data_3HHB # _model_server_result.job_id 3XxJAic3aGLGs8dOtFpwfA _model_server_result.datetime_utc '2024-11-21 14:59:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hhb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":147}' # _entry.id 3HHB # _exptl.entry_id 3HHB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.34 _cell.angle_gamma 90 _cell.entry_id 3HHB _cell.length_a 63.15 _cell.length_b 83.59 _cell.length_c 53.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HHB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc2 B NE2 HIS 92 B HIS 92 1_555 G FE HEM . B HEM 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 C NE2 HIS 87 C HIS 87 1_555 H FE HEM . C HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 D NE2 HIS 92 D HIS 92 1_555 J FE HEM . D HEM 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 321 n n P O2 PO4 sing 322 n n P O3 PO4 sing 323 n n P O4 PO4 sing 324 n n # _atom_sites.entry_id 3HHB _atom_sites.fract_transf_matrix[1][1] 0.015835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002604 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 142 1 HEM HEM . F 4 PO4 B 1 147 1 PO4 PO4 . G 3 HEM B 1 148 1 HEM HEM . H 3 HEM C 1 142 1 HEM HEM . I 4 PO4 D 1 147 1 PO4 PO4 . J 3 HEM D 1 148 1 HEM HEM . K 5 HOH A 1 143 3 HOH HOH . K 5 HOH A 2 144 5 HOH HOH . K 5 HOH A 3 145 7 HOH HOH . K 5 HOH A 4 146 8 HOH HOH . K 5 HOH A 5 147 9 HOH HOH . K 5 HOH A 6 148 10 HOH HOH . K 5 HOH A 7 149 11 HOH HOH . K 5 HOH A 8 150 12 HOH HOH . K 5 HOH A 9 151 13 HOH HOH . K 5 HOH A 10 152 14 HOH HOH . K 5 HOH A 11 153 15 HOH HOH . K 5 HOH A 12 154 16 HOH HOH . K 5 HOH A 13 155 18 HOH HOH . K 5 HOH A 14 156 19 HOH HOH . K 5 HOH A 15 157 20 HOH HOH . K 5 HOH A 16 158 23 HOH HOH . K 5 HOH A 17 159 24 HOH HOH . K 5 HOH A 18 160 28 HOH HOH . K 5 HOH A 19 161 30 HOH HOH . K 5 HOH A 20 162 35 HOH HOH . K 5 HOH A 21 163 36 HOH HOH . K 5 HOH A 22 164 37 HOH HOH . K 5 HOH A 23 165 38 HOH HOH . K 5 HOH A 24 166 39 HOH HOH . K 5 HOH A 25 167 40 HOH HOH . K 5 HOH A 26 168 41 HOH HOH . K 5 HOH A 27 169 42 HOH HOH . K 5 HOH A 28 170 43 HOH HOH . K 5 HOH A 29 171 44 HOH HOH . K 5 HOH A 30 172 46 HOH HOH . L 5 HOH B 1 149 2 HOH HOH . L 5 HOH B 2 150 4 HOH HOH . L 5 HOH B 3 151 17 HOH HOH . L 5 HOH B 4 152 21 HOH HOH . L 5 HOH B 5 153 22 HOH HOH . L 5 HOH B 6 154 25 HOH HOH . L 5 HOH B 7 155 26 HOH HOH . L 5 HOH B 8 156 27 HOH HOH . L 5 HOH B 9 157 29 HOH HOH . L 5 HOH B 10 158 31 HOH HOH . L 5 HOH B 11 159 32 HOH HOH . L 5 HOH B 12 160 33 HOH HOH . L 5 HOH B 13 161 34 HOH HOH . L 5 HOH B 14 162 45 HOH HOH . L 5 HOH B 15 163 47 HOH HOH . L 5 HOH B 16 164 48 HOH HOH . L 5 HOH B 17 165 49 HOH HOH . L 5 HOH B 18 166 50 HOH HOH . L 5 HOH B 19 167 51 HOH HOH . L 5 HOH B 20 168 52 HOH HOH . L 5 HOH B 21 169 53 HOH HOH . L 5 HOH B 22 170 54 HOH HOH . L 5 HOH B 23 171 55 HOH HOH . M 5 HOH C 1 143 6 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol P _atom_site.label_atom_id P _atom_site.label_comp_id PO4 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 12.936 _atom_site.Cartn_y -8.904 _atom_site.Cartn_z 44.782 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id P _atom_site.auth_comp_id PO4 _atom_site.auth_seq_id 147 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #