data_3HKO # _model_server_result.job_id Kpeu9mDJm0dBbRt6AjkpSw _model_server_result.datetime_utc '2024-11-04 22:55:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":330}' # _entry.id 3HKO # _exptl.entry_id 3HKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HKO _cell.length_a 54.48 _cell.length_b 63.045 _cell.length_c 84.041 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 111 A HIS 93 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc2 A SG CYS 140 A CYS 122 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc3 A SG CYS 142 A CYS 124 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc4 A SG CYS 145 A CYS 127 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc5 A OD2 ASP 213 A ASP 195 1_555 E MG MG . A MG 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc6 D O3G ANP . A ANP 329 1_555 E MG MG . A MG 330 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc7 D O1B ANP . A ANP 329 1_555 E MG MG . A MG 330 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.91 ? metalc ? metalc8 D O2B ANP . A ANP 329 1_555 E MG MG . A MG 330 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc9 D O1A ANP . A ANP 329 1_555 E MG MG . A MG 330 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.884 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HKO _atom_sites.fract_transf_matrix[1][1] 0.018355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015862 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011899 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 328 1 GOL GOL . C 3 ZN A 1 701 701 ZN ZN . D 4 ANP A 1 329 1 ANP ANP . E 5 MG A 1 330 1 MG MG . F 6 HOH A 1 331 1 HOH HOH . F 6 HOH A 2 332 2 HOH HOH . F 6 HOH A 3 333 3 HOH HOH . F 6 HOH A 4 334 4 HOH HOH . F 6 HOH A 5 335 5 HOH HOH . F 6 HOH A 6 336 6 HOH HOH . F 6 HOH A 7 337 7 HOH HOH . F 6 HOH A 8 338 8 HOH HOH . F 6 HOH A 9 339 9 HOH HOH . F 6 HOH A 10 340 10 HOH HOH . F 6 HOH A 11 341 11 HOH HOH . F 6 HOH A 12 342 12 HOH HOH . F 6 HOH A 13 343 13 HOH HOH . F 6 HOH A 14 344 14 HOH HOH . F 6 HOH A 15 345 15 HOH HOH . F 6 HOH A 16 346 16 HOH HOH . F 6 HOH A 17 347 17 HOH HOH . F 6 HOH A 18 348 18 HOH HOH . F 6 HOH A 19 349 19 HOH HOH . F 6 HOH A 20 350 20 HOH HOH . F 6 HOH A 21 351 21 HOH HOH . F 6 HOH A 22 352 22 HOH HOH . F 6 HOH A 23 353 23 HOH HOH . F 6 HOH A 24 354 24 HOH HOH . F 6 HOH A 25 355 25 HOH HOH . F 6 HOH A 26 356 26 HOH HOH . F 6 HOH A 27 357 27 HOH HOH . F 6 HOH A 28 358 28 HOH HOH . F 6 HOH A 29 359 29 HOH HOH . F 6 HOH A 30 360 30 HOH HOH . F 6 HOH A 31 361 31 HOH HOH . F 6 HOH A 32 362 32 HOH HOH . F 6 HOH A 33 363 33 HOH HOH . F 6 HOH A 34 364 34 HOH HOH . F 6 HOH A 35 365 35 HOH HOH . F 6 HOH A 36 366 36 HOH HOH . F 6 HOH A 37 367 37 HOH HOH . F 6 HOH A 38 368 38 HOH HOH . F 6 HOH A 39 369 39 HOH HOH . F 6 HOH A 40 370 40 HOH HOH . F 6 HOH A 41 371 41 HOH HOH . F 6 HOH A 42 372 42 HOH HOH . F 6 HOH A 43 373 43 HOH HOH . F 6 HOH A 44 374 44 HOH HOH . F 6 HOH A 45 375 45 HOH HOH . F 6 HOH A 46 376 47 HOH HOH . F 6 HOH A 47 377 48 HOH HOH . F 6 HOH A 48 378 49 HOH HOH . F 6 HOH A 49 379 50 HOH HOH . F 6 HOH A 50 380 52 HOH HOH . F 6 HOH A 51 381 53 HOH HOH . F 6 HOH A 52 382 54 HOH HOH . F 6 HOH A 53 383 55 HOH HOH . F 6 HOH A 54 384 56 HOH HOH . F 6 HOH A 55 385 57 HOH HOH . F 6 HOH A 56 386 58 HOH HOH . F 6 HOH A 57 387 59 HOH HOH . F 6 HOH A 58 388 60 HOH HOH . F 6 HOH A 59 389 61 HOH HOH . F 6 HOH A 60 390 62 HOH HOH . F 6 HOH A 61 391 63 HOH HOH . F 6 HOH A 62 392 64 HOH HOH . F 6 HOH A 63 393 66 HOH HOH . F 6 HOH A 64 394 67 HOH HOH . F 6 HOH A 65 395 68 HOH HOH . F 6 HOH A 66 396 69 HOH HOH . F 6 HOH A 67 397 70 HOH HOH . F 6 HOH A 68 398 71 HOH HOH . F 6 HOH A 69 399 72 HOH HOH . F 6 HOH A 70 400 73 HOH HOH . F 6 HOH A 71 401 74 HOH HOH . F 6 HOH A 72 402 76 HOH HOH . F 6 HOH A 73 403 77 HOH HOH . F 6 HOH A 74 404 78 HOH HOH . F 6 HOH A 75 405 80 HOH HOH . F 6 HOH A 76 406 81 HOH HOH . F 6 HOH A 77 407 82 HOH HOH . F 6 HOH A 78 408 83 HOH HOH . F 6 HOH A 79 409 84 HOH HOH . F 6 HOH A 80 410 85 HOH HOH . F 6 HOH A 81 411 86 HOH HOH . F 6 HOH A 82 412 87 HOH HOH . F 6 HOH A 83 413 88 HOH HOH . F 6 HOH A 84 414 89 HOH HOH . F 6 HOH A 85 415 90 HOH HOH . F 6 HOH A 86 416 91 HOH HOH . F 6 HOH A 87 417 93 HOH HOH . F 6 HOH A 88 418 94 HOH HOH . F 6 HOH A 89 419 96 HOH HOH . F 6 HOH A 90 420 97 HOH HOH . F 6 HOH A 91 421 98 HOH HOH . F 6 HOH A 92 422 99 HOH HOH . F 6 HOH A 93 423 100 HOH HOH . F 6 HOH A 94 424 102 HOH HOH . F 6 HOH A 95 425 103 HOH HOH . F 6 HOH A 96 426 104 HOH HOH . F 6 HOH A 97 427 105 HOH HOH . F 6 HOH A 98 428 106 HOH HOH . F 6 HOH A 99 429 107 HOH HOH . F 6 HOH A 100 430 108 HOH HOH . F 6 HOH A 101 431 109 HOH HOH . F 6 HOH A 102 432 110 HOH HOH . F 6 HOH A 103 433 111 HOH HOH . F 6 HOH A 104 434 112 HOH HOH . F 6 HOH A 105 435 113 HOH HOH . F 6 HOH A 106 436 114 HOH HOH . F 6 HOH A 107 437 115 HOH HOH . F 6 HOH A 108 438 116 HOH HOH . F 6 HOH A 109 439 117 HOH HOH . F 6 HOH A 110 440 118 HOH HOH . F 6 HOH A 111 441 119 HOH HOH . F 6 HOH A 112 442 120 HOH HOH . F 6 HOH A 113 443 121 HOH HOH . F 6 HOH A 114 444 122 HOH HOH . F 6 HOH A 115 445 123 HOH HOH . F 6 HOH A 116 446 125 HOH HOH . F 6 HOH A 117 447 126 HOH HOH . F 6 HOH A 118 448 129 HOH HOH . F 6 HOH A 119 449 130 HOH HOH . F 6 HOH A 120 450 131 HOH HOH . F 6 HOH A 121 451 132 HOH HOH . F 6 HOH A 122 452 133 HOH HOH . F 6 HOH A 123 453 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 9.555 _atom_site.Cartn_y -23.738 _atom_site.Cartn_z -23.906 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 330 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #