data_3HO5 # _model_server_result.job_id Ckb5CYREJAMgGg_oWteGYg _model_server_result.datetime_utc '2025-08-30 23:51:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ho5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":400}' # _entry.id 3HO5 # _exptl.entry_id 3HO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HO5 _cell.length_a 101.618 _cell.length_b 101.618 _cell.length_c 302.83 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D 1 1 B,C,E,F,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 216 1_555 A SG CYS 344 A CYS 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 26 A CYS 218 1_555 A SG CYS 351 A CYS 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 210 A CYS 402 1_555 A SG CYS 432 A CYS 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 243 A CYS 435 1_555 A SG CYS 260 A CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 A SG CYS 308 A CYS 500 1_555 A SG CYS 402 A CYS 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 A SG CYS 416 A CYS 608 1_555 A SG CYS 425 A CYS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 A SG CYS 420 A CYS 612 1_555 A SG CYS 431 A CYS 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 A SG CYS 433 A CYS 625 1_555 A SG CYS 442 A CYS 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 A SG CYS 447 A CYS 639 1_555 A SG CYS 457 A CYS 649 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf10 A SG CYS 451 A CYS 643 1_555 A SG CYS 463 A CYS 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 A SG CYS 465 A CYS 657 1_555 A SG CYS 474 A CYS 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf12 B SG CYS 24 B CYS 216 1_555 B SG CYS 344 B CYS 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf13 B SG CYS 26 B CYS 218 1_555 B SG CYS 351 B CYS 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf14 B SG CYS 210 B CYS 402 1_555 B SG CYS 432 B CYS 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf15 B SG CYS 243 B CYS 435 1_555 B SG CYS 260 B CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 B SG CYS 308 B CYS 500 1_555 B SG CYS 402 B CYS 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf17 B SG CYS 416 B CYS 608 1_555 B SG CYS 425 B CYS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf18 B SG CYS 420 B CYS 612 1_555 B SG CYS 431 B CYS 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf19 B SG CYS 433 B CYS 625 1_555 B SG CYS 442 B CYS 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf20 B SG CYS 447 B CYS 639 1_555 B SG CYS 457 B CYS 649 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf21 B SG CYS 451 B CYS 643 1_555 B SG CYS 463 B CYS 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf22 B SG CYS 465 B CYS 657 1_555 B SG CYS 474 B CYS 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OD1 ASP 191 A ASP 383 1_555 D ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc2 B OD2 ASP 191 B ASP 383 1_555 E ZN ZN . H ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc3 C OE1 GLU 61 H GLU 89 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 C OE2 GLU 61 H GLU 89 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc5 C OE1 GLU 62 H GLU 90 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc6 C OE2 GLU 62 H GLU 90 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc7 C OE2 GLU 62 H GLU 90 1_555 G CA CA . H CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc8 C OD1 ASP 67 H ASP 95 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 C OD2 ASP 67 H ASP 95 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc10 C O THR 97 H THR 125 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc11 C OE2 GLU 98 H GLU 126 1_555 F CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc12 C OE1 GLU 98 H GLU 126 1_555 G CA CA . H CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc13 C OE2 GLU 98 H GLU 126 1_555 G CA CA . H CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc14 C OD1 ASP 101 H ASP 129 1_555 G CA CA . H CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc15 C OD2 ASP 103 H ASP 131 1_555 G CA CA . H CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc16 C NE2 HIS 112 H HIS 140 1_555 E ZN ZN . H ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc17 C OD1 ASP 119 H ASP 147 1_555 E ZN ZN . H ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc18 C ND1 HIS 154 H HIS 182 1_555 E ZN ZN . H ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HO5 _atom_sites.fract_transf_matrix[1][1] 0.009841 _atom_sites.fract_transf_matrix[1][2] 0.005682 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN A 1 902 902 ZN ZN . E 3 ZN H 1 400 400 ZN ZN . F 4 CA H 1 401 401 CA CA . G 4 CA H 1 402 402 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.465 _atom_site.Cartn_y 35.592 _atom_site.Cartn_z 130.742 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 75.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 400 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 609 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #