data_3HOF # _model_server_result.job_id w07Y-pxVWQZ7Z3Ra4VN4PA _model_server_result.datetime_utc '2024-11-26 01:16:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":123}' # _entry.id 3HOF # _exptl.entry_id 3HOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.157 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CAFFEIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HOF _cell.length_a 67.669 _cell.length_b 67.988 _cell.length_c 89.135 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H8 O4' _chem_comp.formula_weight 180.157 _chem_comp.id DHC _chem_comp.mon_nstd_flag . _chem_comp.name 'CAFFEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3,4-DIHYDROXYCINNAMIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 DHC doub 83 n n C1 C2 DHC sing 84 n n C1 O2 DHC sing 85 n n C2 C3 DHC doub 86 e n C2 HC2 DHC sing 87 n n C3 C1' DHC sing 88 n n C3 HC3 DHC sing 89 n n C1' C2' DHC doub 90 n y C1' C6' DHC sing 91 n y C2' C3' DHC sing 92 n y C2' H2' DHC sing 93 n n C3' C4' DHC doub 94 n y C3' O3' DHC sing 95 n n C4' C5' DHC sing 96 n y C4' O4' DHC sing 97 n n C5' C6' DHC doub 98 n y C5' H5' DHC sing 99 n n C6' H6' DHC sing 100 n n O4' H4' DHC sing 101 n n O3' H3' DHC sing 102 n n O2 HO2 DHC sing 103 n n # _atom_sites.entry_id 3HOF _atom_sites.fract_transf_matrix[1][1] 0.014778 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 DHC C 1 123 1 DHC CAF . E 3 HOH A 1 123 2 HOH HOH . E 3 HOH A 2 124 5 HOH HOH . E 3 HOH A 3 125 7 HOH HOH . E 3 HOH A 4 126 126 HOH HOH . E 3 HOH A 5 127 127 HOH HOH . E 3 HOH A 6 128 9 HOH HOH . E 3 HOH A 7 129 10 HOH HOH . E 3 HOH A 8 130 12 HOH HOH . E 3 HOH A 9 131 131 HOH HOH . E 3 HOH A 10 132 15 HOH HOH . E 3 HOH A 11 133 19 HOH HOH . E 3 HOH A 12 134 21 HOH HOH . E 3 HOH A 13 135 22 HOH HOH . E 3 HOH A 14 136 136 HOH HOH . E 3 HOH A 15 137 25 HOH HOH . E 3 HOH A 16 138 138 HOH HOH . E 3 HOH A 17 140 32 HOH HOH . E 3 HOH A 18 141 39 HOH HOH . E 3 HOH A 19 142 42 HOH HOH . E 3 HOH A 20 143 43 HOH HOH . E 3 HOH A 21 144 144 HOH HOH . E 3 HOH A 22 145 145 HOH HOH . E 3 HOH A 23 146 146 HOH HOH . E 3 HOH A 24 147 46 HOH HOH . E 3 HOH A 25 148 49 HOH HOH . E 3 HOH A 26 149 52 HOH HOH . E 3 HOH A 27 150 53 HOH HOH . E 3 HOH A 28 151 54 HOH HOH . E 3 HOH A 29 152 55 HOH HOH . E 3 HOH A 30 153 58 HOH HOH . E 3 HOH A 31 154 59 HOH HOH . E 3 HOH A 32 155 155 HOH HOH . E 3 HOH A 33 156 64 HOH HOH . E 3 HOH A 34 157 65 HOH HOH . E 3 HOH A 35 158 71 HOH HOH . E 3 HOH A 36 159 77 HOH HOH . E 3 HOH A 37 160 79 HOH HOH . E 3 HOH A 38 161 84 HOH HOH . E 3 HOH A 39 162 87 HOH HOH . E 3 HOH A 40 163 163 HOH HOH . E 3 HOH A 41 164 90 HOH HOH . E 3 HOH A 42 165 91 HOH HOH . E 3 HOH A 43 166 166 HOH HOH . E 3 HOH A 44 167 167 HOH HOH . E 3 HOH A 45 168 93 HOH HOH . E 3 HOH A 46 169 96 HOH HOH . E 3 HOH A 47 170 100 HOH HOH . E 3 HOH A 48 171 102 HOH HOH . E 3 HOH A 49 172 104 HOH HOH . E 3 HOH A 50 173 106 HOH HOH . E 3 HOH A 51 174 115 HOH HOH . E 3 HOH A 52 175 118 HOH HOH . E 3 HOH A 53 176 176 HOH HOH . E 3 HOH A 54 177 119 HOH HOH . E 3 HOH A 55 179 179 HOH HOH . E 3 HOH A 56 180 180 HOH HOH . E 3 HOH A 57 182 182 HOH HOH . E 3 HOH A 58 185 185 HOH HOH . E 3 HOH A 59 187 187 HOH HOH . E 3 HOH A 60 198 198 HOH HOH . E 3 HOH A 61 199 199 HOH HOH . E 3 HOH A 62 201 201 HOH HOH . E 3 HOH A 63 203 203 HOH HOH . E 3 HOH A 64 205 205 HOH HOH . E 3 HOH A 65 208 208 HOH HOH . E 3 HOH A 66 217 217 HOH HOH . E 3 HOH A 67 218 218 HOH HOH . E 3 HOH A 68 220 220 HOH HOH . E 3 HOH A 69 223 223 HOH HOH . E 3 HOH A 70 233 233 HOH HOH . E 3 HOH A 71 236 236 HOH HOH . E 3 HOH A 72 240 240 HOH HOH . E 3 HOH A 73 250 250 HOH HOH . E 3 HOH A 74 252 252 HOH HOH . E 3 HOH A 75 256 256 HOH HOH . E 3 HOH A 76 257 257 HOH HOH . E 3 HOH A 77 258 258 HOH HOH . E 3 HOH A 78 261 261 HOH HOH . E 3 HOH A 79 262 262 HOH HOH . E 3 HOH A 80 264 264 HOH HOH . E 3 HOH A 81 267 267 HOH HOH . E 3 HOH A 82 269 269 HOH HOH . E 3 HOH A 83 270 270 HOH HOH . E 3 HOH A 84 271 271 HOH HOH . E 3 HOH A 85 273 273 HOH HOH . E 3 HOH A 86 274 274 HOH HOH . E 3 HOH A 87 275 275 HOH HOH . E 3 HOH A 88 278 278 HOH HOH . E 3 HOH A 89 279 279 HOH HOH . E 3 HOH A 90 280 280 HOH HOH . E 3 HOH A 91 283 283 HOH HOH . E 3 HOH A 92 285 285 HOH HOH . E 3 HOH A 93 286 286 HOH HOH . E 3 HOH A 94 291 291 HOH HOH . E 3 HOH A 95 293 293 HOH HOH . E 3 HOH A 96 300 300 HOH HOH . E 3 HOH A 97 302 302 HOH HOH . E 3 HOH A 98 315 315 HOH HOH . E 3 HOH A 99 320 320 HOH HOH . F 3 HOH B 1 123 4 HOH HOH . F 3 HOH B 2 124 8 HOH HOH . F 3 HOH B 3 125 125 HOH HOH . F 3 HOH B 4 126 13 HOH HOH . F 3 HOH B 5 127 14 HOH HOH . F 3 HOH B 6 128 17 HOH HOH . F 3 HOH B 7 129 20 HOH HOH . F 3 HOH B 8 130 24 HOH HOH . F 3 HOH B 9 131 26 HOH HOH . F 3 HOH B 10 132 132 HOH HOH . F 3 HOH B 11 133 133 HOH HOH . F 3 HOH B 12 134 134 HOH HOH . F 3 HOH B 13 135 29 HOH HOH . F 3 HOH B 14 136 30 HOH HOH . F 3 HOH B 15 137 137 HOH HOH . F 3 HOH B 16 138 33 HOH HOH . F 3 HOH B 17 139 35 HOH HOH . F 3 HOH B 18 140 140 HOH HOH . F 3 HOH B 19 141 36 HOH HOH . F 3 HOH B 20 142 142 HOH HOH . F 3 HOH B 21 143 37 HOH HOH . F 3 HOH B 22 144 40 HOH HOH . F 3 HOH B 23 145 41 HOH HOH . F 3 HOH B 24 146 45 HOH HOH . F 3 HOH B 25 147 147 HOH HOH . F 3 HOH B 26 148 148 HOH HOH . F 3 HOH B 27 149 149 HOH HOH . F 3 HOH B 28 150 150 HOH HOH . F 3 HOH B 29 151 51 HOH HOH . F 3 HOH B 30 152 57 HOH HOH . F 3 HOH B 31 153 62 HOH HOH . F 3 HOH B 32 154 63 HOH HOH . F 3 HOH B 33 155 68 HOH HOH . F 3 HOH B 34 156 72 HOH HOH . F 3 HOH B 35 157 74 HOH HOH . F 3 HOH B 36 158 76 HOH HOH . F 3 HOH B 37 159 78 HOH HOH . F 3 HOH B 38 160 80 HOH HOH . F 3 HOH B 39 161 81 HOH HOH . F 3 HOH B 40 162 162 HOH HOH . F 3 HOH B 41 163 83 HOH HOH . F 3 HOH B 42 164 85 HOH HOH . F 3 HOH B 43 165 88 HOH HOH . F 3 HOH B 44 166 89 HOH HOH . F 3 HOH B 45 167 92 HOH HOH . F 3 HOH B 46 168 99 HOH HOH . F 3 HOH B 47 169 169 HOH HOH . F 3 HOH B 48 170 101 HOH HOH . F 3 HOH B 49 171 171 HOH HOH . F 3 HOH B 50 172 172 HOH HOH . F 3 HOH B 51 173 103 HOH HOH . F 3 HOH B 52 174 107 HOH HOH . F 3 HOH B 53 175 112 HOH HOH . F 3 HOH B 54 176 113 HOH HOH . F 3 HOH B 55 177 116 HOH HOH . F 3 HOH B 56 178 117 HOH HOH . F 3 HOH B 57 179 121 HOH HOH . F 3 HOH B 58 180 122 HOH HOH . F 3 HOH B 59 181 181 HOH HOH . F 3 HOH B 60 183 183 HOH HOH . F 3 HOH B 61 184 184 HOH HOH . F 3 HOH B 62 189 189 HOH HOH . F 3 HOH B 63 190 190 HOH HOH . F 3 HOH B 64 191 191 HOH HOH . F 3 HOH B 65 193 193 HOH HOH . F 3 HOH B 66 196 196 HOH HOH . F 3 HOH B 67 202 202 HOH HOH . F 3 HOH B 68 214 214 HOH HOH . F 3 HOH B 69 215 215 HOH HOH . F 3 HOH B 70 219 219 HOH HOH . F 3 HOH B 71 222 222 HOH HOH . F 3 HOH B 72 224 224 HOH HOH . F 3 HOH B 73 228 228 HOH HOH . F 3 HOH B 74 230 230 HOH HOH . F 3 HOH B 75 237 237 HOH HOH . F 3 HOH B 76 244 244 HOH HOH . F 3 HOH B 77 253 253 HOH HOH . F 3 HOH B 78 263 263 HOH HOH . F 3 HOH B 79 272 272 HOH HOH . F 3 HOH B 80 276 276 HOH HOH . F 3 HOH B 81 277 277 HOH HOH . F 3 HOH B 82 282 282 HOH HOH . F 3 HOH B 83 284 284 HOH HOH . F 3 HOH B 84 292 292 HOH HOH . F 3 HOH B 85 294 294 HOH HOH . F 3 HOH B 86 297 297 HOH HOH . F 3 HOH B 87 299 299 HOH HOH . F 3 HOH B 88 301 301 HOH HOH . F 3 HOH B 89 306 306 HOH HOH . F 3 HOH B 90 307 307 HOH HOH . F 3 HOH B 91 310 310 HOH HOH . F 3 HOH B 92 316 316 HOH HOH . G 3 HOH C 1 124 124 HOH HOH . G 3 HOH C 2 125 6 HOH HOH . G 3 HOH C 3 126 11 HOH HOH . G 3 HOH C 4 127 16 HOH HOH . G 3 HOH C 5 128 128 HOH HOH . G 3 HOH C 6 129 129 HOH HOH . G 3 HOH C 7 130 130 HOH HOH . G 3 HOH C 8 131 18 HOH HOH . G 3 HOH C 9 132 23 HOH HOH . G 3 HOH C 10 133 27 HOH HOH . G 3 HOH C 11 134 28 HOH HOH . G 3 HOH C 12 135 31 HOH HOH . G 3 HOH C 13 136 34 HOH HOH . G 3 HOH C 14 137 44 HOH HOH . G 3 HOH C 15 138 47 HOH HOH . G 3 HOH C 16 139 139 HOH HOH . G 3 HOH C 17 140 50 HOH HOH . G 3 HOH C 18 141 141 HOH HOH . G 3 HOH C 19 142 56 HOH HOH . G 3 HOH C 20 143 143 HOH HOH . G 3 HOH C 21 144 60 HOH HOH . G 3 HOH C 22 145 61 HOH HOH . G 3 HOH C 23 146 66 HOH HOH . G 3 HOH C 24 147 67 HOH HOH . G 3 HOH C 25 148 69 HOH HOH . G 3 HOH C 26 149 70 HOH HOH . G 3 HOH C 27 150 73 HOH HOH . G 3 HOH C 28 151 75 HOH HOH . G 3 HOH C 29 152 152 HOH HOH . G 3 HOH C 30 153 153 HOH HOH . G 3 HOH C 31 154 82 HOH HOH . G 3 HOH C 32 155 86 HOH HOH . G 3 HOH C 33 156 94 HOH HOH . G 3 HOH C 34 157 157 HOH HOH . G 3 HOH C 35 158 95 HOH HOH . G 3 HOH C 36 159 97 HOH HOH . G 3 HOH C 37 160 160 HOH HOH . G 3 HOH C 38 161 98 HOH HOH . G 3 HOH C 39 162 105 HOH HOH . G 3 HOH C 40 163 108 HOH HOH . G 3 HOH C 41 164 164 HOH HOH . G 3 HOH C 42 165 165 HOH HOH . G 3 HOH C 43 166 109 HOH HOH . G 3 HOH C 44 167 110 HOH HOH . G 3 HOH C 45 168 168 HOH HOH . G 3 HOH C 46 169 114 HOH HOH . G 3 HOH C 47 170 170 HOH HOH . G 3 HOH C 48 171 120 HOH HOH . G 3 HOH C 49 172 48 HOH HOH . G 3 HOH C 50 175 175 HOH HOH . G 3 HOH C 51 188 188 HOH HOH . G 3 HOH C 52 192 192 HOH HOH . G 3 HOH C 53 195 195 HOH HOH . G 3 HOH C 54 197 197 HOH HOH . G 3 HOH C 55 200 200 HOH HOH . G 3 HOH C 56 209 209 HOH HOH . G 3 HOH C 57 216 216 HOH HOH . G 3 HOH C 58 221 221 HOH HOH . G 3 HOH C 59 232 232 HOH HOH . G 3 HOH C 60 238 238 HOH HOH . G 3 HOH C 61 239 239 HOH HOH . G 3 HOH C 62 241 241 HOH HOH . G 3 HOH C 63 242 242 HOH HOH . G 3 HOH C 64 243 243 HOH HOH . G 3 HOH C 65 247 247 HOH HOH . G 3 HOH C 66 265 265 HOH HOH . G 3 HOH C 67 268 268 HOH HOH . G 3 HOH C 68 281 281 HOH HOH . G 3 HOH C 69 287 287 HOH HOH . G 3 HOH C 70 288 288 HOH HOH . G 3 HOH C 71 295 295 HOH HOH . G 3 HOH C 72 296 296 HOH HOH . G 3 HOH C 73 303 303 HOH HOH . G 3 HOH C 74 304 304 HOH HOH . G 3 HOH C 75 305 305 HOH HOH . G 3 HOH C 76 308 308 HOH HOH . G 3 HOH C 77 309 309 HOH HOH . G 3 HOH C 78 311 311 HOH HOH . G 3 HOH C 79 312 312 HOH HOH . G 3 HOH C 80 317 317 HOH HOH . G 3 HOH C 81 318 318 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHC . . . D 2 -17.739 2.47 -40.391 1 47.64 ? C1 DHC 123 C 1 HETATM 2 O O1 DHC . . . D 2 -17.884 1.505 -39.499 1 52.92 ? O1 DHC 123 C 1 HETATM 3 C C2 DHC . . . D 2 -17.757 2.16 -41.806 1 46.49 ? C2 DHC 123 C 1 HETATM 4 C C3 DHC . . . D 2 -18.963 2.349 -42.312 1 45.27 ? C3 DHC 123 C 1 HETATM 5 C C1' DHC . . . D 2 -19.23 2.103 -43.728 1 43.33 ? C1' DHC 123 C 1 HETATM 6 C C2' DHC . . . D 2 -18.202 2.172 -44.658 1 41.04 ? C2' DHC 123 C 1 HETATM 7 C C3' DHC . . . D 2 -18.516 1.934 -45.995 1 40.19 ? C3' DHC 123 C 1 HETATM 8 C C4' DHC . . . D 2 -19.916 1.604 -46.397 1 42.58 ? C4' DHC 123 C 1 HETATM 9 C C5' DHC . . . D 2 -20.883 1.548 -45.415 1 43.75 ? C5' DHC 123 C 1 HETATM 10 C C6' DHC . . . D 2 -20.536 1.802 -44.095 1 42.71 ? C6' DHC 123 C 1 HETATM 11 O O4' DHC . . . D 2 -20.251 1.347 -47.703 1 44.15 ? O4' DHC 123 C 1 HETATM 12 O O3' DHC . . . D 2 -17.543 2 -46.924 1 36.25 ? O3' DHC 123 C 1 HETATM 13 O O2 DHC . . . D 2 -17.628 3.617 -40.018 1 49.97 ? O2 DHC 123 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #