data_3HOH # _model_server_result.job_id YhGTEkLz_cqA4sQzyU5NQQ _model_server_result.datetime_utc '2024-10-14 20:22:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hoh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":106}' # _entry.id 3HOH # _exptl.entry_id 3HOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HOH _cell.length_a 59.36 _cell.length_b 60.55 _cell.length_c 100.82 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,L 1 1 B,F,M 2 1 C,G,H,I,N 3 1 D,J,K,O 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 B SG CYS 2 B CYS 2 1_555 B SG CYS 10 B CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 6 B CYS 6 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 C SG CYS 2 C CYS 2 1_555 C SG CYS 10 C CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 C SG CYS 6 C CYS 6 1_555 C SG CYS 103 C CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 D SG CYS 2 D CYS 2 1_555 D SG CYS 10 D CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf8 D SG CYS 6 D CYS 6 1_555 D SG CYS 103 D CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc1 C O TYR 45 C TYR 45 4_566 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 C O GLY 47 C GLY 47 3_646 G CA CA . C CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc3 C OD1 ASP 49 C ASP 49 3_646 G CA CA . C CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc4 G CA CA . C CA 105 1_555 N O HOH . C HOH 379 3_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc5 G CA CA . C CA 105 1_555 D O TYR 45 D TYR 45 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc6 G CA CA . C CA 105 1_555 O O HOH . D HOH 351 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc7 G CA CA . C CA 105 1_555 O O HOH . D HOH 434 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc8 N O HOH . C HOH 406 4_566 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc9 N O HOH . C HOH 420 4_566 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc10 N O HOH . C HOH 487 4_566 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc11 D O GLY 47 D GLY 47 1_555 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc12 D OD1 ASP 49 D ASP 49 1_555 J CA CA . D CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HOH _atom_sites.fract_transf_matrix[1][1] 0.016846 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 2GP A 1 107 107 2GP 2GP . F 2 2GP B 1 108 108 2GP 2GP . G 3 CA C 1 105 105 CA CA . H 2 2GP C 1 109 109 2GP 2GP . I 2 2GP C 1 110 110 2GP 2GP . J 3 CA D 1 106 106 CA CA . K 2 2GP D 1 111 111 2GP 2GP . L 4 HOH A 1 303 3 HOH HOH . L 4 HOH A 2 307 7 HOH HOH . L 4 HOH A 3 316 16 HOH HOH . L 4 HOH A 4 319 19 HOH HOH . L 4 HOH A 5 324 24 HOH HOH . L 4 HOH A 6 327 27 HOH HOH . L 4 HOH A 7 331 31 HOH HOH . L 4 HOH A 8 332 32 HOH HOH . L 4 HOH A 9 349 49 HOH HOH . L 4 HOH A 10 362 62 HOH HOH . L 4 HOH A 11 364 64 HOH HOH . L 4 HOH A 12 366 66 HOH HOH . L 4 HOH A 13 369 69 HOH HOH . L 4 HOH A 14 382 82 HOH HOH . L 4 HOH A 15 386 86 HOH HOH . L 4 HOH A 16 391 91 HOH HOH . L 4 HOH A 17 393 93 HOH HOH . L 4 HOH A 18 394 94 HOH HOH . L 4 HOH A 19 404 104 HOH HOH . L 4 HOH A 20 410 110 HOH HOH . L 4 HOH A 21 414 114 HOH HOH . L 4 HOH A 22 421 121 HOH HOH . L 4 HOH A 23 430 130 HOH HOH . L 4 HOH A 24 439 139 HOH HOH . L 4 HOH A 25 447 147 HOH HOH . L 4 HOH A 26 454 154 HOH HOH . L 4 HOH A 27 459 159 HOH HOH . L 4 HOH A 28 471 171 HOH HOH . L 4 HOH A 29 476 176 HOH HOH . L 4 HOH A 30 479 179 HOH HOH . L 4 HOH A 31 481 181 HOH HOH . L 4 HOH A 32 494 194 HOH HOH . L 4 HOH A 33 500 200 HOH HOH . L 4 HOH A 34 502 202 HOH HOH . L 4 HOH A 35 503 203 HOH HOH . L 4 HOH A 36 504 204 HOH HOH . L 4 HOH A 37 511 211 HOH HOH . L 4 HOH A 38 515 215 HOH HOH . L 4 HOH A 39 516 216 HOH HOH . L 4 HOH A 40 517 217 HOH HOH . L 4 HOH A 41 522 222 HOH HOH . L 4 HOH A 42 527 227 HOH HOH . M 4 HOH B 1 301 1 HOH HOH . M 4 HOH B 2 302 2 HOH HOH . M 4 HOH B 3 305 5 HOH HOH . M 4 HOH B 4 306 6 HOH HOH . M 4 HOH B 5 308 8 HOH HOH . M 4 HOH B 6 310 10 HOH HOH . M 4 HOH B 7 317 17 HOH HOH . M 4 HOH B 8 339 39 HOH HOH . M 4 HOH B 9 341 41 HOH HOH . M 4 HOH B 10 347 47 HOH HOH . M 4 HOH B 11 348 48 HOH HOH . M 4 HOH B 12 353 53 HOH HOH . M 4 HOH B 13 354 54 HOH HOH . M 4 HOH B 14 355 55 HOH HOH . M 4 HOH B 15 363 63 HOH HOH . M 4 HOH B 16 365 65 HOH HOH . M 4 HOH B 17 367 67 HOH HOH . M 4 HOH B 18 371 71 HOH HOH . M 4 HOH B 19 372 72 HOH HOH . M 4 HOH B 20 375 75 HOH HOH . M 4 HOH B 21 377 77 HOH HOH . M 4 HOH B 22 378 78 HOH HOH . M 4 HOH B 23 380 80 HOH HOH . M 4 HOH B 24 385 85 HOH HOH . M 4 HOH B 25 390 90 HOH HOH . M 4 HOH B 26 392 92 HOH HOH . M 4 HOH B 27 397 97 HOH HOH . M 4 HOH B 28 402 102 HOH HOH . M 4 HOH B 29 405 105 HOH HOH . M 4 HOH B 30 411 111 HOH HOH . M 4 HOH B 31 413 113 HOH HOH . M 4 HOH B 32 418 118 HOH HOH . M 4 HOH B 33 425 125 HOH HOH . M 4 HOH B 34 428 128 HOH HOH . M 4 HOH B 35 433 133 HOH HOH . M 4 HOH B 36 441 141 HOH HOH . M 4 HOH B 37 448 148 HOH HOH . M 4 HOH B 38 452 152 HOH HOH . M 4 HOH B 39 456 156 HOH HOH . M 4 HOH B 40 461 161 HOH HOH . M 4 HOH B 41 467 167 HOH HOH . M 4 HOH B 42 468 168 HOH HOH . M 4 HOH B 43 470 170 HOH HOH . M 4 HOH B 44 478 178 HOH HOH . M 4 HOH B 45 480 180 HOH HOH . M 4 HOH B 46 482 182 HOH HOH . M 4 HOH B 47 484 184 HOH HOH . M 4 HOH B 48 485 185 HOH HOH . M 4 HOH B 49 486 186 HOH HOH . M 4 HOH B 50 496 196 HOH HOH . M 4 HOH B 51 505 205 HOH HOH . M 4 HOH B 52 506 206 HOH HOH . M 4 HOH B 53 507 207 HOH HOH . M 4 HOH B 54 509 209 HOH HOH . M 4 HOH B 55 520 220 HOH HOH . M 4 HOH B 56 521 221 HOH HOH . M 4 HOH B 57 524 224 HOH HOH . M 4 HOH B 58 526 226 HOH HOH . N 4 HOH C 1 311 11 HOH HOH . N 4 HOH C 2 313 13 HOH HOH . N 4 HOH C 3 314 14 HOH HOH . N 4 HOH C 4 315 15 HOH HOH . N 4 HOH C 5 320 20 HOH HOH . N 4 HOH C 6 322 22 HOH HOH . N 4 HOH C 7 323 23 HOH HOH . N 4 HOH C 8 325 25 HOH HOH . N 4 HOH C 9 328 28 HOH HOH . N 4 HOH C 10 330 30 HOH HOH . N 4 HOH C 11 333 33 HOH HOH . N 4 HOH C 12 334 34 HOH HOH . N 4 HOH C 13 335 35 HOH HOH . N 4 HOH C 14 336 36 HOH HOH . N 4 HOH C 15 342 42 HOH HOH . N 4 HOH C 16 345 45 HOH HOH . N 4 HOH C 17 350 50 HOH HOH . N 4 HOH C 18 352 52 HOH HOH . N 4 HOH C 19 356 56 HOH HOH . N 4 HOH C 20 357 57 HOH HOH . N 4 HOH C 21 360 60 HOH HOH . N 4 HOH C 22 368 68 HOH HOH . N 4 HOH C 23 376 76 HOH HOH . N 4 HOH C 24 379 79 HOH HOH . N 4 HOH C 25 383 83 HOH HOH . N 4 HOH C 26 384 84 HOH HOH . N 4 HOH C 27 388 88 HOH HOH . N 4 HOH C 28 396 96 HOH HOH . N 4 HOH C 29 398 98 HOH HOH . N 4 HOH C 30 399 99 HOH HOH . N 4 HOH C 31 401 101 HOH HOH . N 4 HOH C 32 403 103 HOH HOH . N 4 HOH C 33 406 106 HOH HOH . N 4 HOH C 34 408 108 HOH HOH . N 4 HOH C 35 409 109 HOH HOH . N 4 HOH C 36 412 112 HOH HOH . N 4 HOH C 37 416 116 HOH HOH . N 4 HOH C 38 420 120 HOH HOH . N 4 HOH C 39 423 123 HOH HOH . N 4 HOH C 40 424 124 HOH HOH . N 4 HOH C 41 426 126 HOH HOH . N 4 HOH C 42 427 127 HOH HOH . N 4 HOH C 43 435 135 HOH HOH . N 4 HOH C 44 436 136 HOH HOH . N 4 HOH C 45 438 138 HOH HOH . N 4 HOH C 46 440 140 HOH HOH . N 4 HOH C 47 444 144 HOH HOH . N 4 HOH C 48 446 146 HOH HOH . N 4 HOH C 49 449 149 HOH HOH . N 4 HOH C 50 450 150 HOH HOH . N 4 HOH C 51 451 151 HOH HOH . N 4 HOH C 52 455 155 HOH HOH . N 4 HOH C 53 458 158 HOH HOH . N 4 HOH C 54 460 160 HOH HOH . N 4 HOH C 55 465 165 HOH HOH . N 4 HOH C 56 466 166 HOH HOH . N 4 HOH C 57 469 169 HOH HOH . N 4 HOH C 58 472 172 HOH HOH . N 4 HOH C 59 475 175 HOH HOH . N 4 HOH C 60 477 177 HOH HOH . N 4 HOH C 61 487 187 HOH HOH . N 4 HOH C 62 489 189 HOH HOH . N 4 HOH C 63 492 192 HOH HOH . N 4 HOH C 64 495 195 HOH HOH . N 4 HOH C 65 499 199 HOH HOH . N 4 HOH C 66 501 201 HOH HOH . N 4 HOH C 67 508 208 HOH HOH . N 4 HOH C 68 512 212 HOH HOH . N 4 HOH C 69 513 213 HOH HOH . N 4 HOH C 70 518 218 HOH HOH . N 4 HOH C 71 523 223 HOH HOH . N 4 HOH C 72 525 225 HOH HOH . N 4 HOH C 73 530 230 HOH HOH . O 4 HOH D 1 304 4 HOH HOH . O 4 HOH D 2 309 9 HOH HOH . O 4 HOH D 3 312 12 HOH HOH . O 4 HOH D 4 318 18 HOH HOH . O 4 HOH D 5 321 21 HOH HOH . O 4 HOH D 6 326 26 HOH HOH . O 4 HOH D 7 329 29 HOH HOH . O 4 HOH D 8 337 37 HOH HOH . O 4 HOH D 9 338 38 HOH HOH . O 4 HOH D 10 340 40 HOH HOH . O 4 HOH D 11 343 43 HOH HOH . O 4 HOH D 12 344 44 HOH HOH . O 4 HOH D 13 346 46 HOH HOH . O 4 HOH D 14 351 51 HOH HOH . O 4 HOH D 15 358 58 HOH HOH . O 4 HOH D 16 359 59 HOH HOH . O 4 HOH D 17 361 61 HOH HOH . O 4 HOH D 18 370 70 HOH HOH . O 4 HOH D 19 373 73 HOH HOH . O 4 HOH D 20 374 74 HOH HOH . O 4 HOH D 21 381 81 HOH HOH . O 4 HOH D 22 387 87 HOH HOH . O 4 HOH D 23 389 89 HOH HOH . O 4 HOH D 24 395 95 HOH HOH . O 4 HOH D 25 400 100 HOH HOH . O 4 HOH D 26 407 107 HOH HOH . O 4 HOH D 27 415 115 HOH HOH . O 4 HOH D 28 417 117 HOH HOH . O 4 HOH D 29 419 119 HOH HOH . O 4 HOH D 30 422 122 HOH HOH . O 4 HOH D 31 429 129 HOH HOH . O 4 HOH D 32 431 131 HOH HOH . O 4 HOH D 33 432 132 HOH HOH . O 4 HOH D 34 434 134 HOH HOH . O 4 HOH D 35 437 137 HOH HOH . O 4 HOH D 36 442 142 HOH HOH . O 4 HOH D 37 443 143 HOH HOH . O 4 HOH D 38 445 145 HOH HOH . O 4 HOH D 39 453 153 HOH HOH . O 4 HOH D 40 457 157 HOH HOH . O 4 HOH D 41 462 162 HOH HOH . O 4 HOH D 42 463 163 HOH HOH . O 4 HOH D 43 464 164 HOH HOH . O 4 HOH D 44 473 173 HOH HOH . O 4 HOH D 45 474 174 HOH HOH . O 4 HOH D 46 483 183 HOH HOH . O 4 HOH D 47 488 188 HOH HOH . O 4 HOH D 48 490 190 HOH HOH . O 4 HOH D 49 491 191 HOH HOH . O 4 HOH D 50 493 193 HOH HOH . O 4 HOH D 51 497 197 HOH HOH . O 4 HOH D 52 498 198 HOH HOH . O 4 HOH D 53 510 210 HOH HOH . O 4 HOH D 54 514 214 HOH HOH . O 4 HOH D 55 519 219 HOH HOH . O 4 HOH D 56 528 228 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 53.069 _atom_site.Cartn_y 45.205 _atom_site.Cartn_z 28.264 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 106 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 674 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #