data_3HN4 # _model_server_result.job_id sGR2abJSIyH2vLkvjaC3qA _model_server_result.datetime_utc '2024-12-23 09:45:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hn4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 3HN4 # _exptl.entry_id 3HN4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HN4 _cell.length_a 48.15 _cell.length_b 48.15 _cell.length_c 461.673 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HN4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 70 1_555 A SG CYS 71 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 49 A CYS 74 1_555 A SG CYS 59 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 103 A CYS 128 1_555 A SG CYS 181 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 124 A CYS 149 1_555 A SG CYS 164 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 152 A CYS 177 1_555 A SG CYS 176 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 A SG CYS 186 A CYS 211 1_555 A SG CYS 263 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 A SG CYS 207 A CYS 232 1_555 A SG CYS 246 A CYS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 A SG CYS 235 A CYS 260 1_555 A SG CYS 258 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 3HN4 _atom_sites.fract_transf_matrix[1][1] 0.020768 _atom_sites.fract_transf_matrix[1][2] 0.011991 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002166 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 1001 1001 EPE EPE . C 3 MPD A 1 1002 1002 MPD MPD . D 3 MPD A 1 1003 1003 MPD MPD . E 4 SO4 A 1 2001 2001 SO4 SO4 . F 4 SO4 A 1 2002 2002 SO4 SO4 . G 5 HOH A 1 3001 3001 HOH HOH . G 5 HOH A 2 3002 3002 HOH HOH . G 5 HOH A 3 3003 3003 HOH HOH . G 5 HOH A 4 3004 3004 HOH HOH . G 5 HOH A 5 3005 3005 HOH HOH . G 5 HOH A 6 3006 3006 HOH HOH . G 5 HOH A 7 3007 3007 HOH HOH . G 5 HOH A 8 3008 3008 HOH HOH . G 5 HOH A 9 3009 3009 HOH HOH . G 5 HOH A 10 3010 3010 HOH HOH . G 5 HOH A 11 3011 3011 HOH HOH . G 5 HOH A 12 3012 3012 HOH HOH . G 5 HOH A 13 3013 3013 HOH HOH . G 5 HOH A 14 3014 3014 HOH HOH . G 5 HOH A 15 3015 3015 HOH HOH . G 5 HOH A 16 3016 3016 HOH HOH . G 5 HOH A 17 3017 3017 HOH HOH . G 5 HOH A 18 3018 3018 HOH HOH . G 5 HOH A 19 3019 3019 HOH HOH . G 5 HOH A 20 3020 3020 HOH HOH . G 5 HOH A 21 3021 3021 HOH HOH . G 5 HOH A 22 3022 3022 HOH HOH . G 5 HOH A 23 3023 3023 HOH HOH . G 5 HOH A 24 3024 3024 HOH HOH . G 5 HOH A 25 3025 3025 HOH HOH . G 5 HOH A 26 3026 3026 HOH HOH . G 5 HOH A 27 3027 3027 HOH HOH . G 5 HOH A 28 3028 3028 HOH HOH . G 5 HOH A 29 3029 3029 HOH HOH . G 5 HOH A 30 3030 3030 HOH HOH . G 5 HOH A 31 3031 3031 HOH HOH . G 5 HOH A 32 3032 3032 HOH HOH . G 5 HOH A 33 3033 3033 HOH HOH . G 5 HOH A 34 3034 3034 HOH HOH . G 5 HOH A 35 3035 3035 HOH HOH . G 5 HOH A 36 3036 3036 HOH HOH . G 5 HOH A 37 3037 3037 HOH HOH . G 5 HOH A 38 3038 3038 HOH HOH . G 5 HOH A 39 3039 3039 HOH HOH . G 5 HOH A 40 3040 3040 HOH HOH . G 5 HOH A 41 3041 3041 HOH HOH . G 5 HOH A 42 3042 3042 HOH HOH . G 5 HOH A 43 3043 3043 HOH HOH . G 5 HOH A 44 3044 3044 HOH HOH . G 5 HOH A 45 3045 3045 HOH HOH . G 5 HOH A 46 3046 3046 HOH HOH . G 5 HOH A 47 3047 3047 HOH HOH . G 5 HOH A 48 3048 3048 HOH HOH . G 5 HOH A 49 3049 3049 HOH HOH . G 5 HOH A 50 3050 3050 HOH HOH . G 5 HOH A 51 3051 3051 HOH HOH . G 5 HOH A 52 3052 3052 HOH HOH . G 5 HOH A 53 3053 3053 HOH HOH . G 5 HOH A 54 3054 3054 HOH HOH . G 5 HOH A 55 3055 3055 HOH HOH . G 5 HOH A 56 3056 3056 HOH HOH . G 5 HOH A 57 3057 3057 HOH HOH . G 5 HOH A 58 3058 3058 HOH HOH . G 5 HOH A 59 3059 3059 HOH HOH . G 5 HOH A 60 3060 3060 HOH HOH . G 5 HOH A 61 3061 3061 HOH HOH . G 5 HOH A 62 3062 3062 HOH HOH . G 5 HOH A 63 3063 3063 HOH HOH . G 5 HOH A 64 3064 3064 HOH HOH . G 5 HOH A 65 3065 3065 HOH HOH . G 5 HOH A 66 3066 3066 HOH HOH . G 5 HOH A 67 3067 3067 HOH HOH . G 5 HOH A 68 3068 3068 HOH HOH . G 5 HOH A 69 3069 3069 HOH HOH . G 5 HOH A 70 3070 3070 HOH HOH . G 5 HOH A 71 3071 3071 HOH HOH . G 5 HOH A 72 3072 3072 HOH HOH . G 5 HOH A 73 3073 3073 HOH HOH . G 5 HOH A 74 3074 3074 HOH HOH . G 5 HOH A 75 3075 3075 HOH HOH . G 5 HOH A 76 3076 3076 HOH HOH . G 5 HOH A 77 3077 3077 HOH HOH . G 5 HOH A 78 3078 3078 HOH HOH . G 5 HOH A 79 3079 3079 HOH HOH . G 5 HOH A 80 3080 3080 HOH HOH . G 5 HOH A 81 3081 3081 HOH HOH . G 5 HOH A 82 3082 3082 HOH HOH . G 5 HOH A 83 3083 3083 HOH HOH . G 5 HOH A 84 3084 3084 HOH HOH . G 5 HOH A 85 3085 3085 HOH HOH . G 5 HOH A 86 3086 3086 HOH HOH . G 5 HOH A 87 3087 3087 HOH HOH . G 5 HOH A 88 3088 3088 HOH HOH . G 5 HOH A 89 3089 3089 HOH HOH . G 5 HOH A 90 3090 3090 HOH HOH . G 5 HOH A 91 3091 3091 HOH HOH . G 5 HOH A 92 3092 3092 HOH HOH . G 5 HOH A 93 3093 3093 HOH HOH . G 5 HOH A 94 3094 3094 HOH HOH . G 5 HOH A 95 3095 3095 HOH HOH . G 5 HOH A 96 3096 3096 HOH HOH . G 5 HOH A 97 3097 3097 HOH HOH . G 5 HOH A 98 3098 3098 HOH HOH . G 5 HOH A 99 3099 3099 HOH HOH . G 5 HOH A 100 3100 3100 HOH HOH . G 5 HOH A 101 3101 3101 HOH HOH . G 5 HOH A 102 3102 3102 HOH HOH . G 5 HOH A 103 3103 3103 HOH HOH . G 5 HOH A 104 3104 3104 HOH HOH . G 5 HOH A 105 3105 3105 HOH HOH . G 5 HOH A 106 3106 3106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . B 2 5.318 4.174 39.141 1 40.61 ? N1 EPE 1001 A 1 HETATM 2 C C2 EPE . . . B 2 4.507 4.899 40.137 1 40.9 ? C2 EPE 1001 A 1 HETATM 3 C C3 EPE . . . B 2 4.981 6.349 40.27 1 41.33 ? C3 EPE 1001 A 1 HETATM 4 N N4 EPE . . . B 2 5.283 7.001 39.001 1 41.71 ? N4 EPE 1001 A 1 HETATM 5 C C5 EPE . . . B 2 5.765 6.21 37.877 1 41.32 ? C5 EPE 1001 A 1 HETATM 6 C C6 EPE . . . B 2 5.157 4.812 37.824 1 40.77 ? C6 EPE 1001 A 1 HETATM 7 C C7 EPE . . . B 2 5.63 8.413 39.03 1 42.15 ? C7 EPE 1001 A 1 HETATM 8 C C8 EPE . . . B 2 4.718 9.282 38.164 1 42.58 ? C8 EPE 1001 A 1 HETATM 9 O O8 EPE . . . B 2 5.505 10.122 37.342 1 42.97 ? O8 EPE 1001 A 1 HETATM 10 C C9 EPE . . . B 2 4.893 2.763 39.083 1 40.08 ? C9 EPE 1001 A 1 HETATM 11 C C10 EPE . . . B 2 6.01 1.887 38.516 1 39.49 ? C10 EPE 1001 A 1 HETATM 12 S S EPE . . . B 2 6.001 0.175 39.111 1 39.15 ? S EPE 1001 A 1 HETATM 13 O O1S EPE . . . B 2 7.073 0.016 40.087 1 39.33 ? O1S EPE 1001 A 1 HETATM 14 O O2S EPE . . . B 2 6.219 -0.737 37.992 1 39.05 ? O2S EPE 1001 A 1 HETATM 15 O O3S EPE . . . B 2 4.723 -0.149 39.74 1 39.21 ? O3S EPE 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #