data_3HOI # _model_server_result.job_id tEseCqo3HmQ9JXV0-BwAyA _model_server_result.datetime_utc '2024-11-13 03:02:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hoi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3HOI # _exptl.entry_id 3HOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HOI _cell.length_a 48.873 _cell.length_b 48.873 _cell.length_c 295.194 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -49.199 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 12 A ASP 30 1_555 A N MSE 13 A MSE 31 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C ASP 12 A ASP 30 1_555 A N MSE 13 A MSE 31 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C MSE 13 A MSE 31 1_555 A N ASN 14 A ASN 32 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.339 ? covale ? covale4 A C MSE 13 A MSE 31 1_555 A N ASN 14 A ASN 32 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.304 ? covale ? covale5 A C LEU 19 A LEU 37 1_555 A N MSE 20 A MSE 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale6 A C MSE 20 A MSE 38 1_555 A N LYS 21 A LYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale7 A C ALA 65 A ALA 83 1_555 A N MSE 66 A MSE 84 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C ALA 65 A ALA 83 1_555 A N MSE 66 A MSE 84 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C MSE 66 A MSE 84 1_555 A N ASN 67 A ASN 85 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 A C MSE 66 A MSE 84 1_555 A N ASN 67 A ASN 85 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale11 A C LEU 136 A LEU 154 1_555 A N MSE 137 A MSE 155 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale12 A C LEU 136 A LEU 154 1_555 A N MSE 137 A MSE 155 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.336 ? covale ? covale13 A C MSE 137 A MSE 155 1_555 A N GLY 138 A GLY 156 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale14 A C MSE 137 A MSE 155 1_555 A N GLY 138 A GLY 156 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale15 A C ALA 139 A ALA 157 1_555 A N MSE 140 A MSE 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 A C MSE 140 A MSE 158 1_555 A N ASP 141 A ASP 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale17 A C SER 165 A SER 183 1_555 A N MSE 166 A MSE 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale18 A C MSE 166 A MSE 184 1_555 A N ASP 167 A ASP 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 A C GLN 181 A GLN 199 1_555 A N MSE 182 A MSE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale20 A C MSE 182 A MSE 200 1_555 A N PRO 183 A PRO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale21 A C PRO 183 A PRO 201 1_555 A N MSE 184 A MSE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale22 A C MSE 184 A MSE 202 1_555 A N MSE 185 A MSE 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.321 ? covale ? covale23 A C MSE 184 A MSE 202 1_555 A N MSE 185 A MSE 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.32 ? covale ? covale24 A C MSE 185 A MSE 203 1_555 A N ASN 186 A ASN 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale25 A C MSE 185 A MSE 203 1_555 A N ASN 186 A ASN 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 377 n n S O2 SO4 doub 378 n n S O3 SO4 sing 379 n n S O4 SO4 sing 380 n n # _atom_sites.entry_id 3HOI _atom_sites.fract_transf_matrix[1][1] 0.020461 _atom_sites.fract_transf_matrix[1][2] 0.011813 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 300 300 FMN FMN . C 3 UNL A 1 1 1 UNL UNL . D 4 SO4 A 1 2 2 SO4 SO4 . E 4 SO4 A 1 3 3 SO4 SO4 . F 5 FLC A 1 4 4 FLC FLC . G 6 PEG A 1 5 5 PEG PEG . H 7 HOH A 1 6 6 HOH HOH . H 7 HOH A 2 7 7 HOH HOH . H 7 HOH A 3 8 8 HOH HOH . H 7 HOH A 4 9 9 HOH HOH . H 7 HOH A 5 10 10 HOH HOH . H 7 HOH A 6 11 11 HOH HOH . H 7 HOH A 7 12 12 HOH HOH . H 7 HOH A 8 13 13 HOH HOH . H 7 HOH A 9 14 14 HOH HOH . H 7 HOH A 10 15 15 HOH HOH . H 7 HOH A 11 16 16 HOH HOH . H 7 HOH A 12 17 17 HOH HOH . H 7 HOH A 13 18 18 HOH HOH . H 7 HOH A 14 19 19 HOH HOH . H 7 HOH A 15 212 212 HOH HOH . H 7 HOH A 16 213 20 HOH HOH . H 7 HOH A 17 214 21 HOH HOH . H 7 HOH A 18 215 22 HOH HOH . H 7 HOH A 19 216 23 HOH HOH . H 7 HOH A 20 217 24 HOH HOH . H 7 HOH A 21 218 25 HOH HOH . H 7 HOH A 22 219 26 HOH HOH . H 7 HOH A 23 220 27 HOH HOH . H 7 HOH A 24 221 28 HOH HOH . H 7 HOH A 25 222 29 HOH HOH . H 7 HOH A 26 223 30 HOH HOH . H 7 HOH A 27 224 31 HOH HOH . H 7 HOH A 28 225 32 HOH HOH . H 7 HOH A 29 226 33 HOH HOH . H 7 HOH A 30 227 34 HOH HOH . H 7 HOH A 31 228 35 HOH HOH . H 7 HOH A 32 229 36 HOH HOH . H 7 HOH A 33 230 37 HOH HOH . H 7 HOH A 34 231 38 HOH HOH . H 7 HOH A 35 232 39 HOH HOH . H 7 HOH A 36 233 40 HOH HOH . H 7 HOH A 37 234 41 HOH HOH . H 7 HOH A 38 235 42 HOH HOH . H 7 HOH A 39 236 43 HOH HOH . H 7 HOH A 40 237 44 HOH HOH . H 7 HOH A 41 238 45 HOH HOH . H 7 HOH A 42 239 46 HOH HOH . H 7 HOH A 43 240 47 HOH HOH . H 7 HOH A 44 241 48 HOH HOH . H 7 HOH A 45 242 49 HOH HOH . H 7 HOH A 46 243 50 HOH HOH . H 7 HOH A 47 244 51 HOH HOH . H 7 HOH A 48 245 52 HOH HOH . H 7 HOH A 49 246 53 HOH HOH . H 7 HOH A 50 247 54 HOH HOH . H 7 HOH A 51 248 55 HOH HOH . H 7 HOH A 52 249 56 HOH HOH . H 7 HOH A 53 250 57 HOH HOH . H 7 HOH A 54 251 58 HOH HOH . H 7 HOH A 55 252 59 HOH HOH . H 7 HOH A 56 253 60 HOH HOH . H 7 HOH A 57 254 61 HOH HOH . H 7 HOH A 58 255 62 HOH HOH . H 7 HOH A 59 256 63 HOH HOH . H 7 HOH A 60 257 64 HOH HOH . H 7 HOH A 61 258 65 HOH HOH . H 7 HOH A 62 259 66 HOH HOH . H 7 HOH A 63 260 67 HOH HOH . H 7 HOH A 64 261 68 HOH HOH . H 7 HOH A 65 262 69 HOH HOH . H 7 HOH A 66 263 70 HOH HOH . H 7 HOH A 67 264 71 HOH HOH . H 7 HOH A 68 265 72 HOH HOH . H 7 HOH A 69 266 73 HOH HOH . H 7 HOH A 70 267 74 HOH HOH . H 7 HOH A 71 268 75 HOH HOH . H 7 HOH A 72 269 76 HOH HOH . H 7 HOH A 73 270 77 HOH HOH . H 7 HOH A 74 271 78 HOH HOH . H 7 HOH A 75 272 79 HOH HOH . H 7 HOH A 76 273 80 HOH HOH . H 7 HOH A 77 274 81 HOH HOH . H 7 HOH A 78 275 82 HOH HOH . H 7 HOH A 79 276 83 HOH HOH . H 7 HOH A 80 277 84 HOH HOH . H 7 HOH A 81 278 85 HOH HOH . H 7 HOH A 82 279 86 HOH HOH . H 7 HOH A 83 280 87 HOH HOH . H 7 HOH A 84 281 88 HOH HOH . H 7 HOH A 85 282 89 HOH HOH . H 7 HOH A 86 283 90 HOH HOH . H 7 HOH A 87 284 91 HOH HOH . H 7 HOH A 88 285 92 HOH HOH . H 7 HOH A 89 286 93 HOH HOH . H 7 HOH A 90 287 94 HOH HOH . H 7 HOH A 91 288 95 HOH HOH . H 7 HOH A 92 289 96 HOH HOH . H 7 HOH A 93 290 97 HOH HOH . H 7 HOH A 94 291 98 HOH HOH . H 7 HOH A 95 292 99 HOH HOH . H 7 HOH A 96 293 100 HOH HOH . H 7 HOH A 97 294 101 HOH HOH . H 7 HOH A 98 295 102 HOH HOH . H 7 HOH A 99 296 103 HOH HOH . H 7 HOH A 100 297 104 HOH HOH . H 7 HOH A 101 298 105 HOH HOH . H 7 HOH A 102 299 106 HOH HOH . H 7 HOH A 103 301 107 HOH HOH . H 7 HOH A 104 302 108 HOH HOH . H 7 HOH A 105 303 109 HOH HOH . H 7 HOH A 106 304 110 HOH HOH . H 7 HOH A 107 305 111 HOH HOH . H 7 HOH A 108 306 112 HOH HOH . H 7 HOH A 109 307 113 HOH HOH . H 7 HOH A 110 308 114 HOH HOH . H 7 HOH A 111 309 115 HOH HOH . H 7 HOH A 112 310 116 HOH HOH . H 7 HOH A 113 311 117 HOH HOH . H 7 HOH A 114 312 118 HOH HOH . H 7 HOH A 115 313 119 HOH HOH . H 7 HOH A 116 314 120 HOH HOH . H 7 HOH A 117 315 121 HOH HOH . H 7 HOH A 118 316 122 HOH HOH . H 7 HOH A 119 317 123 HOH HOH . H 7 HOH A 120 318 124 HOH HOH . H 7 HOH A 121 319 125 HOH HOH . H 7 HOH A 122 320 126 HOH HOH . H 7 HOH A 123 321 127 HOH HOH . H 7 HOH A 124 322 128 HOH HOH . H 7 HOH A 125 323 129 HOH HOH . H 7 HOH A 126 324 130 HOH HOH . H 7 HOH A 127 325 131 HOH HOH . H 7 HOH A 128 326 132 HOH HOH . H 7 HOH A 129 327 133 HOH HOH . H 7 HOH A 130 328 134 HOH HOH . H 7 HOH A 131 329 135 HOH HOH . H 7 HOH A 132 330 136 HOH HOH . H 7 HOH A 133 331 137 HOH HOH . H 7 HOH A 134 332 138 HOH HOH . H 7 HOH A 135 333 139 HOH HOH . H 7 HOH A 136 334 140 HOH HOH . H 7 HOH A 137 335 141 HOH HOH . H 7 HOH A 138 336 142 HOH HOH . H 7 HOH A 139 337 143 HOH HOH . H 7 HOH A 140 338 144 HOH HOH . H 7 HOH A 141 339 145 HOH HOH . H 7 HOH A 142 340 146 HOH HOH . H 7 HOH A 143 341 147 HOH HOH . H 7 HOH A 144 342 148 HOH HOH . H 7 HOH A 145 343 149 HOH HOH . H 7 HOH A 146 344 150 HOH HOH . H 7 HOH A 147 345 151 HOH HOH . H 7 HOH A 148 346 152 HOH HOH . H 7 HOH A 149 347 153 HOH HOH . H 7 HOH A 150 348 154 HOH HOH . H 7 HOH A 151 349 155 HOH HOH . H 7 HOH A 152 350 156 HOH HOH . H 7 HOH A 153 351 157 HOH HOH . H 7 HOH A 154 352 158 HOH HOH . H 7 HOH A 155 353 159 HOH HOH . H 7 HOH A 156 354 160 HOH HOH . H 7 HOH A 157 355 161 HOH HOH . H 7 HOH A 158 356 162 HOH HOH . H 7 HOH A 159 357 163 HOH HOH . H 7 HOH A 160 358 164 HOH HOH . H 7 HOH A 161 359 165 HOH HOH . H 7 HOH A 162 360 166 HOH HOH . H 7 HOH A 163 361 167 HOH HOH . H 7 HOH A 164 362 168 HOH HOH . H 7 HOH A 165 363 169 HOH HOH . H 7 HOH A 166 364 170 HOH HOH . H 7 HOH A 167 365 171 HOH HOH . H 7 HOH A 168 366 172 HOH HOH . H 7 HOH A 169 367 173 HOH HOH . H 7 HOH A 170 368 174 HOH HOH . H 7 HOH A 171 369 175 HOH HOH . H 7 HOH A 172 370 176 HOH HOH . H 7 HOH A 173 371 177 HOH HOH . H 7 HOH A 174 372 178 HOH HOH . H 7 HOH A 175 373 179 HOH HOH . H 7 HOH A 176 374 180 HOH HOH . H 7 HOH A 177 375 181 HOH HOH . H 7 HOH A 178 376 182 HOH HOH . H 7 HOH A 179 377 183 HOH HOH . H 7 HOH A 180 378 184 HOH HOH . H 7 HOH A 181 379 185 HOH HOH . H 7 HOH A 182 380 186 HOH HOH . H 7 HOH A 183 381 187 HOH HOH . H 7 HOH A 184 382 188 HOH HOH . H 7 HOH A 185 383 189 HOH HOH . H 7 HOH A 186 384 190 HOH HOH . H 7 HOH A 187 385 191 HOH HOH . H 7 HOH A 188 386 192 HOH HOH . H 7 HOH A 189 387 193 HOH HOH . H 7 HOH A 190 388 194 HOH HOH . H 7 HOH A 191 389 195 HOH HOH . H 7 HOH A 192 390 196 HOH HOH . H 7 HOH A 193 391 197 HOH HOH . H 7 HOH A 194 392 198 HOH HOH . H 7 HOH A 195 393 199 HOH HOH . H 7 HOH A 196 394 200 HOH HOH . H 7 HOH A 197 395 201 HOH HOH . H 7 HOH A 198 396 202 HOH HOH . H 7 HOH A 199 397 203 HOH HOH . H 7 HOH A 200 398 204 HOH HOH . H 7 HOH A 201 399 205 HOH HOH . H 7 HOH A 202 400 206 HOH HOH . H 7 HOH A 203 401 207 HOH HOH . H 7 HOH A 204 402 208 HOH HOH . H 7 HOH A 205 403 209 HOH HOH . H 7 HOH A 206 404 210 HOH HOH . H 7 HOH A 207 405 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 -26.367 20.831 0.854 1 22.33 ? S SO4 2 A 1 HETATM 2 O O1 SO4 . . . D 4 -25.703 19.531 0.522 1 20.12 ? O1 SO4 2 A 1 HETATM 3 O O2 SO4 . . . D 4 -26.442 20.898 2.31 1 25.24 ? O2 SO4 2 A 1 HETATM 4 O O3 SO4 . . . D 4 -27.773 20.73 0.355 1 23.87 ? O3 SO4 2 A 1 HETATM 5 O O4 SO4 . . . D 4 -25.741 22.011 0.274 1 24.24 ? O4 SO4 2 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #