data_3HKN # _model_server_result.job_id 39KUICdv91xziI0h6a8btg _model_server_result.datetime_utc '2024-11-27 03:36:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hkn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":261}' # _entry.id 3HKN # _exptl.entry_id 3HKN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.5 _cell.angle_gamma 90 _cell.entry_id 3HKN _cell.length_a 42.4 _cell.length_b 41.7 _cell.length_c 72.5 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 Z3L _pdbx_entity_branch_link.comp_id_2 Z3K _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 H4O _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B Z3K 1 B 1 Z3K C 300 MFS 2 n B Z3L 2 B 2 Z3L C 300 MFS # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 Z3K . B Z3K 1 1_555 B C1 Z3L . B Z3L 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 sing metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 C ZN ZN . A ZN 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 C ZN ZN . A ZN 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 C ZN ZN . A ZN 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 C ZN ZN . A ZN 261 1_555 B N3S Z3K . B Z3K 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HKN _atom_sites.fract_transf_matrix[1][1] 0.023585 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006099 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 261 261 ZN ZN . D 4 GOL A 1 301 301 GOL GOL . E 4 GOL A 1 302 302 GOL GOL . F 5 HOH A 1 262 1 HOH TIP . F 5 HOH A 2 263 2 HOH TIP . F 5 HOH A 3 264 4 HOH TIP . F 5 HOH A 4 265 5 HOH TIP . F 5 HOH A 5 266 6 HOH TIP . F 5 HOH A 6 267 7 HOH TIP . F 5 HOH A 7 268 8 HOH TIP . F 5 HOH A 8 269 9 HOH TIP . F 5 HOH A 9 270 10 HOH TIP . F 5 HOH A 10 271 11 HOH TIP . F 5 HOH A 11 272 12 HOH TIP . F 5 HOH A 12 273 13 HOH TIP . F 5 HOH A 13 274 14 HOH TIP . F 5 HOH A 14 275 15 HOH TIP . F 5 HOH A 15 276 16 HOH TIP . F 5 HOH A 16 277 17 HOH TIP . F 5 HOH A 17 278 18 HOH TIP . F 5 HOH A 18 279 19 HOH TIP . F 5 HOH A 19 280 20 HOH TIP . F 5 HOH A 20 281 21 HOH TIP . F 5 HOH A 21 282 22 HOH TIP . F 5 HOH A 22 283 23 HOH TIP . F 5 HOH A 23 284 24 HOH TIP . F 5 HOH A 24 285 25 HOH TIP . F 5 HOH A 25 286 26 HOH TIP . F 5 HOH A 26 287 27 HOH TIP . F 5 HOH A 27 288 28 HOH TIP . F 5 HOH A 28 289 29 HOH TIP . F 5 HOH A 29 290 30 HOH TIP . F 5 HOH A 30 291 31 HOH TIP . F 5 HOH A 31 292 32 HOH TIP . F 5 HOH A 32 293 33 HOH TIP . F 5 HOH A 33 294 34 HOH TIP . F 5 HOH A 34 295 35 HOH TIP . F 5 HOH A 35 296 36 HOH TIP . F 5 HOH A 36 297 37 HOH TIP . F 5 HOH A 37 298 38 HOH TIP . F 5 HOH A 38 299 39 HOH TIP . F 5 HOH A 39 303 40 HOH TIP . F 5 HOH A 40 304 41 HOH TIP . F 5 HOH A 41 305 42 HOH TIP . F 5 HOH A 42 306 43 HOH TIP . F 5 HOH A 43 307 44 HOH TIP . F 5 HOH A 44 308 45 HOH TIP . F 5 HOH A 45 309 46 HOH TIP . F 5 HOH A 46 310 47 HOH TIP . F 5 HOH A 47 311 48 HOH TIP . F 5 HOH A 48 312 49 HOH TIP . F 5 HOH A 49 313 50 HOH TIP . F 5 HOH A 50 314 51 HOH TIP . F 5 HOH A 51 315 52 HOH TIP . F 5 HOH A 52 316 53 HOH TIP . F 5 HOH A 53 317 54 HOH TIP . F 5 HOH A 54 318 55 HOH TIP . F 5 HOH A 55 319 56 HOH TIP . F 5 HOH A 56 320 57 HOH TIP . F 5 HOH A 57 321 58 HOH TIP . F 5 HOH A 58 322 59 HOH TIP . F 5 HOH A 59 323 60 HOH TIP . F 5 HOH A 60 324 61 HOH TIP . F 5 HOH A 61 325 62 HOH TIP . F 5 HOH A 62 326 63 HOH TIP . F 5 HOH A 63 327 64 HOH TIP . F 5 HOH A 64 328 65 HOH TIP . F 5 HOH A 65 329 66 HOH TIP . F 5 HOH A 66 330 67 HOH TIP . F 5 HOH A 67 331 68 HOH TIP . F 5 HOH A 68 332 69 HOH TIP . F 5 HOH A 69 333 70 HOH TIP . F 5 HOH A 70 334 71 HOH TIP . F 5 HOH A 71 335 72 HOH TIP . F 5 HOH A 72 336 73 HOH TIP . F 5 HOH A 73 337 74 HOH TIP . F 5 HOH A 74 338 75 HOH TIP . F 5 HOH A 75 339 76 HOH TIP . F 5 HOH A 76 340 77 HOH TIP . F 5 HOH A 77 341 78 HOH TIP . F 5 HOH A 78 342 79 HOH TIP . F 5 HOH A 79 343 80 HOH TIP . F 5 HOH A 80 344 81 HOH TIP . F 5 HOH A 81 345 82 HOH TIP . F 5 HOH A 82 346 83 HOH TIP . F 5 HOH A 83 347 84 HOH TIP . F 5 HOH A 84 348 85 HOH TIP . F 5 HOH A 85 349 86 HOH TIP . F 5 HOH A 86 350 87 HOH TIP . F 5 HOH A 87 351 88 HOH TIP . F 5 HOH A 88 352 89 HOH TIP . F 5 HOH A 89 353 90 HOH TIP . F 5 HOH A 90 354 91 HOH TIP . F 5 HOH A 91 355 92 HOH TIP . F 5 HOH A 92 356 93 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.555 _atom_site.Cartn_y 0.194 _atom_site.Cartn_z 15.432 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.27 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 261 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #