data_3HLE # _model_server_result.job_id zi3sDcZ4azqZwgeP0tqVDA _model_server_result.datetime_utc '2024-12-26 05:24:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hle # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":414}' # _entry.id 3HLE # _exptl.entry_id 3HLE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HLE _cell.length_a 58.062 _cell.length_b 75.321 _cell.length_c 133.026 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HLE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 83 n n S1 HS1 DTT sing 84 n n C1 C2 DTT sing 85 n n C1 H11 DTT sing 86 n n C1 H12 DTT sing 87 n n C2 O2 DTT sing 88 n n C2 C3 DTT sing 89 n n C2 H2 DTT sing 90 n n O2 HO2 DTT sing 91 n n C3 O3 DTT sing 92 n n C3 C4 DTT sing 93 n n C3 H3 DTT sing 94 n n O3 HO3 DTT sing 95 n n C4 S4 DTT sing 96 n n C4 H41 DTT sing 97 n n C4 H42 DTT sing 98 n n S4 HS2 DTT sing 99 n n # _atom_sites.entry_id 3HLE _atom_sites.fract_transf_matrix[1][1] 0.017223 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MJA A 1 500 500 MJA MJA . C 3 DTT A 1 414 414 DTT DTT . D 4 HOH A 1 415 415 HOH HOH . D 4 HOH A 2 416 416 HOH HOH . D 4 HOH A 3 417 417 HOH HOH . D 4 HOH A 4 418 418 HOH HOH . D 4 HOH A 5 419 419 HOH HOH . D 4 HOH A 6 420 420 HOH HOH . D 4 HOH A 7 421 421 HOH HOH . D 4 HOH A 8 422 422 HOH HOH . D 4 HOH A 9 423 423 HOH HOH . D 4 HOH A 10 424 424 HOH HOH . D 4 HOH A 11 425 425 HOH HOH . D 4 HOH A 12 426 426 HOH HOH . D 4 HOH A 13 427 427 HOH HOH . D 4 HOH A 14 428 428 HOH HOH . D 4 HOH A 15 429 429 HOH HOH . D 4 HOH A 16 430 430 HOH HOH . D 4 HOH A 17 431 431 HOH HOH . D 4 HOH A 18 432 432 HOH HOH . D 4 HOH A 19 433 433 HOH HOH . D 4 HOH A 20 434 434 HOH HOH . D 4 HOH A 21 435 435 HOH HOH . D 4 HOH A 22 436 436 HOH HOH . D 4 HOH A 23 437 437 HOH HOH . D 4 HOH A 24 438 438 HOH HOH . D 4 HOH A 25 439 439 HOH HOH . D 4 HOH A 26 440 440 HOH HOH . D 4 HOH A 27 441 441 HOH HOH . D 4 HOH A 28 442 442 HOH HOH . D 4 HOH A 29 443 443 HOH HOH . D 4 HOH A 30 444 444 HOH HOH . D 4 HOH A 31 445 445 HOH HOH . D 4 HOH A 32 446 446 HOH HOH . D 4 HOH A 33 447 447 HOH HOH . D 4 HOH A 34 448 448 HOH HOH . D 4 HOH A 35 449 449 HOH HOH . D 4 HOH A 36 450 450 HOH HOH . D 4 HOH A 37 451 451 HOH HOH . D 4 HOH A 38 452 452 HOH HOH . D 4 HOH A 39 453 453 HOH HOH . D 4 HOH A 40 454 454 HOH HOH . D 4 HOH A 41 455 455 HOH HOH . D 4 HOH A 42 456 456 HOH HOH . D 4 HOH A 43 457 457 HOH HOH . D 4 HOH A 44 458 458 HOH HOH . D 4 HOH A 45 459 459 HOH HOH . D 4 HOH A 46 460 460 HOH HOH . D 4 HOH A 47 461 461 HOH HOH . D 4 HOH A 48 462 462 HOH HOH . D 4 HOH A 49 463 463 HOH HOH . D 4 HOH A 50 464 464 HOH HOH . D 4 HOH A 51 465 465 HOH HOH . D 4 HOH A 52 466 466 HOH HOH . D 4 HOH A 53 467 467 HOH HOH . D 4 HOH A 54 468 468 HOH HOH . D 4 HOH A 55 469 469 HOH HOH . D 4 HOH A 56 470 470 HOH HOH . D 4 HOH A 57 471 471 HOH HOH . D 4 HOH A 58 472 472 HOH HOH . D 4 HOH A 59 473 473 HOH HOH . D 4 HOH A 60 474 474 HOH HOH . D 4 HOH A 61 475 475 HOH HOH . D 4 HOH A 62 476 476 HOH HOH . D 4 HOH A 63 477 477 HOH HOH . D 4 HOH A 64 478 478 HOH HOH . D 4 HOH A 65 479 479 HOH HOH . D 4 HOH A 66 480 480 HOH HOH . D 4 HOH A 67 481 481 HOH HOH . D 4 HOH A 68 482 482 HOH HOH . D 4 HOH A 69 483 483 HOH HOH . D 4 HOH A 70 484 484 HOH HOH . D 4 HOH A 71 485 485 HOH HOH . D 4 HOH A 72 486 486 HOH HOH . D 4 HOH A 73 487 487 HOH HOH . D 4 HOH A 74 488 488 HOH HOH . D 4 HOH A 75 489 489 HOH HOH . D 4 HOH A 76 490 490 HOH HOH . D 4 HOH A 77 491 491 HOH HOH . D 4 HOH A 78 492 492 HOH HOH . D 4 HOH A 79 493 493 HOH HOH . D 4 HOH A 80 494 494 HOH HOH . D 4 HOH A 81 495 495 HOH HOH . D 4 HOH A 82 496 496 HOH HOH . D 4 HOH A 83 497 497 HOH HOH . D 4 HOH A 84 498 498 HOH HOH . D 4 HOH A 85 499 499 HOH HOH . D 4 HOH A 86 501 501 HOH HOH . D 4 HOH A 87 502 502 HOH HOH . D 4 HOH A 88 503 503 HOH HOH . D 4 HOH A 89 504 504 HOH HOH . D 4 HOH A 90 505 505 HOH HOH . D 4 HOH A 91 506 506 HOH HOH . D 4 HOH A 92 507 507 HOH HOH . D 4 HOH A 93 508 508 HOH HOH . D 4 HOH A 94 509 509 HOH HOH . D 4 HOH A 95 510 510 HOH HOH . D 4 HOH A 96 511 511 HOH HOH . D 4 HOH A 97 512 512 HOH HOH . D 4 HOH A 98 513 513 HOH HOH . D 4 HOH A 99 514 514 HOH HOH . D 4 HOH A 100 515 515 HOH HOH . D 4 HOH A 101 516 516 HOH HOH . D 4 HOH A 102 517 517 HOH HOH . D 4 HOH A 103 518 518 HOH HOH . D 4 HOH A 104 519 519 HOH HOH . D 4 HOH A 105 520 520 HOH HOH . D 4 HOH A 106 521 521 HOH HOH . D 4 HOH A 107 522 522 HOH HOH . D 4 HOH A 108 523 523 HOH HOH . D 4 HOH A 109 524 524 HOH HOH . D 4 HOH A 110 525 525 HOH HOH . D 4 HOH A 111 526 526 HOH HOH . D 4 HOH A 112 527 527 HOH HOH . D 4 HOH A 113 528 528 HOH HOH . D 4 HOH A 114 529 529 HOH HOH . D 4 HOH A 115 530 530 HOH HOH . D 4 HOH A 116 531 531 HOH HOH . D 4 HOH A 117 532 532 HOH HOH . D 4 HOH A 118 533 533 HOH HOH . D 4 HOH A 119 534 534 HOH HOH . D 4 HOH A 120 535 535 HOH HOH . D 4 HOH A 121 536 536 HOH HOH . D 4 HOH A 122 537 537 HOH HOH . D 4 HOH A 123 538 538 HOH HOH . D 4 HOH A 124 539 539 HOH HOH . D 4 HOH A 125 540 540 HOH HOH . D 4 HOH A 126 541 541 HOH HOH . D 4 HOH A 127 542 542 HOH HOH . D 4 HOH A 128 543 543 HOH HOH . D 4 HOH A 129 544 544 HOH HOH . D 4 HOH A 130 545 545 HOH HOH . D 4 HOH A 131 546 546 HOH HOH . D 4 HOH A 132 547 547 HOH HOH . D 4 HOH A 133 548 548 HOH HOH . D 4 HOH A 134 549 549 HOH HOH . D 4 HOH A 135 550 550 HOH HOH . D 4 HOH A 136 551 551 HOH HOH . D 4 HOH A 137 552 552 HOH HOH . D 4 HOH A 138 553 553 HOH HOH . D 4 HOH A 139 554 554 HOH HOH . D 4 HOH A 140 555 555 HOH HOH . D 4 HOH A 141 556 556 HOH HOH . D 4 HOH A 142 557 557 HOH HOH . D 4 HOH A 143 558 558 HOH HOH . D 4 HOH A 144 559 559 HOH HOH . D 4 HOH A 145 560 560 HOH HOH . D 4 HOH A 146 561 561 HOH HOH . D 4 HOH A 147 562 562 HOH HOH . D 4 HOH A 148 563 563 HOH HOH . D 4 HOH A 149 564 564 HOH HOH . D 4 HOH A 150 565 565 HOH HOH . D 4 HOH A 151 566 566 HOH HOH . D 4 HOH A 152 567 567 HOH HOH . D 4 HOH A 153 568 568 HOH HOH . D 4 HOH A 154 569 569 HOH HOH . D 4 HOH A 155 570 570 HOH HOH . D 4 HOH A 156 571 571 HOH HOH . D 4 HOH A 157 572 572 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . C 3 2.039 30.28 -22.084 1 64.12 ? S1 DTT 414 A 1 HETATM 2 C C1 DTT . . . C 3 0.898 30.819 -23.382 1 69.41 ? C1 DTT 414 A 1 HETATM 3 C C2 DTT . . . C 3 -0.55 30.942 -22.892 1 72.7 ? C2 DTT 414 A 1 HETATM 4 O O2 DTT . . . C 3 -1.444 30.587 -23.927 1 70.31 ? O2 DTT 414 A 1 HETATM 5 C C3 DTT . . . C 3 -0.925 32.343 -22.401 1 76.8 ? C3 DTT 414 A 1 HETATM 6 O O3 DTT . . . C 3 -0.569 33.312 -23.367 1 76.39 ? O3 DTT 414 A 1 HETATM 7 C C4 DTT . . . C 3 -0.277 32.645 -21.048 1 79.54 ? C4 DTT 414 A 1 HETATM 8 S S4 DTT . . . C 3 -0.167 34.414 -20.674 1 84.64 ? S4 DTT 414 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #