data_3HMP
#
_model_server_result.job_id            dtD175nF08KAr8RhyoQmLQ 
_model_server_result.datetime_utc      '2024-12-02 04:52:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hmp 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2}' 
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_entry.id    3HMP 
#
_exptl.entry_id    3HMP 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HMP 
_cell.length_a            71.37 
_cell.length_b            103.93 
_cell.length_c            111.73 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3HMP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1 
A,B,C,D,E,F,G,H,I,J,K 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -71.37 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 209 n n 
C1 C2 GOL sing 210 n n 
C1 H11 GOL sing 211 n n 
C1 H12 GOL sing 212 n n 
O1 HO1 GOL sing 213 n n 
C2 O2 GOL sing 214 n n 
C2 C3 GOL sing 215 n n 
C2 H2 GOL sing 216 n n 
O2 HO2 GOL sing 217 n n 
C3 O3 GOL sing 218 n n 
C3 H31 GOL sing 219 n n 
C3 H32 GOL sing 220 n n 
O3 HO3 GOL sing 221 n n 
#
_atom_sites.entry_id                     3HMP 
_atom_sites.fract_transf_matrix[1][1]    0.014011 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009622 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00895 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CX4 A 1 1 1 CX4 CX4 . 
C 3 7PE A 1 1153 1153 7PE 7PE . 
D 4 PEG A 1 810 1 PEG PEG . 
E 5 GOL A 1 811 1 GOL GOL . 
F 5 GOL A 1 2 2 GOL GOL . 
G 5 GOL A 1 3 3 GOL GOL . 
H 6 IPA A 1 812 1 IPA IPA . 
I 6 IPA A 1 813 2 IPA IPA . 
J 6 IPA A 1 814 3 IPA IPA . 
K 7 HOH A 1 4 4 HOH HOH . 
K 7 HOH A 2 7 7 HOH HOH . 
K 7 HOH A 3 8 8 HOH HOH . 
K 7 HOH A 4 11 11 HOH HOH . 
K 7 HOH A 5 13 13 HOH HOH . 
K 7 HOH A 6 15 15 HOH HOH . 
K 7 HOH A 7 16 16 HOH HOH . 
K 7 HOH A 8 18 18 HOH HOH . 
K 7 HOH A 9 21 21 HOH HOH . 
K 7 HOH A 10 22 22 HOH HOH . 
K 7 HOH A 11 24 24 HOH HOH . 
K 7 HOH A 12 26 26 HOH HOH . 
K 7 HOH A 13 27 27 HOH HOH . 
K 7 HOH A 14 29 29 HOH HOH . 
K 7 HOH A 15 31 31 HOH HOH . 
K 7 HOH A 16 33 33 HOH HOH . 
K 7 HOH A 17 35 35 HOH HOH . 
K 7 HOH A 18 36 36 HOH HOH . 
K 7 HOH A 19 40 40 HOH HOH . 
K 7 HOH A 20 42 42 HOH HOH . 
K 7 HOH A 21 43 43 HOH HOH . 
K 7 HOH A 22 45 45 HOH HOH . 
K 7 HOH A 23 48 48 HOH HOH . 
K 7 HOH A 24 52 52 HOH HOH . 
K 7 HOH A 25 53 53 HOH HOH . 
K 7 HOH A 26 54 54 HOH HOH . 
K 7 HOH A 27 56 56 HOH HOH . 
K 7 HOH A 28 58 58 HOH HOH . 
K 7 HOH A 29 59 59 HOH HOH . 
K 7 HOH A 30 60 60 HOH HOH . 
K 7 HOH A 31 61 61 HOH HOH . 
K 7 HOH A 32 62 62 HOH HOH . 
K 7 HOH A 33 63 63 HOH HOH . 
K 7 HOH A 34 64 64 HOH HOH . 
K 7 HOH A 35 65 65 HOH HOH . 
K 7 HOH A 36 67 67 HOH HOH . 
K 7 HOH A 37 77 77 HOH HOH . 
K 7 HOH A 38 79 79 HOH HOH . 
K 7 HOH A 39 80 80 HOH HOH . 
K 7 HOH A 40 82 82 HOH HOH . 
K 7 HOH A 41 83 83 HOH HOH . 
K 7 HOH A 42 84 84 HOH HOH . 
K 7 HOH A 43 87 87 HOH HOH . 
K 7 HOH A 44 89 89 HOH HOH . 
K 7 HOH A 45 90 90 HOH HOH . 
K 7 HOH A 46 91 91 HOH HOH . 
K 7 HOH A 47 94 94 HOH HOH . 
K 7 HOH A 48 95 95 HOH HOH . 
K 7 HOH A 49 96 96 HOH HOH . 
K 7 HOH A 50 97 97 HOH HOH . 
K 7 HOH A 51 98 98 HOH HOH . 
K 7 HOH A 52 101 101 HOH HOH . 
K 7 HOH A 53 102 102 HOH HOH . 
K 7 HOH A 54 105 105 HOH HOH . 
K 7 HOH A 55 106 106 HOH HOH . 
K 7 HOH A 56 107 107 HOH HOH . 
K 7 HOH A 57 114 114 HOH HOH . 
K 7 HOH A 58 116 116 HOH HOH . 
K 7 HOH A 59 118 118 HOH HOH . 
K 7 HOH A 60 122 122 HOH HOH . 
K 7 HOH A 61 123 123 HOH HOH . 
K 7 HOH A 62 125 125 HOH HOH . 
K 7 HOH A 63 136 136 HOH HOH . 
K 7 HOH A 64 148 148 HOH HOH . 
K 7 HOH A 65 151 151 HOH HOH . 
K 7 HOH A 66 152 152 HOH HOH . 
K 7 HOH A 67 153 153 HOH HOH . 
K 7 HOH A 68 154 154 HOH HOH . 
K 7 HOH A 69 155 155 HOH HOH . 
K 7 HOH A 70 156 156 HOH HOH . 
K 7 HOH A 71 157 157 HOH HOH . 
K 7 HOH A 72 158 158 HOH HOH . 
K 7 HOH A 73 159 159 HOH HOH . 
K 7 HOH A 74 160 160 HOH HOH . 
K 7 HOH A 75 161 161 HOH HOH . 
K 7 HOH A 76 162 162 HOH HOH . 
K 7 HOH A 77 163 163 HOH HOH . 
K 7 HOH A 78 164 164 HOH HOH . 
K 7 HOH A 79 165 165 HOH HOH . 
K 7 HOH A 80 166 166 HOH HOH . 
K 7 HOH A 81 167 167 HOH HOH . 
K 7 HOH A 82 168 168 HOH HOH . 
K 7 HOH A 83 169 169 HOH HOH . 
K 7 HOH A 84 170 170 HOH HOH . 
K 7 HOH A 85 171 171 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 5 -32.791 -25.155 -7.506 1 52.29 ? C1 GOL 2 A 1 
HETATM 2 O O1 GOL . . . F 5 -32.511 -24.158 -6.547 1 52.67 ? O1 GOL 2 A 1 
HETATM 3 C C2 GOL . . . F 5 -34.004 -26.024 -7.137 1 51.45 ? C2 GOL 2 A 1 
HETATM 4 O O2 GOL . . . F 5 -35.196 -25.266 -7.142 1 48.95 ? O2 GOL 2 A 1 
HETATM 5 C C3 GOL . . . F 5 -34.137 -27.171 -8.143 1 51.82 ? C3 GOL 2 A 1 
HETATM 6 O O3 GOL . . . F 5 -34.396 -28.4 -7.5 1 52.91 ? O3 GOL 2 A 1 
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_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
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