT91K6g _model_server_result.datetime_utc '2024-12-23 07:07:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3HES # _exptl.entry_id 3HES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HES _cell.length_a 57.017 _cell.length_b 57.017 _cell.length_c 167.364 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HES _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,C,D,F 1 1 A,E 1 2 A,E 2 1 B,C,D,F 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_545 -x+1/2,y-1/2,-z+3/4 -1 0 0 0 1 0 0 0 -1 28.5085 -28.5085 125.523 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 90 A CYS 179 1_555 A SG CYS 125 A CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf2 B SG CYS 90 B CYS 179 1_555 B SG CYS 125 B CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc1 B ND1 HIS 51 B HIS 140 1_555 D CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc2 B OD1 ASP 58 B ASP 147 1_555 D CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc3 B OD2 ASP 58 B ASP 147 1_555 D CD CD . B CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc4 B NE2 HIS 88 B HIS 177 1_555 C CD CD . B CD 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc5 C CD CD . B CD 300 1_555 F O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc6 D CD CD . B CD 301 1_555 F O HOH . B HOH 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HES _atom_sites.fract_transf_matrix[1][1] 0.017539 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD B 1 300 300 CD CD . D 2 CD B 1 301 301 CD CD . E 3 HOH A 1 302 302 HOH HOH . E 3 HOH A 2 303 303 HOH HOH . E 3 HOH A 3 304 304 HOH HOH . E 3 HOH A 4 305 305 HOH HOH . E 3 HOH A 5 306 306 HOH HOH . E 3 HOH A 6 307 307 HOH HOH . E 3 HOH A 7 308 308 HOH HOH . E 3 HOH A 8 309 309 HOH HOH . E 3 HOH A 9 310 310 HOH HOH . E 3 HOH A 10 311 311 HOH HOH . E 3 HOH A 11 312 312 HOH HOH . E 3 HOH A 12 313 313 HOH HOH . E 3 HOH A 13 314 314 HOH HOH . E 3 HOH A 14 315 315 HOH HOH . E 3 HOH A 15 316 316 HOH HOH . E 3 HOH A 16 317 317 HOH HOH . E 3 HOH A 17 318 318 HOH HOH . E 3 HOH A 18 319 319 HOH HOH . E 3 HOH A 19 320 320 HOH HOH . E 3 HOH A 20 321 321 HOH HOH . E 3 HOH A 21 322 322 HOH HOH . E 3 HOH A 22 323 323 HOH HOH . E 3 HOH A 23 324 324 HOH HOH . E 3 HOH A 24 325 325 HOH HOH . E 3 HOH A 25 326 326 HOH HOH . E 3 HOH A 26 327 327 HOH HOH . E 3 HOH A 27 328 328 HOH HOH . E 3 HOH A 28 329 329 HOH HOH . E 3 HOH A 29 330 330 HOH HOH . E 3 HOH A 30 331 331 HOH HOH . E 3 HOH A 31 332 332 HOH HOH . E 3 HOH A 32 333 333 HOH HOH . E 3 HOH A 33 334 334 HOH HOH . E 3 HOH A 34 335 335 HOH HOH . E 3 HOH A 35 336 336 HOH HOH . E 3 HOH A 36 337 337 HOH HOH . E 3 HOH A 37 338 338 HOH HOH . E 3 HOH A 38 339 339 HOH HOH . E 3 HOH A 39 340 340 HOH HOH . E 3 HOH A 40 341 341 HOH HOH . E 3 HOH A 41 342 342 HOH HOH . E 3 HOH A 42 343 343 HOH HOH . E 3 HOH A 43 344 344 HOH HOH . E 3 HOH A 44 345 345 HOH HOH . E 3 HOH A 45 346 346 HOH HOH . E 3 HOH A 46 347 347 HOH HOH . E 3 HOH A 47 348 348 HOH HOH . E 3 HOH A 48 349 349 HOH HOH . E 3 HOH A 49 350 350 HOH HOH . E 3 HOH A 50 351 351 HOH HOH . E 3 HOH A 51 352 352 HOH HOH . E 3 HOH A 52 353 353 HOH HOH . E 3 HOH A 53 354 354 HOH HOH . E 3 HOH A 54 355 355 HOH HOH . E 3 HOH A 55 356 356 HOH HOH . E 3 HOH A 56 357 357 HOH HOH . E 3 HOH A 57 358 358 HOH HOH . E 3 HOH A 58 359 359 HOH HOH . E 3 HOH A 59 360 360 HOH HOH . E 3 HOH A 60 361 361 HOH HOH . E 3 HOH A 61 362 362 HOH HOH . E 3 HOH A 62 363 363 HOH HOH . E 3 HOH A 63 364 364 HOH HOH . E 3 HOH A 64 365 365 HOH HOH . E 3 HOH A 65 366 366 HOH HOH . E 3 HOH A 66 367 367 HOH HOH . E 3 HOH A 67 368 368 HOH HOH . E 3 HOH A 68 369 369 HOH HOH . E 3 HOH A 69 370 370 HOH HOH . E 3 HOH A 70 371 371 HOH HOH . E 3 HOH A 71 372 372 HOH HOH . E 3 HOH A 72 373 373 HOH HOH . E 3 HOH A 73 374 374 HOH HOH . E 3 HOH A 74 375 375 HOH HOH . E 3 HOH A 75 376 376 HOH HOH . E 3 HOH A 76 377 377 HOH HOH . E 3 HOH A 77 378 378 HOH HOH . E 3 HOH A 78 379 379 HOH HOH . E 3 HOH A 79 380 380 HOH HOH . E 3 HOH A 80 381 381 HOH HOH . E 3 HOH A 81 382 382 HOH HOH . E 3 HOH A 82 383 383 HOH HOH . E 3 HOH A 83 384 384 HOH HOH . E 3 HOH A 84 385 385 HOH HOH . E 3 HOH A 85 386 386 HOH HOH . E 3 HOH A 86 387 387 HOH HOH . E 3 HOH A 87 388 388 HOH HOH . E 3 HOH A 88 389 389 HOH HOH . E 3 HOH A 89 390 390 HOH HOH . E 3 HOH A 90 391 391 HOH HOH . E 3 HOH A 91 392 392 HOH HOH . E 3 HOH A 92 393 393 HOH HOH . E 3 HOH A 93 394 394 HOH HOH . E 3 HOH A 94 395 395 HOH HOH . E 3 HOH A 95 396 396 HOH HOH . E 3 HOH A 96 397 397 HOH HOH . E 3 HOH A 97 398 398 HOH HOH . E 3 HOH A 98 399 399 HOH HOH . E 3 HOH A 99 400 400 HOH HOH . E 3 HOH A 100 401 401 HOH HOH . E 3 HOH A 101 402 402 HOH HOH . E 3 HOH A 102 403 403 HOH HOH . E 3 HOH A 103 404 404 HOH HOH . F 3 HOH B 1 405 405 HOH HOH . F 3 HOH B 2 406 406 HOH HOH . F 3 HOH B 3 407 407 HOH HOH . F 3 HOH B 4 408 408 HOH HOH . F 3 HOH B 5 409 409 HOH HOH . F 3 HOH B 6 410 410 HOH HOH . F 3 HOH B 7 411 411 HOH HOH . F 3 HOH B 8 412 412 HOH HOH . F 3 HOH B 9 413 413 HOH HOH . F 3 HOH B 10 414 414 HOH HOH . F 3 HOH B 11 415 415 HOH HOH . F 3 HOH B 12 416 416 HOH HOH . F 3 HOH B 13 417 417 HOH HOH . F 3 HOH B 14 418 418 HOH HOH . F 3 HOH B 15 419 419 HOH HOH . F 3 HOH B 16 420 420 HOH HOH . F 3 HOH B 17 421 421 HOH HOH . F 3 HOH B 18 422 422 HOH HOH . F 3 HOH B 19 423 423 HOH HOH . F 3 HOH B 20 424 424 HOH HOH . F 3 HOH B 21 425 425 HOH HOH . F 3 HOH B 22 426 426 HOH HOH . F 3 HOH B 23 427 427 HOH HOH . F 3 HOH B 24 428 428 HOH HOH . F 3 HOH B 25 429 429 HOH HOH . F 3 HOH B 26 430 430 HOH HOH . F 3 HOH B 27 431 431 HOH HOH . F 3 HOH B 28 432 432 HOH HOH . F 3 HOH B 29 433 433 HOH HOH . F 3 HOH B 30 434 434 HOH HOH . F 3 HOH B 31 435 435 HOH HOH . F 3 HOH B 32 436 436 HOH HOH . F 3 HOH B 33 437 437 HOH HOH . F 3 HOH B 34 438 438 HOH HOH . F 3 HOH B 35 439 439 HOH HOH . F 3 HOH B 36 440 440 HOH HOH . F 3 HOH B 37 441 441 HOH HOH . F 3 HOH B 38 442 442 HOH HOH . F 3 HOH B 39 443 443 HOH HOH . F 3 HOH B 40 444 444 HOH HOH . F 3 HOH B 41 445 445 HOH HOH . F 3 HOH B 42 446 446 HOH HOH . F 3 HOH B 43 447 447 HOH HOH . F 3 HOH B 44 448 448 HOH HOH . F 3 HOH B 45 449 449 HOH HOH . F 3 HOH B 46 450 450 HOH HOH . F 3 HOH B 47 451 451 HOH HOH . F 3 HOH B 48 452 452 HOH HOH . F 3 HOH B 49 453 453 HOH HOH . F 3 HOH B 50 454 454 HOH HOH . F 3 HOH B 51 455 455 HOH HOH . F 3 HOH B 52 456 456 HOH HOH . F 3 HOH B 53 457 457 HOH HOH . F 3 HOH B 54 458 458 HOH HOH . F 3 HOH B 55 459 459 HOH HOH . F 3 HOH B 56 460 460 HOH HOH . F 3 HOH B 57 461 461 HOH HOH . F 3 HOH B 58 462 462 HOH HOH . F 3 HOH B 59 463 463 HOH HOH . F 3 HOH B 60 464 464 HOH HOH . F 3 HOH B 61 465 465 HOH HOH . F 3 HOH B 62 466 466 HOH HOH . F 3 HOH B 63 467 467 HOH HOH . F 3 HOH B 64 468 468 HOH HOH . F 3 HOH B 65 469 469 HOH HOH . F 3 HOH B 66 470 470 HOH HOH . F 3 HOH B 67 471 471 HOH HOH . F 3 HOH B 68 472 472 HOH HOH . F 3 HOH B 69 473 473 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.613 _atom_site.Cartn_y 26.007 _atom_site.Cartn_z 62.894 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #