data_3HKK # _model_server_result.job_id y5rAtjIFWTLuUf5tskMhiA _model_server_result.datetime_utc '2024-11-16 20:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hkk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":203}' # _entry.id 3HKK # _exptl.entry_id 3HKK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.322 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTATHIONE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HKK _cell.length_a 170.718 _cell.length_b 170.718 _cell.length_c 170.718 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 18_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 85.359 85.359 3 'crystal symmetry operation' 48_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 85.359 85.359 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O9 S' _chem_comp.formula_weight 355.322 _chem_comp.id GTS _chem_comp.mon_nstd_flag . _chem_comp.name 'GLUTATHIONE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GTS sing 129 n n N1 HN11 GTS sing 130 n n N1 HN12 GTS sing 131 n n CA1 C1 GTS sing 132 n n CA1 CB1 GTS sing 133 n n CA1 HA1 GTS sing 134 n n C1 O11 GTS doub 135 n n C1 O12 GTS sing 136 n n O12 HO2 GTS sing 137 n n CB1 CG1 GTS sing 138 n n CB1 HB11 GTS sing 139 n n CB1 HB12 GTS sing 140 n n CG1 CD1 GTS sing 141 n n CG1 HG11 GTS sing 142 n n CG1 HG12 GTS sing 143 n n CD1 OE1 GTS doub 144 n n CD1 N2 GTS sing 145 n n N2 CA2 GTS sing 146 n n N2 HN2 GTS sing 147 n n CA2 C2 GTS sing 148 n n CA2 CB2 GTS sing 149 n n CA2 HA2 GTS sing 150 n n C2 O2 GTS doub 151 n n C2 N3 GTS sing 152 n n CB2 SG2 GTS sing 153 n n CB2 HB21 GTS sing 154 n n CB2 HB22 GTS sing 155 n n SG2 O1S GTS doub 156 n n SG2 O2S GTS doub 157 n n SG2 O3S GTS sing 158 n n O3S HOS3 GTS sing 159 n n N3 CA3 GTS sing 160 n n N3 HN3 GTS sing 161 n n CA3 C3 GTS sing 162 n n CA3 HA31 GTS sing 163 n n CA3 HA32 GTS sing 164 n n C3 O31 GTS sing 165 n n C3 O32 GTS doub 166 n n O31 HO3 GTS sing 167 n n # _atom_sites.entry_id 3HKK _atom_sites.fract_transf_matrix[1][1] 0.005858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PAM A 1 1151 1151 PAM PAM . C 3 PLM A 1 1152 1152 PLM PLM . D 3 PLM A 1 1153 1153 PLM PLM . E 3 PLM A 1 1154 1154 PLM PLM . F 3 PLM A 1 1156 1156 PLM PLM . G 3 PLM A 1 1157 1157 PLM PLM . H 4 GTS A 1 203 203 GTS GTS . I 3 PLM A 1 151 1151 PLM PLM . J 5 HOH A 1 2011 2011 HOH HOH . J 5 HOH A 2 2014 2014 HOH HOH . J 5 HOH A 3 2015 2015 HOH HOH . J 5 HOH A 4 2018 2018 HOH HOH . J 5 HOH A 5 2022 2022 HOH HOH . J 5 HOH A 6 2023 2023 HOH HOH . J 5 HOH A 7 2025 2025 HOH HOH . J 5 HOH A 8 2026 2026 HOH HOH . J 5 HOH A 9 2027 2027 HOH HOH . J 5 HOH A 10 2028 2028 HOH HOH . J 5 HOH A 11 2029 2029 HOH HOH . J 5 HOH A 12 2030 2030 HOH HOH . J 5 HOH A 13 2031 2031 HOH HOH . J 5 HOH A 14 2032 2032 HOH HOH . J 5 HOH A 15 2034 2034 HOH HOH . J 5 HOH A 16 2035 2035 HOH HOH . J 5 HOH A 17 2037 2037 HOH HOH . J 5 HOH A 18 2038 2038 HOH HOH . J 5 HOH A 19 2039 2039 HOH HOH . J 5 HOH A 20 2040 2040 HOH HOH . J 5 HOH A 21 2041 2041 HOH HOH . J 5 HOH A 22 2042 2042 HOH HOH . J 5 HOH A 23 2043 2043 HOH HOH . J 5 HOH A 24 2044 2044 HOH HOH . J 5 HOH A 25 2046 2046 HOH HOH . J 5 HOH A 26 2047 2047 HOH HOH . J 5 HOH A 27 2051 2051 HOH HOH . J 5 HOH A 28 2053 2053 HOH HOH . J 5 HOH A 29 2054 2054 HOH HOH . J 5 HOH A 30 2055 2055 HOH HOH . J 5 HOH A 31 2056 2056 HOH HOH . J 5 HOH A 32 2057 2057 HOH HOH . J 5 HOH A 33 2062 2062 HOH HOH . J 5 HOH A 34 2063 2063 HOH HOH . J 5 HOH A 35 2065 2065 HOH HOH . J 5 HOH A 36 2066 2066 HOH HOH . J 5 HOH A 37 2067 2067 HOH HOH . J 5 HOH A 38 2068 2068 HOH HOH . J 5 HOH A 39 2069 2069 HOH HOH . J 5 HOH A 40 2070 2070 HOH HOH . J 5 HOH A 41 2072 2072 HOH HOH . J 5 HOH A 42 2073 2073 HOH HOH . J 5 HOH A 43 2074 2074 HOH HOH . J 5 HOH A 44 2075 2075 HOH HOH . J 5 HOH A 45 2076 2076 HOH HOH . J 5 HOH A 46 2079 2079 HOH HOH . J 5 HOH A 47 2080 2080 HOH HOH . J 5 HOH A 48 2082 2082 HOH HOH . J 5 HOH A 49 2083 2083 HOH HOH . J 5 HOH A 50 2084 2084 HOH HOH . J 5 HOH A 51 2085 2085 HOH HOH . J 5 HOH A 52 2087 2087 HOH HOH . J 5 HOH A 53 2090 2090 HOH HOH . J 5 HOH A 54 2091 2091 HOH HOH . J 5 HOH A 55 2092 2092 HOH HOH . J 5 HOH A 56 2093 2093 HOH HOH . J 5 HOH A 57 2097 2097 HOH HOH . J 5 HOH A 58 2098 2098 HOH HOH . J 5 HOH A 59 2102 2102 HOH HOH . J 5 HOH A 60 2104 2104 HOH HOH . J 5 HOH A 61 2105 2105 HOH HOH . J 5 HOH A 62 2109 2109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTS . . . H 4 7.506 67.179 15.47 1 41.08 ? N1 GTS 203 A 1 HETATM 2 C CA1 GTS . . . H 4 6.561 66.108 15.169 1 42.37 ? CA1 GTS 203 A 1 HETATM 3 C C1 GTS . . . H 4 5.455 66.63 14.22 1 42.68 ? C1 GTS 203 A 1 HETATM 4 O O11 GTS . . . H 4 5.434 67.853 13.86 1 41.6 ? O11 GTS 203 A 1 HETATM 5 O O12 GTS . . . H 4 4.603 65.813 13.771 1 41.15 ? O12 GTS 203 A 1 HETATM 6 C CB1 GTS . . . H 4 6.15 65.481 16.526 1 40.64 ? CB1 GTS 203 A 1 HETATM 7 C CG1 GTS . . . H 4 5.088 64.375 16.534 1 40.53 ? CG1 GTS 203 A 1 HETATM 8 C CD1 GTS . . . H 4 5.358 63.292 15.52 1 41.89 ? CD1 GTS 203 A 1 HETATM 9 O OE1 GTS . . . H 4 6.432 62.695 15.549 1 42.68 ? OE1 GTS 203 A 1 HETATM 10 N N2 GTS . . . H 4 4.376 63.065 14.632 1 41.98 ? N2 GTS 203 A 1 HETATM 11 C CA2 GTS . . . H 4 4.376 62.007 13.617 1 42.4 ? CA2 GTS 203 A 1 HETATM 12 C C2 GTS . . . H 4 4.873 62.444 12.257 1 43.53 ? C2 GTS 203 A 1 HETATM 13 O O2 GTS . . . H 4 5.26 61.621 11.414 1 43.83 ? O2 GTS 203 A 1 HETATM 14 C CB2 GTS . . . H 4 2.995 61.344 13.513 1 42.14 ? CB2 GTS 203 A 1 HETATM 15 S SG2 GTS . . . H 4 1.686 62.294 13.035 1 41.52 ? SG2 GTS 203 A 1 HETATM 16 O O1S GTS . . . H 4 1.368 63.417 13.951 1 40.9 ? O1S GTS 203 A 1 HETATM 17 O O2S GTS . . . H 4 1.939 62.863 11.685 1 42.72 ? O2S GTS 203 A 1 HETATM 18 O O3S GTS . . . H 4 0.536 61.376 13.026 1 42.36 ? O3S GTS 203 A 1 HETATM 19 N N3 GTS . . . H 4 4.876 63.76 12.058 1 43.56 ? N3 GTS 203 A 1 HETATM 20 C CA3 GTS . . . H 4 5.168 64.331 10.764 1 46.69 ? CA3 GTS 203 A 1 HETATM 21 C C3 GTS . . . H 4 6.385 65.236 10.733 1 48.46 ? C3 GTS 203 A 1 HETATM 22 O O31 GTS . . . H 4 7.12 65.338 11.75 1 48.14 ? O31 GTS 203 A 1 HETATM 23 O O32 GTS . . . H 4 6.603 65.858 9.658 1 49.83 ? O32 GTS 203 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #