data_3HMJ
#
_model_server_result.job_id            TDEP5LLIfD60vB6eDv7HLg 
_model_server_result.datetime_utc      '2024-11-14 21:44:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hmj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":3051}' 
#
_entry.id    3HMJ 
#
_exptl.entry_id    3HMJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HMJ 
_cell.length_a            231.884 
_cell.length_b            231.884 
_cell.length_c            756.784 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HMJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 117 n n 
N1 C10 FMN doub 118 n n 
C2 O2 FMN doub 119 n n 
C2 N3 FMN sing 120 n n 
N3 C4 FMN sing 121 n n 
N3 HN3 FMN sing 122 n n 
C4 O4 FMN doub 123 n n 
C4 C4A FMN sing 124 n n 
C4A N5 FMN doub 125 n n 
C4A C10 FMN sing 126 n n 
N5 C5A FMN sing 127 n n 
C5A C6 FMN doub 128 n y 
C5A C9A FMN sing 129 n y 
C6 C7 FMN sing 130 n y 
C6 H6 FMN sing 131 n n 
C7 C7M FMN sing 132 n n 
C7 C8 FMN doub 133 n y 
C7M HM71 FMN sing 134 n n 
C7M HM72 FMN sing 135 n n 
C7M HM73 FMN sing 136 n n 
C8 C8M FMN sing 137 n n 
C8 C9 FMN sing 138 n y 
C8M HM81 FMN sing 139 n n 
C8M HM82 FMN sing 140 n n 
C8M HM83 FMN sing 141 n n 
C9 C9A FMN doub 142 n y 
C9 H9 FMN sing 143 n n 
C9A N10 FMN sing 144 n n 
N10 C10 FMN sing 145 n n 
N10 C1' FMN sing 146 n n 
C1' C2' FMN sing 147 n n 
C1' "H1'1" FMN sing 148 n n 
C1' "H1'2" FMN sing 149 n n 
C2' O2' FMN sing 150 n n 
C2' C3' FMN sing 151 n n 
C2' H2' FMN sing 152 n n 
O2' HO2' FMN sing 153 n n 
C3' O3' FMN sing 154 n n 
C3' C4' FMN sing 155 n n 
C3' H3' FMN sing 156 n n 
O3' HO3' FMN sing 157 n n 
C4' O4' FMN sing 158 n n 
C4' C5' FMN sing 159 n n 
C4' H4' FMN sing 160 n n 
O4' HO4' FMN sing 161 n n 
C5' O5' FMN sing 162 n n 
C5' "H5'1" FMN sing 163 n n 
C5' "H5'2" FMN sing 164 n n 
O5' P FMN sing 165 n n 
P O1P FMN doub 166 n n 
P O2P FMN sing 167 n n 
P O3P FMN sing 168 n n 
O2P HOP2 FMN sing 169 n n 
O3P HOP3 FMN sing 170 n n 
#
_atom_sites.entry_id                     3HMJ 
_atom_sites.fract_transf_matrix[1][1]    0.004313 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001321 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 CER A 1 2748 2748 CER CER . 
H 3 CER B 1 2748 2748 CER CER . 
I 3 CER C 1 2748 2748 CER CER . 
J 4 FMN G 1 3051 3051 FMN FMN . 
K 4 FMN H 1 3051 3051 FMN FMN . 
L 4 FMN I 1 3051 3051 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . J 4 123.213 -6.616 38.129 1 157.31 ? N1 FMN 3051 G 1 
HETATM 2 C C2 FMN . . . J 4 123.929 -5.574 37.268 1 148.31 ? C2 FMN 3051 G 1 
HETATM 3 O O2 FMN . . . J 4 124.515 -4.47 37.904 1 203.77 ? O2 FMN 3051 G 1 
HETATM 4 N N3 FMN . . . J 4 124.008 -5.741 35.758 1 162.89 ? N3 FMN 3051 G 1 
HETATM 5 C C4 FMN . . . J 4 123.394 -6.922 35.072 1 166.09 ? C4 FMN 3051 G 1 
HETATM 6 O O4 FMN . . . J 4 123.471 -7.056 33.659 1 141.27 ? O4 FMN 3051 G 1 
HETATM 7 C C4A FMN . . . J 4 122.683 -7.968 35.935 1 135.11 ? C4A FMN 3051 G 1 
HETATM 8 N N5 FMN . . . J 4 122.04 -9.181 35.307 1 158.5 ? N5 FMN 3051 G 1 
HETATM 9 C C5A FMN . . . J 4 121.327 -10.192 36.172 1 158.65 ? C5A FMN 3051 G 1 
HETATM 10 C C6 FMN . . . J 4 120.651 -11.453 35.498 1 165.31 ? C6 FMN 3051 G 1 
HETATM 11 C C7 FMN . . . J 4 119.908 -12.505 36.404 1 170.66 ? C7 FMN 3051 G 1 
HETATM 12 C C7M FMN . . . J 4 119.254 -13.737 35.743 1 163.27 ? C7M FMN 3051 G 1 
HETATM 13 C C8 FMN . . . J 4 119.839 -12.305 37.966 1 159.49 ? C8 FMN 3051 G 1 
HETATM 14 C C8M FMN . . . J 4 119.129 -13.324 38.877 1 153.12 ? C8M FMN 3051 G 1 
HETATM 15 C C9 FMN . . . J 4 120.505 -11.062 38.619 1 149.26 ? C9 FMN 3051 G 1 
HETATM 16 C C9A FMN . . . J 4 121.253 -9.995 37.705 1 149.56 ? C9A FMN 3051 G 1 
HETATM 17 N N10 FMN . . . J 4 121.903 -8.802 38.336 1 156.93 ? N10 FMN 3051 G 1 
HETATM 18 C C10 FMN . . . J 4 122.611 -7.789 37.467 1 160.97 ? C10 FMN 3051 G 1 
HETATM 19 C C1' FMN . . . J 4 121.843 -8.558 39.784 1 161.44 ? C1' FMN 3051 G 1 
HETATM 20 C C2' FMN . . . J 4 120.406 -8.038 40.117 1 165.66 ? C2' FMN 3051 G 1 
HETATM 21 O O2' FMN . . . J 4 120.173 -6.849 39.389 1 148.99 ? O2' FMN 3051 G 1 
HETATM 22 C C3' FMN . . . J 4 120.256 -7.733 41.627 1 147.92 ? C3' FMN 3051 G 1 
HETATM 23 O O3' FMN . . . J 4 121.363 -6.999 42.11 1 136.28 ? O3' FMN 3051 G 1 
HETATM 24 C C4' FMN . . . J 4 120.122 -9.077 42.366 1 160.31 ? C4' FMN 3051 G 1 
HETATM 25 O O4' FMN . . . J 4 119.511 -9.991 41.473 1 169.48 ? O4' FMN 3051 G 1 
HETATM 26 C C5' FMN . . . J 4 119.149 -8.918 43.544 1 146.83 ? C5' FMN 3051 G 1 
HETATM 27 O O5' FMN . . . J 4 119.204 -10.142 44.221 1 184.95 ? O5' FMN 3051 G 1 
HETATM 28 P P FMN . . . J 4 117.836 -11.047 44.306 1 177.04 ? P FMN 3051 G 1 
HETATM 29 O O1P FMN . . . J 4 118.024 -12.137 45.277 1 168.65 ? O1P FMN 3051 G 1 
HETATM 30 O O2P FMN . . . J 4 116.588 -10.036 44.707 1 188.01 ? O2P FMN 3051 G 1 
HETATM 31 O O3P FMN . . . J 4 117.599 -11.691 42.812 1 146.48 ? O3P FMN 3051 G 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    337 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          49 
_model_server_stats.element_count           31 
#