data_3HK1 # _model_server_result.job_id EQH6MpQx9WjAs3Ypm5HeIQ _model_server_result.datetime_utc '2025-07-03 12:12:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hk1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":132}' # _entry.id 3HK1 # _exptl.entry_id 3HK1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{[2-(methoxycarbonyl)-5-(2-thienyl)-3-thienyl]amino}-4-oxo-2-butenoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HK1 _cell.length_a 77.017 _cell.length_b 94.113 _cell.length_c 49.662 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HK1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H11 N O5 S2' _chem_comp.formula_weight 337.371 _chem_comp.id B64 _chem_comp.mon_nstd_flag . _chem_comp.name '4-{[2-(methoxycarbonyl)-5-(2-thienyl)-3-thienyl]amino}-4-oxo-2-butenoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "(2Z)-4-{[5-(methoxycarbonyl)-2,2'-bithiophen-4-yl]amino}-4-oxobut-2-enoic acid" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 B64 sing 70 n n C1 O1 B64 sing 71 n n C2 H2 B64 sing 72 n n C3 C2 B64 doub 73 z n C3 H3 B64 sing 74 n n O1 HO1 B64 sing 75 n n O2 C1 B64 doub 76 n n O7 CS1 B64 doub 77 n n N8 CS1 B64 sing 78 n n N8 HN8 B64 sing 79 n n C9 N8 B64 sing 80 n n C10 C9 B64 doub 81 n y C10 C14 B64 sing 82 n n S11 C10 B64 sing 83 n y S11 C12 B64 sing 84 n y C12 C13 B64 doub 85 n y C13 C9 B64 sing 86 n y C13 H13 B64 sing 87 n n C14 O17 B64 doub 88 n n O15 C14 B64 sing 89 n n O15 C16 B64 sing 90 n n C16 H16 B64 sing 91 n n C16 H16A B64 sing 92 n n C16 H16B B64 sing 93 n n C18 C12 B64 sing 94 n y C18 C19 B64 doub 95 n y C19 H19 B64 sing 96 n n C20 C19 B64 sing 97 n y C20 H20 B64 sing 98 n n C21 C20 B64 doub 99 n y C21 S22 B64 sing 100 n y C21 H21 B64 sing 101 n n S22 C18 B64 sing 102 n y CS1 C3 B64 sing 103 n n # _atom_sites.entry_id 3HK1 _atom_sites.fract_transf_matrix[1][1] 0.012984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010626 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B64 A 1 132 1 B64 B64 . C 3 HOH A 1 133 133 HOH HOH . C 3 HOH A 2 134 134 HOH HOH . C 3 HOH A 3 135 135 HOH HOH . C 3 HOH A 4 136 136 HOH HOH . C 3 HOH A 5 137 137 HOH HOH . C 3 HOH A 6 138 138 HOH HOH . C 3 HOH A 7 139 139 HOH HOH . C 3 HOH A 8 140 140 HOH HOH . C 3 HOH A 9 141 141 HOH HOH . C 3 HOH A 10 142 142 HOH HOH . C 3 HOH A 11 143 143 HOH HOH . C 3 HOH A 12 144 144 HOH HOH . C 3 HOH A 13 145 145 HOH HOH . C 3 HOH A 14 146 146 HOH HOH . C 3 HOH A 15 147 147 HOH HOH . C 3 HOH A 16 148 148 HOH HOH . C 3 HOH A 17 149 149 HOH HOH . C 3 HOH A 18 150 150 HOH HOH . C 3 HOH A 19 151 151 HOH HOH . C 3 HOH A 20 152 152 HOH HOH . C 3 HOH A 21 153 153 HOH HOH . C 3 HOH A 22 154 154 HOH HOH . C 3 HOH A 23 155 155 HOH HOH . C 3 HOH A 24 156 156 HOH HOH . C 3 HOH A 25 157 157 HOH HOH . C 3 HOH A 26 158 158 HOH HOH . C 3 HOH A 27 159 159 HOH HOH . C 3 HOH A 28 160 160 HOH HOH . C 3 HOH A 29 161 161 HOH HOH . C 3 HOH A 30 162 162 HOH HOH . C 3 HOH A 31 163 163 HOH HOH . C 3 HOH A 32 164 164 HOH HOH . C 3 HOH A 33 165 165 HOH HOH . C 3 HOH A 34 166 166 HOH HOH . C 3 HOH A 35 167 167 HOH HOH . C 3 HOH A 36 168 168 HOH HOH . C 3 HOH A 37 169 169 HOH HOH . C 3 HOH A 38 170 170 HOH HOH . C 3 HOH A 39 171 171 HOH HOH . C 3 HOH A 40 172 172 HOH HOH . C 3 HOH A 41 173 173 HOH HOH . C 3 HOH A 42 174 174 HOH HOH . C 3 HOH A 43 175 175 HOH HOH . C 3 HOH A 44 176 176 HOH HOH . C 3 HOH A 45 177 177 HOH HOH . C 3 HOH A 46 178 178 HOH HOH . C 3 HOH A 47 179 179 HOH HOH . C 3 HOH A 48 180 180 HOH HOH . C 3 HOH A 49 181 181 HOH HOH . C 3 HOH A 50 182 182 HOH HOH . C 3 HOH A 51 183 183 HOH HOH . C 3 HOH A 52 184 184 HOH HOH . C 3 HOH A 53 185 185 HOH HOH . C 3 HOH A 54 186 186 HOH HOH . C 3 HOH A 55 187 187 HOH HOH . C 3 HOH A 56 188 188 HOH HOH . C 3 HOH A 57 189 189 HOH HOH . C 3 HOH A 58 190 190 HOH HOH . C 3 HOH A 59 191 191 HOH HOH . C 3 HOH A 60 192 192 HOH HOH . C 3 HOH A 61 193 193 HOH HOH . C 3 HOH A 62 194 194 HOH HOH . C 3 HOH A 63 195 195 HOH HOH . C 3 HOH A 64 196 196 HOH HOH . C 3 HOH A 65 197 197 HOH HOH . C 3 HOH A 66 198 198 HOH HOH . C 3 HOH A 67 199 199 HOH HOH . C 3 HOH A 68 200 200 HOH HOH . C 3 HOH A 69 201 201 HOH HOH . C 3 HOH A 70 202 202 HOH HOH . C 3 HOH A 71 203 203 HOH HOH . C 3 HOH A 72 204 204 HOH HOH . C 3 HOH A 73 205 205 HOH HOH . C 3 HOH A 74 206 206 HOH HOH . C 3 HOH A 75 207 207 HOH HOH . C 3 HOH A 76 208 208 HOH HOH . C 3 HOH A 77 209 209 HOH HOH . C 3 HOH A 78 210 210 HOH HOH . C 3 HOH A 79 211 211 HOH HOH . C 3 HOH A 80 212 212 HOH HOH . C 3 HOH A 81 213 213 HOH HOH . C 3 HOH A 82 214 214 HOH HOH . C 3 HOH A 83 215 215 HOH HOH . C 3 HOH A 84 216 216 HOH HOH . C 3 HOH A 85 217 217 HOH HOH . C 3 HOH A 86 218 218 HOH HOH . C 3 HOH A 87 219 219 HOH HOH . C 3 HOH A 88 220 220 HOH HOH . C 3 HOH A 89 221 221 HOH HOH . C 3 HOH A 90 222 222 HOH HOH . C 3 HOH A 91 223 223 HOH HOH . C 3 HOH A 92 224 224 HOH HOH . C 3 HOH A 93 225 225 HOH HOH . C 3 HOH A 94 226 1 HOH HOH . C 3 HOH A 95 227 2 HOH HOH . C 3 HOH A 96 228 3 HOH HOH . C 3 HOH A 97 229 4 HOH HOH . C 3 HOH A 98 230 5 HOH HOH . C 3 HOH A 99 231 6 HOH HOH . C 3 HOH A 100 232 7 HOH HOH . C 3 HOH A 101 233 8 HOH HOH . C 3 HOH A 102 234 9 HOH HOH . C 3 HOH A 103 235 10 HOH HOH . C 3 HOH A 104 236 11 HOH HOH . C 3 HOH A 105 237 12 HOH HOH . C 3 HOH A 106 238 13 HOH HOH . C 3 HOH A 107 239 14 HOH HOH . C 3 HOH A 108 240 15 HOH HOH . C 3 HOH A 109 241 16 HOH HOH . C 3 HOH A 110 242 17 HOH HOH . C 3 HOH A 111 243 18 HOH HOH . C 3 HOH A 112 244 19 HOH HOH . C 3 HOH A 113 245 20 HOH HOH . C 3 HOH A 114 246 21 HOH HOH . C 3 HOH A 115 247 22 HOH HOH . C 3 HOH A 116 248 23 HOH HOH . C 3 HOH A 117 249 24 HOH HOH . C 3 HOH A 118 250 25 HOH HOH . C 3 HOH A 119 251 26 HOH HOH . C 3 HOH A 120 252 27 HOH HOH . C 3 HOH A 121 253 28 HOH HOH . C 3 HOH A 122 254 29 HOH HOH . C 3 HOH A 123 255 30 HOH HOH . C 3 HOH A 124 256 31 HOH HOH . C 3 HOH A 125 257 32 HOH HOH . C 3 HOH A 126 258 33 HOH HOH . C 3 HOH A 127 259 34 HOH HOH . C 3 HOH A 128 260 35 HOH HOH . C 3 HOH A 129 261 36 HOH HOH . C 3 HOH A 130 262 37 HOH HOH . C 3 HOH A 131 263 38 HOH HOH . C 3 HOH A 132 264 39 HOH HOH . C 3 HOH A 133 265 40 HOH HOH . C 3 HOH A 134 266 41 HOH HOH . C 3 HOH A 135 267 42 HOH HOH . C 3 HOH A 136 268 43 HOH HOH . C 3 HOH A 137 269 44 HOH HOH . C 3 HOH A 138 270 45 HOH HOH . C 3 HOH A 139 271 46 HOH HOH . C 3 HOH A 140 272 47 HOH HOH . C 3 HOH A 141 273 48 HOH HOH . C 3 HOH A 142 274 49 HOH HOH . C 3 HOH A 143 275 50 HOH HOH . C 3 HOH A 144 276 51 HOH HOH . C 3 HOH A 145 277 52 HOH HOH . C 3 HOH A 146 278 53 HOH HOH . C 3 HOH A 147 279 54 HOH HOH . C 3 HOH A 148 280 55 HOH HOH . C 3 HOH A 149 281 56 HOH HOH . C 3 HOH A 150 282 57 HOH HOH . C 3 HOH A 151 283 58 HOH HOH . C 3 HOH A 152 284 59 HOH HOH . C 3 HOH A 153 285 60 HOH HOH . C 3 HOH A 154 286 61 HOH HOH . C 3 HOH A 155 287 62 HOH HOH . C 3 HOH A 156 288 63 HOH HOH . C 3 HOH A 157 289 64 HOH HOH . C 3 HOH A 158 290 65 HOH HOH . C 3 HOH A 159 291 66 HOH HOH . C 3 HOH A 160 292 67 HOH HOH . C 3 HOH A 161 293 68 HOH HOH . C 3 HOH A 162 294 69 HOH HOH . C 3 HOH A 163 295 70 HOH HOH . C 3 HOH A 164 296 71 HOH HOH . C 3 HOH A 165 297 72 HOH HOH . C 3 HOH A 166 298 73 HOH HOH . C 3 HOH A 167 299 74 HOH HOH . C 3 HOH A 168 300 75 HOH HOH . C 3 HOH A 169 301 76 HOH HOH . C 3 HOH A 170 302 77 HOH HOH . C 3 HOH A 171 303 78 HOH HOH . C 3 HOH A 172 304 79 HOH HOH . C 3 HOH A 173 305 80 HOH HOH . C 3 HOH A 174 306 81 HOH HOH . C 3 HOH A 175 307 82 HOH HOH . C 3 HOH A 176 308 83 HOH HOH . C 3 HOH A 177 309 84 HOH HOH . C 3 HOH A 178 310 85 HOH HOH . C 3 HOH A 179 311 86 HOH HOH . C 3 HOH A 180 312 87 HOH HOH . C 3 HOH A 181 313 88 HOH HOH . C 3 HOH A 182 314 89 HOH HOH . C 3 HOH A 183 315 90 HOH HOH . C 3 HOH A 184 316 91 HOH HOH . C 3 HOH A 185 317 92 HOH HOH . C 3 HOH A 186 318 93 HOH HOH . C 3 HOH A 187 319 94 HOH HOH . C 3 HOH A 188 320 95 HOH HOH . C 3 HOH A 189 321 96 HOH HOH . C 3 HOH A 190 322 97 HOH HOH . C 3 HOH A 191 323 98 HOH HOH . C 3 HOH A 192 324 99 HOH HOH . C 3 HOH A 193 325 100 HOH HOH . C 3 HOH A 194 326 101 HOH HOH . C 3 HOH A 195 327 102 HOH HOH . C 3 HOH A 196 328 103 HOH HOH . C 3 HOH A 197 329 104 HOH HOH . C 3 HOH A 198 330 105 HOH HOH . C 3 HOH A 199 331 106 HOH HOH . C 3 HOH A 200 332 107 HOH HOH . C 3 HOH A 201 333 108 HOH HOH . C 3 HOH A 202 334 109 HOH HOH . C 3 HOH A 203 335 110 HOH HOH . C 3 HOH A 204 336 111 HOH HOH . C 3 HOH A 205 337 112 HOH HOH . C 3 HOH A 206 338 113 HOH HOH . C 3 HOH A 207 339 114 HOH HOH . C 3 HOH A 208 340 115 HOH HOH . C 3 HOH A 209 341 116 HOH HOH . C 3 HOH A 210 342 117 HOH HOH . C 3 HOH A 211 343 118 HOH HOH . C 3 HOH A 212 344 119 HOH HOH . C 3 HOH A 213 345 120 HOH HOH . C 3 HOH A 214 346 121 HOH HOH . C 3 HOH A 215 347 122 HOH HOH . C 3 HOH A 216 348 123 HOH HOH . C 3 HOH A 217 349 124 HOH HOH . C 3 HOH A 218 350 125 HOH HOH . C 3 HOH A 219 351 126 HOH HOH . C 3 HOH A 220 352 127 HOH HOH . C 3 HOH A 221 353 128 HOH HOH . C 3 HOH A 222 354 129 HOH HOH . C 3 HOH A 223 355 130 HOH HOH . C 3 HOH A 224 356 131 HOH HOH . C 3 HOH A 225 357 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B64 . . . B 2 10.287 19.468 -2.76 1 20.99 ? C1 B64 132 A 1 HETATM 2 C C2 B64 . . . B 2 11.538 18.623 -2.728 1 20.41 ? C2 B64 132 A 1 HETATM 3 C C3 B64 . . . B 2 11.965 18.115 -4.093 1 20.12 ? C3 B64 132 A 1 HETATM 4 O O1 B64 . . . B 2 10.395 20.569 -2.2 1 18.22 ? O1 B64 132 A 1 HETATM 5 O O2 B64 . . . B 2 9.225 19.074 -3.322 1 20.71 ? O2 B64 132 A 1 HETATM 6 O O7 B64 . . . B 2 11.312 20.201 -5.34 1 17.69 ? O7 B64 132 A 1 HETATM 7 N N8 B64 . . . B 2 12.807 18.719 -6.289 1 16.57 ? N8 B64 132 A 1 HETATM 8 C C9 B64 . . . B 2 12.956 19.352 -7.487 1 14.67 ? C9 B64 132 A 1 HETATM 9 C C10 B64 . . . B 2 13.935 18.742 -8.387 1 14.88 ? C10 B64 132 A 1 HETATM 10 S S11 B64 . . . B 2 13.961 19.659 -9.882 1 14.7 ? S11 B64 132 A 1 HETATM 11 C C12 B64 . . . B 2 12.622 20.675 -9.311 1 14.18 ? C12 B64 132 A 1 HETATM 12 C C13 B64 . . . B 2 12.185 20.413 -8.003 1 13.92 ? C13 B64 132 A 1 HETATM 13 C C14 B64 . . . B 2 14.862 17.637 -8.127 1 15.17 ? C14 B64 132 A 1 HETATM 14 O O15 B64 . . . B 2 15.754 17.244 -9.179 1 15.13 ? O15 B64 132 A 1 HETATM 15 C C16 B64 . . . B 2 16.657 16.179 -8.882 1 14.92 ? C16 B64 132 A 1 HETATM 16 O O17 B64 . . . B 2 14.924 17.103 -7.02 1 14.91 ? O17 B64 132 A 1 HETATM 17 C C18 B64 . . . B 2 12.109 21.739 -10.214 1 15.66 ? C18 B64 132 A 1 HETATM 18 C C19 B64 . . . B 2 11.158 22.711 -9.901 1 14.63 ? C19 B64 132 A 1 HETATM 19 C C20 B64 . . . B 2 10.947 23.553 -11.024 1 16.35 ? C20 B64 132 A 1 HETATM 20 C C21 B64 . . . B 2 11.701 23.296 -12.191 1 15.71 ? C21 B64 132 A 1 HETATM 21 S S22 B64 . . . B 2 12.666 21.829 -11.887 1 18.12 ? S22 B64 132 A 1 HETATM 22 C CS1 B64 . . . B 2 12.034 19.187 -5.251 1 17.78 ? CS1 B64 132 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 392 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #