data_3HMJ
#
_model_server_result.job_id            QtcRSZ9_qnjFPsA0k1Z27Q 
_model_server_result.datetime_utc      '2024-11-14 21:59:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hmj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":3051}' 
#
_entry.id    3HMJ 
#
_exptl.entry_id    3HMJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HMJ 
_cell.length_a            231.884 
_cell.length_b            231.884 
_cell.length_c            756.784 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HMJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 117 n n 
N1 C10 FMN doub 118 n n 
C2 O2 FMN doub 119 n n 
C2 N3 FMN sing 120 n n 
N3 C4 FMN sing 121 n n 
N3 HN3 FMN sing 122 n n 
C4 O4 FMN doub 123 n n 
C4 C4A FMN sing 124 n n 
C4A N5 FMN doub 125 n n 
C4A C10 FMN sing 126 n n 
N5 C5A FMN sing 127 n n 
C5A C6 FMN doub 128 n y 
C5A C9A FMN sing 129 n y 
C6 C7 FMN sing 130 n y 
C6 H6 FMN sing 131 n n 
C7 C7M FMN sing 132 n n 
C7 C8 FMN doub 133 n y 
C7M HM71 FMN sing 134 n n 
C7M HM72 FMN sing 135 n n 
C7M HM73 FMN sing 136 n n 
C8 C8M FMN sing 137 n n 
C8 C9 FMN sing 138 n y 
C8M HM81 FMN sing 139 n n 
C8M HM82 FMN sing 140 n n 
C8M HM83 FMN sing 141 n n 
C9 C9A FMN doub 142 n y 
C9 H9 FMN sing 143 n n 
C9A N10 FMN sing 144 n n 
N10 C10 FMN sing 145 n n 
N10 C1' FMN sing 146 n n 
C1' C2' FMN sing 147 n n 
C1' "H1'1" FMN sing 148 n n 
C1' "H1'2" FMN sing 149 n n 
C2' O2' FMN sing 150 n n 
C2' C3' FMN sing 151 n n 
C2' H2' FMN sing 152 n n 
O2' HO2' FMN sing 153 n n 
C3' O3' FMN sing 154 n n 
C3' C4' FMN sing 155 n n 
C3' H3' FMN sing 156 n n 
O3' HO3' FMN sing 157 n n 
C4' O4' FMN sing 158 n n 
C4' C5' FMN sing 159 n n 
C4' H4' FMN sing 160 n n 
O4' HO4' FMN sing 161 n n 
C5' O5' FMN sing 162 n n 
C5' "H5'1" FMN sing 163 n n 
C5' "H5'2" FMN sing 164 n n 
O5' P FMN sing 165 n n 
P O1P FMN doub 166 n n 
P O2P FMN sing 167 n n 
P O3P FMN sing 168 n n 
O2P HOP2 FMN sing 169 n n 
O3P HOP3 FMN sing 170 n n 
#
_atom_sites.entry_id                     3HMJ 
_atom_sites.fract_transf_matrix[1][1]    0.004313 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001321 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 CER A 1 2748 2748 CER CER . 
H 3 CER B 1 2748 2748 CER CER . 
I 3 CER C 1 2748 2748 CER CER . 
J 4 FMN G 1 3051 3051 FMN FMN . 
K 4 FMN H 1 3051 3051 FMN FMN . 
L 4 FMN I 1 3051 3051 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . K 4 223.614 28.033 101.65 1 163.57 ? N1 FMN 3051 H 1 
HETATM 2 C C2 FMN . . . K 4 222.528 27.267 100.9 1 149.99 ? C2 FMN 3051 H 1 
HETATM 3 O O2 FMN . . . K 4 221.457 28.001 100.354 1 183.35 ? O2 FMN 3051 H 1 
HETATM 4 N N3 FMN . . . K 4 222.636 25.748 100.758 1 175.57 ? N3 FMN 3051 H 1 
HETATM 5 C C4 FMN . . . K 4 223.794 24.986 101.341 1 169.21 ? C4 FMN 3051 H 1 
HETATM 6 O O4 FMN . . . K 4 223.877 23.576 101.203 1 144.92 ? O4 FMN 3051 H 1 
HETATM 7 C C4A FMN . . . K 4 224.872 25.774 102.081 1 131.02 ? C4A FMN 3051 H 1 
HETATM 8 N N5 FMN . . . K 4 226.05 25.069 102.692 1 157.53 ? N5 FMN 3051 H 1 
HETATM 9 C C5A FMN . . . K 4 227.098 25.859 103.433 1 154.73 ? C5A FMN 3051 H 1 
HETATM 10 C C6 FMN . . . K 4 228.329 25.108 104.075 1 165.54 ? C6 FMN 3051 H 1 
HETATM 11 C C7 FMN . . . K 4 229.421 25.919 104.85 1 154.89 ? C7 FMN 3051 H 1 
HETATM 12 C C7M FMN . . . K 4 230.618 25.162 105.462 1 155.08 ? C7M FMN 3051 H 1 
HETATM 13 C C8 FMN . . . K 4 229.283 27.479 104.985 1 159.55 ? C8 FMN 3051 H 1 
HETATM 14 C C8M FMN . . . K 4 230.342 28.306 105.735 1 161.43 ? C8M FMN 3051 H 1 
HETATM 15 C C9 FMN . . . K 4 228.072 28.224 104.364 1 143.13 ? C9 FMN 3051 H 1 
HETATM 16 C C9A FMN . . . K 4 226.968 27.388 103.584 1 148.35 ? C9A FMN 3051 H 1 
HETATM 17 N N10 FMN . . . K 4 225.808 28.093 102.962 1 157.27 ? N10 FMN 3051 H 1 
HETATM 18 C C10 FMN . . . K 4 224.76 27.299 102.215 1 155.41 ? C10 FMN 3051 H 1 
HETATM 19 C C1' FMN . . . K 4 225.626 29.544 103.095 1 159.61 ? C1' FMN 3051 H 1 
HETATM 20 C C2' FMN . . . K 4 225.098 29.829 104.543 1 167.62 ? C2' FMN 3051 H 1 
HETATM 21 O O2' FMN . . . K 4 223.856 29.181 104.748 1 141.18 ? O2' FMN 3051 H 1 
HETATM 22 C C3' FMN . . . K 4 224.857 31.34 104.75 1 159.95 ? C3' FMN 3051 H 1 
HETATM 23 O O3' FMN . . . K 4 224.164 31.867 103.626 1 135.22 ? O3' FMN 3051 H 1 
HETATM 24 C C4' FMN . . . K 4 226.233 32.012 104.951 1 163.42 ? C4' FMN 3051 H 1 
HETATM 25 O O4' FMN . . . K 4 227.113 31.06 105.523 1 160.69 ? O4' FMN 3051 H 1 
HETATM 26 C C5' FMN . . . K 4 226.109 33.161 105.964 1 143.46 ? C5' FMN 3051 H 1 
HETATM 27 O O5' FMN . . . K 4 227.364 33.779 105.928 1 181.66 ? O5' FMN 3051 H 1 
HETATM 28 P P FMN . . . K 4 228.285 33.773 107.288 1 178.7 ? P FMN 3051 H 1 
HETATM 29 O O1P FMN . . . K 4 229.396 34.722 107.147 1 164.71 ? O1P FMN 3051 H 1 
HETATM 30 O O2P FMN . . . K 4 227.31 34.182 108.563 1 186.06 ? O2P FMN 3051 H 1 
HETATM 31 O O3P FMN . . . K 4 228.86 32.232 107.444 1 142.45 ? O3P FMN 3051 H 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    115 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#