data_3HNH # _model_server_result.job_id 25wcf0nPcq8mBJZLXVK2RA _model_server_result.datetime_utc '2024-11-23 20:10:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":259}' # _entry.id 3HNH # _exptl.entry_id 3HNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 338.27 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,7R,9R)-4,5-dihydroxy-2,3,6,7,8,9-hexahydro-1H-pyrrolo[2,3-f]quinoline-2,7,9-tricarboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HNH _cell.length_a 73.792 _cell.length_b 115.347 _cell.length_c 67.062 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H14 N2 O8' _chem_comp.formula_weight 338.27 _chem_comp.id AHQ _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,7R,9R)-4,5-dihydroxy-2,3,6,7,8,9-hexahydro-1H-pyrrolo[2,3-f]quinoline-2,7,9-tricarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C5 AHQ sing 1 n n C5 C4 AHQ doub 2 n y C5 C6A AHQ sing 3 n y C4 O4 AHQ sing 4 n n C4 C3A AHQ sing 5 n y C3A C3 AHQ sing 6 n n C3A C1A AHQ doub 7 n y C3 C2 AHQ sing 8 n n C2 C2X AHQ sing 9 n n C2 N1 AHQ sing 10 n n C2X O2B AHQ sing 11 n n C2X O2A AHQ doub 12 n n N1 C1A AHQ sing 13 n n C1A C9A AHQ sing 14 n y C9A C6A AHQ doub 15 n y C9A C9 AHQ sing 16 n n C6A N6 AHQ sing 17 n n N6 C7 AHQ sing 18 n n C7 C7X AHQ sing 19 n n C7 C8 AHQ sing 20 n n C7X O7B AHQ sing 21 n n C7X O7A AHQ doub 22 n n C8 C9 AHQ sing 23 n n C9 C9X AHQ sing 24 n n C9X O9B AHQ doub 25 n n C9X O9A AHQ sing 26 n n O5 HO5 AHQ sing 27 n n O4 HO4 AHQ sing 28 n n C3 H3 AHQ sing 29 n n C3 H3A AHQ sing 30 n n C2 H2 AHQ sing 31 n n N1 HN1 AHQ sing 32 n n N6 HN6 AHQ sing 33 n n C7 H7 AHQ sing 34 n n C8 H8 AHQ sing 35 n n C8 H8A AHQ sing 36 n n C9 H9 AHQ sing 37 n n O2B HO2 AHQ sing 38 n n O7B HO7 AHQ sing 39 n n O9A HO9 AHQ sing 40 n n # _atom_sites.entry_id 3HNH _atom_sites.fract_transf_matrix[1][1] 0.013552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AHQ A 1 259 259 AHQ AHQ . C 3 HOH A 1 260 260 HOH HOH . C 3 HOH A 2 261 261 HOH HOH . C 3 HOH A 3 262 262 HOH HOH . C 3 HOH A 4 263 263 HOH HOH . C 3 HOH A 5 264 264 HOH HOH . C 3 HOH A 6 265 265 HOH HOH . C 3 HOH A 7 266 266 HOH HOH . C 3 HOH A 8 267 267 HOH HOH . C 3 HOH A 9 268 268 HOH HOH . C 3 HOH A 10 269 269 HOH HOH . C 3 HOH A 11 270 270 HOH HOH . C 3 HOH A 12 271 271 HOH HOH . C 3 HOH A 13 272 272 HOH HOH . C 3 HOH A 14 273 273 HOH HOH . C 3 HOH A 15 274 274 HOH HOH . C 3 HOH A 16 275 275 HOH HOH . C 3 HOH A 17 276 276 HOH HOH . C 3 HOH A 18 277 277 HOH HOH . C 3 HOH A 19 278 278 HOH HOH . C 3 HOH A 20 279 279 HOH HOH . C 3 HOH A 21 280 280 HOH HOH . C 3 HOH A 22 281 281 HOH HOH . C 3 HOH A 23 282 282 HOH HOH . C 3 HOH A 24 283 283 HOH HOH . C 3 HOH A 25 284 284 HOH HOH . C 3 HOH A 26 285 285 HOH HOH . C 3 HOH A 27 286 286 HOH HOH . C 3 HOH A 28 287 287 HOH HOH . C 3 HOH A 29 288 288 HOH HOH . C 3 HOH A 30 289 289 HOH HOH . C 3 HOH A 31 290 290 HOH HOH . C 3 HOH A 32 291 291 HOH HOH . C 3 HOH A 33 292 292 HOH HOH . C 3 HOH A 34 293 293 HOH HOH . C 3 HOH A 35 294 294 HOH HOH . C 3 HOH A 36 295 295 HOH HOH . C 3 HOH A 37 296 296 HOH HOH . C 3 HOH A 38 297 297 HOH HOH . C 3 HOH A 39 298 298 HOH HOH . C 3 HOH A 40 299 299 HOH HOH . C 3 HOH A 41 300 300 HOH HOH . C 3 HOH A 42 301 301 HOH HOH . C 3 HOH A 43 302 302 HOH HOH . C 3 HOH A 44 303 303 HOH HOH . C 3 HOH A 45 304 304 HOH HOH . C 3 HOH A 46 305 305 HOH HOH . C 3 HOH A 47 306 306 HOH HOH . C 3 HOH A 48 307 307 HOH HOH . C 3 HOH A 49 308 308 HOH HOH . C 3 HOH A 50 309 309 HOH HOH . C 3 HOH A 51 310 310 HOH HOH . C 3 HOH A 52 311 311 HOH HOH . C 3 HOH A 53 312 312 HOH HOH . C 3 HOH A 54 313 313 HOH HOH . C 3 HOH A 55 314 314 HOH HOH . C 3 HOH A 56 315 315 HOH HOH . C 3 HOH A 57 316 316 HOH HOH . C 3 HOH A 58 317 317 HOH HOH . C 3 HOH A 59 318 318 HOH HOH . C 3 HOH A 60 319 319 HOH HOH . C 3 HOH A 61 320 320 HOH HOH . C 3 HOH A 62 321 321 HOH HOH . C 3 HOH A 63 322 322 HOH HOH . C 3 HOH A 64 323 323 HOH HOH . C 3 HOH A 65 324 324 HOH HOH . C 3 HOH A 66 325 325 HOH HOH . C 3 HOH A 67 326 326 HOH HOH . C 3 HOH A 68 327 327 HOH HOH . C 3 HOH A 69 328 328 HOH HOH . C 3 HOH A 70 329 329 HOH HOH . C 3 HOH A 71 330 330 HOH HOH . C 3 HOH A 72 331 331 HOH HOH . C 3 HOH A 73 332 332 HOH HOH . C 3 HOH A 74 333 333 HOH HOH . C 3 HOH A 75 334 334 HOH HOH . C 3 HOH A 76 335 335 HOH HOH . C 3 HOH A 77 336 336 HOH HOH . C 3 HOH A 78 337 337 HOH HOH . C 3 HOH A 79 338 338 HOH HOH . C 3 HOH A 80 339 339 HOH HOH . C 3 HOH A 81 340 340 HOH HOH . C 3 HOH A 82 341 341 HOH HOH . C 3 HOH A 83 342 342 HOH HOH . C 3 HOH A 84 343 343 HOH HOH . C 3 HOH A 85 344 344 HOH HOH . C 3 HOH A 86 346 346 HOH HOH . C 3 HOH A 87 347 347 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O5 AHQ . . . B 2 -3.364 -40.233 -19.281 0.9 56.36 ? O5 AHQ 259 A 1 HETATM 2 C C5 AHQ . . . B 2 -4.055 -40.737 -18.408 0.9 54.89 ? C5 AHQ 259 A 1 HETATM 3 C C4 AHQ . . . B 2 -4.128 -42.096 -18.294 0.9 53.4 ? C4 AHQ 259 A 1 HETATM 4 O O4 AHQ . . . B 2 -3.48 -42.75 -19.091 0.9 53.95 ? O4 AHQ 259 A 1 HETATM 5 C C3A AHQ . . . B 2 -4.927 -42.661 -17.3 0.9 50.84 ? C3A AHQ 259 A 1 HETATM 6 C C3 AHQ . . . B 2 -5.162 -44.126 -16.991 0.9 48.8 ? C3 AHQ 259 A 1 HETATM 7 C C2 AHQ . . . B 2 -6.38 -44.024 -16.1 0.9 45.85 ? C2 AHQ 259 A 1 HETATM 8 C C2X AHQ . . . B 2 -6.322 -45.096 -15.016 0.9 40.42 ? C2X AHQ 259 A 1 HETATM 9 O O2B AHQ . . . B 2 -6.675 -44.826 -13.889 0.9 31.97 ? O2B AHQ 259 A 1 HETATM 10 O O2A AHQ . . . B 2 -5.94 -46.185 -15.384 0.9 43.59 ? O2A AHQ 259 A 1 HETATM 11 N N1 AHQ . . . B 2 -6.313 -42.662 -15.566 0.9 47.99 ? N1 AHQ 259 A 1 HETATM 12 C C1A AHQ . . . B 2 -5.656 -41.865 -16.409 0.9 50.72 ? C1A AHQ 259 A 1 HETATM 13 C C9A AHQ . . . B 2 -5.577 -40.468 -16.548 0.9 51.65 ? C9A AHQ 259 A 1 HETATM 14 C C6A AHQ . . . B 2 -4.762 -39.938 -17.544 0.9 53.87 ? C6A AHQ 259 A 1 HETATM 15 N N6 AHQ . . . B 2 -4.618 -38.592 -17.741 0.9 54.95 ? N6 AHQ 259 A 1 HETATM 16 C C7 AHQ . . . B 2 -5.289 -37.602 -16.908 0.9 57.69 ? C7 AHQ 259 A 1 HETATM 17 C C7X AHQ . . . B 2 -5.482 -36.31 -17.727 0.9 60.92 ? C7X AHQ 259 A 1 HETATM 18 O O7B AHQ . . . B 2 -4.794 -36.205 -18.753 0.9 63 ? O7B AHQ 259 A 1 HETATM 19 O O7A AHQ . . . B 2 -6.255 -35.451 -17.279 0.9 60.78 ? O7A AHQ 259 A 1 HETATM 20 C C8 AHQ . . . B 2 -6.595 -38.185 -16.403 0.9 55.53 ? C8 AHQ 259 A 1 HETATM 21 C C9 AHQ . . . B 2 -6.278 -39.447 -15.631 0.9 50.86 ? C9 AHQ 259 A 1 HETATM 22 C C9X AHQ . . . B 2 -7.495 -39.95 -14.863 0.9 49.46 ? C9X AHQ 259 A 1 HETATM 23 O O9B AHQ . . . B 2 -8.558 -39.377 -15.022 0.9 44.22 ? O9B AHQ 259 A 1 HETATM 24 O O9A AHQ . . . B 2 -7.288 -40.829 -14.035 0.9 47.03 ? O9A AHQ 259 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #