data_3HM8
#
_model_server_result.job_id            FZceEPG2OYoznHVImIsjxw 
_model_server_result.datetime_utc      '2024-12-26 21:37:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hm8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1001}' 
#
_entry.id    3HM8 
#
_exptl.entry_id    3HM8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HM8 
_cell.length_a            83.904 
_cell.length_b            83.904 
_cell.length_c            323.327 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HM8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
PISA monomeric 1 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F 1 1 
B,G,H 2 1 
C,I,J 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-glucose;D-glucose;glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GLC sing 112 n n 
C1 O1 GLC sing 113 n n 
C1 O5 GLC sing 114 n n 
C1 H1 GLC sing 115 n n 
C2 C3 GLC sing 116 n n 
C2 O2 GLC sing 117 n n 
C2 H2 GLC sing 118 n n 
C3 C4 GLC sing 119 n n 
C3 O3 GLC sing 120 n n 
C3 H3 GLC sing 121 n n 
C4 C5 GLC sing 122 n n 
C4 O4 GLC sing 123 n n 
C4 H4 GLC sing 124 n n 
C5 C6 GLC sing 125 n n 
C5 O5 GLC sing 126 n n 
C5 H5 GLC sing 127 n n 
C6 O6 GLC sing 128 n n 
C6 H61 GLC sing 129 n n 
C6 H62 GLC sing 130 n n 
O1 HO1 GLC sing 131 n n 
O2 HO2 GLC sing 132 n n 
O3 HO3 GLC sing 133 n n 
O4 HO4 GLC sing 134 n n 
O6 HO6 GLC sing 135 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GLC a-D-glucopyranose 'COMMON NAME' GMML 1 
GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3HM8 
_atom_sites.fract_transf_matrix[1][1]    0.011918 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011918 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003093 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GLC A 1 1001 1001 GLC GLC . 
F 3 BG6 A 1 1002 1002 BG6 BG6 . 
G 2 GLC B 1 1001 1001 GLC GLC . 
H 3 BG6 B 1 1002 1002 BG6 BG6 . 
I 2 GLC C 1 1001 1001 GLC GLC . 
J 3 BG6 C 1 1002 1002 BG6 BG6 . 
K 2 GLC D 1 1001 1001 GLC GLC . 
L 3 BG6 D 1 1002 1002 BG6 BG6 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GLC . . . K 2 50.897 38.96 -19.824 1 71.54 ? C1 GLC 1001 D 1 
HETATM 2 C C2 GLC . . . K 2 50.643 40.177 -18.948 1 71.75 ? C2 GLC 1001 D 1 
HETATM 3 C C3 GLC . . . K 2 50.75 41.492 -19.748 1 71.19 ? C3 GLC 1001 D 1 
HETATM 4 C C4 GLC . . . K 2 52.032 41.548 -20.609 1 70.95 ? C4 GLC 1001 D 1 
HETATM 5 C C5 GLC . . . K 2 52.241 40.237 -21.385 1 70.82 ? C5 GLC 1001 D 1 
HETATM 6 C C6 GLC . . . K 2 53.609 40.228 -22.216 1 71.6 ? C6 GLC 1001 D 1 
HETATM 7 O O1 GLC . . . K 2 49.815 38.88 -20.756 1 70.69 ? O1 GLC 1001 D 1 
HETATM 8 O O2 GLC . . . K 2 49.345 40.077 -18.386 1 71.86 ? O2 GLC 1001 D 1 
HETATM 9 O O3 GLC . . . K 2 50.759 42.585 -18.825 1 72.21 ? O3 GLC 1001 D 1 
HETATM 10 O O4 GLC . . . K 2 51.997 42.669 -21.472 1 69.88 ? O4 GLC 1001 D 1 
HETATM 11 O O5 GLC . . . K 2 52.194 39.099 -20.472 1 71.62 ? O5 GLC 1001 D 1 
HETATM 12 O O6 GLC . . . K 2 54.741 40.395 -21.36 1 72.62 ? O6 GLC 1001 D 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           12 
#