data_3HKP
#
_model_server_result.job_id            TZv31lDW88QoG0apT4fxoQ 
_model_server_result.datetime_utc      '2024-11-24 17:30:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hkp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":282}' 
#
_entry.id    3HKP 
#
_exptl.entry_id    3HKP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3,4-DIHYDROXYBENZOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.28 
_cell.angle_gamma         90 
_cell.entry_id            3HKP 
_cell.length_a            88.42 
_cell.length_b            37.39 
_cell.length_c            74.1 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HKP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -8.105602 0 73.655341 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 162 A TYR 162 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? 
metalc ? metalc2 A NE2 HIS 220 A HIS 220 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc3 A NE2 HIS 222 A HIS 222 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc4 B FE FE . A FE 281 1_555 C O3 DHB . A DHB 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc5 B FE FE . A FE 281 1_555 C O4 DHB . A DHB 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
#
_chem_comp.formula           'C7 H6 O4' 
_chem_comp.formula_weight    154.12 
_chem_comp.id                DHB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3,4-DIHYDROXYBENZOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DHB doub 219 n y 
C1 C6 DHB sing 220 n y 
C1 C DHB sing 221 n n 
C2 C3 DHB sing 222 n y 
C2 H2 DHB sing 223 n n 
C3 O3 DHB sing 224 n n 
C3 C4 DHB doub 225 n y 
O3 HO3 DHB sing 226 n n 
C4 O4 DHB sing 227 n n 
C4 C5 DHB sing 228 n y 
O4 HO4 DHB sing 229 n n 
C5 C6 DHB doub 230 n y 
C5 H5 DHB sing 231 n n 
C6 H6 DHB sing 232 n n 
C O1 DHB doub 233 n n 
C O2 DHB sing 234 n n 
O2 HO2 DHB sing 235 n n 
#
_atom_sites.entry_id                     3HKP 
_atom_sites.fract_transf_matrix[1][1]    0.01131 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001245 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026745 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013577 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 281 281 FE FE . 
C 3 DHB A 1 282 1 DHB DHB . 
D 4 6PL A 1 283 1 6PL 6PL . 
E 5 HOH A 1 284 1 HOH HOH . 
E 5 HOH A 2 285 2 HOH HOH . 
E 5 HOH A 3 286 3 HOH HOH . 
E 5 HOH A 4 287 4 HOH HOH . 
E 5 HOH A 5 288 5 HOH HOH . 
E 5 HOH A 6 289 6 HOH HOH . 
E 5 HOH A 7 290 7 HOH HOH . 
E 5 HOH A 8 291 8 HOH HOH . 
E 5 HOH A 9 292 9 HOH HOH . 
E 5 HOH A 10 293 11 HOH HOH . 
E 5 HOH A 11 294 12 HOH HOH . 
E 5 HOH A 12 295 13 HOH HOH . 
E 5 HOH A 13 296 14 HOH HOH . 
E 5 HOH A 14 297 15 HOH HOH . 
E 5 HOH A 15 298 16 HOH HOH . 
E 5 HOH A 16 299 17 HOH HOH . 
E 5 HOH A 17 300 18 HOH HOH . 
E 5 HOH A 18 301 19 HOH HOH . 
E 5 HOH A 19 302 20 HOH HOH . 
E 5 HOH A 20 303 21 HOH HOH . 
E 5 HOH A 21 304 22 HOH HOH . 
E 5 HOH A 22 305 23 HOH HOH . 
E 5 HOH A 23 306 24 HOH HOH . 
E 5 HOH A 24 307 25 HOH HOH . 
E 5 HOH A 25 308 26 HOH HOH . 
E 5 HOH A 26 309 27 HOH HOH . 
E 5 HOH A 27 310 28 HOH HOH . 
E 5 HOH A 28 311 29 HOH HOH . 
E 5 HOH A 29 312 30 HOH HOH . 
E 5 HOH A 30 313 31 HOH HOH . 
E 5 HOH A 31 314 32 HOH HOH . 
E 5 HOH A 32 315 33 HOH HOH . 
E 5 HOH A 33 316 34 HOH HOH . 
E 5 HOH A 34 317 35 HOH HOH . 
E 5 HOH A 35 318 36 HOH HOH . 
E 5 HOH A 36 319 38 HOH HOH . 
E 5 HOH A 37 320 39 HOH HOH . 
E 5 HOH A 38 321 40 HOH HOH . 
E 5 HOH A 39 322 41 HOH HOH . 
E 5 HOH A 40 323 42 HOH HOH . 
E 5 HOH A 41 324 43 HOH HOH . 
E 5 HOH A 42 325 44 HOH HOH . 
E 5 HOH A 43 326 45 HOH HOH . 
E 5 HOH A 44 327 46 HOH HOH . 
E 5 HOH A 45 328 47 HOH HOH . 
E 5 HOH A 46 329 48 HOH HOH . 
E 5 HOH A 47 330 49 HOH HOH . 
E 5 HOH A 48 331 50 HOH HOH . 
E 5 HOH A 49 332 51 HOH HOH . 
E 5 HOH A 50 333 52 HOH HOH . 
E 5 HOH A 51 334 53 HOH HOH . 
E 5 HOH A 52 335 54 HOH HOH . 
E 5 HOH A 53 336 55 HOH HOH . 
E 5 HOH A 54 337 56 HOH HOH . 
E 5 HOH A 55 338 57 HOH HOH . 
E 5 HOH A 56 339 58 HOH HOH . 
E 5 HOH A 57 340 59 HOH HOH . 
E 5 HOH A 58 341 60 HOH HOH . 
E 5 HOH A 59 342 61 HOH HOH . 
E 5 HOH A 60 343 62 HOH HOH . 
E 5 HOH A 61 344 63 HOH HOH . 
E 5 HOH A 62 345 64 HOH HOH . 
E 5 HOH A 63 346 65 HOH HOH . 
E 5 HOH A 64 347 66 HOH HOH . 
E 5 HOH A 65 348 67 HOH HOH . 
E 5 HOH A 66 349 68 HOH HOH . 
E 5 HOH A 67 350 69 HOH HOH . 
E 5 HOH A 68 351 70 HOH HOH . 
E 5 HOH A 69 352 71 HOH HOH . 
E 5 HOH A 70 353 72 HOH HOH . 
E 5 HOH A 71 354 73 HOH HOH . 
E 5 HOH A 72 355 75 HOH HOH . 
E 5 HOH A 73 356 76 HOH HOH . 
E 5 HOH A 74 357 77 HOH HOH . 
E 5 HOH A 75 358 78 HOH HOH . 
E 5 HOH A 76 359 79 HOH HOH . 
E 5 HOH A 77 360 80 HOH HOH . 
E 5 HOH A 78 361 81 HOH HOH . 
E 5 HOH A 79 362 82 HOH HOH . 
E 5 HOH A 80 363 83 HOH HOH . 
E 5 HOH A 81 364 84 HOH HOH . 
E 5 HOH A 82 365 85 HOH HOH . 
E 5 HOH A 83 366 86 HOH HOH . 
E 5 HOH A 84 367 87 HOH HOH . 
E 5 HOH A 85 368 88 HOH HOH . 
E 5 HOH A 86 369 90 HOH HOH . 
E 5 HOH A 87 370 91 HOH HOH . 
E 5 HOH A 88 371 92 HOH HOH . 
E 5 HOH A 89 372 93 HOH HOH . 
E 5 HOH A 90 373 94 HOH HOH . 
E 5 HOH A 91 374 95 HOH HOH . 
E 5 HOH A 92 375 96 HOH HOH . 
E 5 HOH A 93 376 97 HOH HOH . 
E 5 HOH A 94 377 98 HOH HOH . 
E 5 HOH A 95 378 99 HOH HOH . 
E 5 HOH A 96 379 100 HOH HOH . 
E 5 HOH A 97 380 101 HOH HOH . 
E 5 HOH A 98 381 102 HOH HOH . 
E 5 HOH A 99 382 103 HOH HOH . 
E 5 HOH A 100 383 104 HOH HOH . 
E 5 HOH A 101 384 105 HOH HOH . 
E 5 HOH A 102 385 106 HOH HOH . 
E 5 HOH A 103 386 107 HOH HOH . 
E 5 HOH A 104 387 108 HOH HOH . 
E 5 HOH A 105 388 109 HOH HOH . 
E 5 HOH A 106 389 110 HOH HOH . 
E 5 HOH A 107 390 111 HOH HOH . 
E 5 HOH A 108 391 112 HOH HOH . 
E 5 HOH A 109 392 113 HOH HOH . 
E 5 HOH A 110 393 114 HOH HOH . 
E 5 HOH A 111 394 115 HOH HOH . 
E 5 HOH A 112 395 116 HOH HOH . 
E 5 HOH A 113 396 117 HOH HOH . 
E 5 HOH A 114 397 118 HOH HOH . 
E 5 HOH A 115 398 119 HOH HOH . 
E 5 HOH A 116 399 120 HOH HOH . 
E 5 HOH A 117 400 121 HOH HOH . 
E 5 HOH A 118 401 122 HOH HOH . 
E 5 HOH A 119 402 123 HOH HOH . 
E 5 HOH A 120 403 124 HOH HOH . 
E 5 HOH A 121 404 125 HOH HOH . 
E 5 HOH A 122 405 126 HOH HOH . 
E 5 HOH A 123 406 127 HOH HOH . 
E 5 HOH A 124 407 128 HOH HOH . 
E 5 HOH A 125 408 129 HOH HOH . 
E 5 HOH A 126 409 130 HOH HOH . 
E 5 HOH A 127 410 131 HOH HOH . 
E 5 HOH A 128 411 132 HOH HOH . 
E 5 HOH A 129 412 133 HOH HOH . 
E 5 HOH A 130 413 134 HOH HOH . 
E 5 HOH A 131 414 135 HOH HOH . 
E 5 HOH A 132 415 136 HOH HOH . 
E 5 HOH A 133 416 137 HOH HOH . 
E 5 HOH A 134 417 138 HOH HOH . 
E 5 HOH A 135 418 139 HOH HOH . 
E 5 HOH A 136 419 140 HOH HOH . 
E 5 HOH A 137 420 141 HOH HOH . 
E 5 HOH A 138 421 142 HOH HOH . 
E 5 HOH A 139 422 143 HOH HOH . 
E 5 HOH A 140 423 144 HOH HOH . 
E 5 HOH A 141 424 145 HOH HOH . 
E 5 HOH A 142 425 146 HOH HOH . 
E 5 HOH A 143 426 147 HOH HOH . 
E 5 HOH A 144 427 148 HOH HOH . 
E 5 HOH A 145 428 149 HOH HOH . 
E 5 HOH A 146 429 150 HOH HOH . 
E 5 HOH A 147 430 151 HOH HOH . 
E 5 HOH A 148 431 152 HOH HOH . 
E 5 HOH A 149 432 153 HOH HOH . 
E 5 HOH A 150 433 154 HOH HOH . 
E 5 HOH A 151 434 155 HOH HOH . 
E 5 HOH A 152 435 156 HOH HOH . 
E 5 HOH A 153 436 157 HOH HOH . 
E 5 HOH A 154 437 158 HOH HOH . 
E 5 HOH A 155 438 159 HOH HOH . 
E 5 HOH A 156 439 160 HOH HOH . 
E 5 HOH A 157 440 161 HOH HOH . 
E 5 HOH A 158 441 162 HOH HOH . 
E 5 HOH A 159 442 163 HOH HOH . 
E 5 HOH A 160 443 164 HOH HOH . 
E 5 HOH A 161 444 165 HOH HOH . 
E 5 HOH A 162 445 166 HOH HOH . 
E 5 HOH A 163 446 167 HOH HOH . 
E 5 HOH A 164 447 168 HOH HOH . 
E 5 HOH A 165 448 169 HOH HOH . 
E 5 HOH A 166 449 170 HOH HOH . 
E 5 HOH A 167 450 171 HOH HOH . 
E 5 HOH A 168 451 172 HOH HOH . 
E 5 HOH A 169 452 173 HOH HOH . 
E 5 HOH A 170 453 174 HOH HOH . 
E 5 HOH A 171 454 175 HOH HOH . 
E 5 HOH A 172 455 176 HOH HOH . 
E 5 HOH A 173 456 177 HOH HOH . 
E 5 HOH A 174 457 178 HOH HOH . 
E 5 HOH A 175 458 179 HOH HOH . 
E 5 HOH A 176 459 180 HOH HOH . 
E 5 HOH A 177 460 182 HOH HOH . 
E 5 HOH A 178 461 183 HOH HOH . 
E 5 HOH A 179 462 184 HOH HOH . 
E 5 HOH A 180 463 185 HOH HOH . 
E 5 HOH A 181 464 186 HOH HOH . 
E 5 HOH A 182 465 187 HOH HOH . 
E 5 HOH A 183 466 188 HOH HOH . 
E 5 HOH A 184 467 189 HOH HOH . 
E 5 HOH A 185 468 190 HOH HOH . 
E 5 HOH A 186 469 191 HOH HOH . 
E 5 HOH A 187 470 192 HOH HOH . 
E 5 HOH A 188 471 193 HOH HOH . 
E 5 HOH A 189 472 194 HOH HOH . 
E 5 HOH A 190 473 195 HOH HOH . 
E 5 HOH A 191 474 196 HOH HOH . 
E 5 HOH A 192 475 197 HOH HOH . 
E 5 HOH A 193 476 198 HOH HOH . 
E 5 HOH A 194 477 199 HOH HOH . 
E 5 HOH A 195 478 200 HOH HOH . 
E 5 HOH A 196 479 201 HOH HOH . 
E 5 HOH A 197 480 202 HOH HOH . 
E 5 HOH A 198 481 203 HOH HOH . 
E 5 HOH A 199 482 204 HOH HOH . 
E 5 HOH A 200 483 205 HOH HOH . 
E 5 HOH A 201 484 206 HOH HOH . 
E 5 HOH A 202 485 207 HOH HOH . 
E 5 HOH A 203 486 208 HOH HOH . 
E 5 HOH A 204 487 209 HOH HOH . 
E 5 HOH A 205 488 210 HOH HOH . 
E 5 HOH A 206 489 211 HOH HOH . 
E 5 HOH A 207 490 212 HOH HOH . 
E 5 HOH A 208 491 213 HOH HOH . 
E 5 HOH A 209 492 214 HOH HOH . 
E 5 HOH A 210 493 215 HOH HOH . 
E 5 HOH A 211 494 216 HOH HOH . 
E 5 HOH A 212 495 217 HOH HOH . 
E 5 HOH A 213 496 218 HOH HOH . 
E 5 HOH A 214 497 219 HOH HOH . 
E 5 HOH A 215 498 220 HOH HOH . 
E 5 HOH A 216 499 221 HOH HOH . 
E 5 HOH A 217 500 222 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DHB . . . C 3 1.935 -2.243 20.931 1 21.44 ? C1 DHB 282 A 1 
HETATM 2 C C2 DHB . . . C 3 2.293 -3.128 19.899 1 21.94 ? C2 DHB 282 A 1 
HETATM 3 C C3 DHB . . . C 3 3.112 -2.703 18.872 1 21.56 ? C3 DHB 282 A 1 
HETATM 4 O O3 DHB . . . C 3 3.446 -3.521 17.858 1 21.62 ? O3 DHB 282 A 1 
HETATM 5 C C4 DHB . . . C 3 3.572 -1.298 18.893 1 21.92 ? C4 DHB 282 A 1 
HETATM 6 O O4 DHB . . . C 3 4.371 -0.889 17.897 1 21.6 ? O4 DHB 282 A 1 
HETATM 7 C C5 DHB . . . C 3 3.202 -0.44 19.937 1 20.57 ? C5 DHB 282 A 1 
HETATM 8 C C6 DHB . . . C 3 2.379 -0.914 20.957 1 21.1 ? C6 DHB 282 A 1 
HETATM 9 C C DHB . . . C 3 1.067 -2.776 22.038 1 21.82 ? C DHB 282 A 1 
HETATM 10 O O1 DHB . . . C 3 1.129 -2.212 23.152 1 19.67 ? O1 DHB 282 A 1 
HETATM 11 O O2 DHB . . . C 3 0.321 -3.787 21.817 1 24.3 ? O2 DHB 282 A 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           43 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           1054 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#