data_3HP2 # _model_server_result.job_id HV3k95qbotNiv7QsRQbfVA _model_server_result.datetime_utc '2024-10-10 01:22:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hp2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 3HP2 # _exptl.entry_id 3HP2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.24 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-benzyl-4-(benzyloxy)-3-bromopyridin-2(1H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HP2 _cell.length_a 65.246 _cell.length_b 74.44 _cell.length_c 77.238 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HP2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 Br N O2' _chem_comp.formula_weight 370.24 _chem_comp.id P36 _chem_comp.mon_nstd_flag . _chem_comp.name 1-benzyl-4-(benzyloxy)-3-bromopyridin-2(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 P36 doub 267 n y C1 C2 P36 sing 268 n y C1 H1 P36 sing 269 n n C2 C3 P36 doub 270 n y C2 H2 P36 sing 271 n n C4 C3 P36 sing 272 n y C3 H3 P36 sing 273 n n C5 C4 P36 doub 274 n y C4 H4 P36 sing 275 n n C7 C5 P36 sing 276 n n C6 C5 P36 sing 277 n y C6 H6 P36 sing 278 n n N8 C7 P36 sing 279 n n C7 H7 P36 sing 280 n n C7 H7A P36 sing 281 n n C9 N8 P36 sing 282 n n C13 N8 P36 sing 283 n n C10 C9 P36 sing 284 n n C9 O14 P36 doub 285 n n BR23 C10 P36 sing 286 n n C11 C10 P36 doub 287 n n O15 C11 P36 sing 288 n n C11 C12 P36 sing 289 n n C12 C13 P36 doub 290 n n C12 H12 P36 sing 291 n n C13 H13 P36 sing 292 n n C16 O15 P36 sing 293 n n C17 C16 P36 sing 294 n n C16 H16 P36 sing 295 n n C16 H16A P36 sing 296 n n C18 C17 P36 doub 297 n y C22 C17 P36 sing 298 n y C19 C18 P36 sing 299 n y C18 H18 P36 sing 300 n n C20 C19 P36 doub 301 n y C19 H19 P36 sing 302 n n C20 C21 P36 sing 303 n y C20 H20 P36 sing 304 n n C21 C22 P36 doub 305 n y C21 H21 P36 sing 306 n n C22 H22 P36 sing 307 n n # _atom_sites.entry_id 3HP2 _atom_sites.fract_transf_matrix[1][1] 0.015327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P36 A 1 401 401 P36 P36 . C 3 I46 A 1 402 402 I46 I46 . D 3 I46 A 1 403 403 I46 I46 . E 4 HOH A 1 501 501 HOH HOH . E 4 HOH A 2 502 502 HOH HOH . E 4 HOH A 3 503 503 HOH HOH . E 4 HOH A 4 504 504 HOH HOH . E 4 HOH A 5 505 505 HOH HOH . E 4 HOH A 6 506 506 HOH HOH . E 4 HOH A 7 507 507 HOH HOH . E 4 HOH A 8 508 508 HOH HOH . E 4 HOH A 9 509 509 HOH HOH . E 4 HOH A 10 511 511 HOH HOH . E 4 HOH A 11 512 512 HOH HOH . E 4 HOH A 12 513 513 HOH HOH . E 4 HOH A 13 514 514 HOH HOH . E 4 HOH A 14 515 515 HOH HOH . E 4 HOH A 15 516 516 HOH HOH . E 4 HOH A 16 517 517 HOH HOH . E 4 HOH A 17 518 518 HOH HOH . E 4 HOH A 18 519 519 HOH HOH . E 4 HOH A 19 520 520 HOH HOH . E 4 HOH A 20 521 521 HOH HOH . E 4 HOH A 21 522 522 HOH HOH . E 4 HOH A 22 523 523 HOH HOH . E 4 HOH A 23 524 524 HOH HOH . E 4 HOH A 24 525 525 HOH HOH . E 4 HOH A 25 527 527 HOH HOH . E 4 HOH A 26 528 528 HOH HOH . E 4 HOH A 27 529 529 HOH HOH . E 4 HOH A 28 530 530 HOH HOH . E 4 HOH A 29 531 531 HOH HOH . E 4 HOH A 30 532 532 HOH HOH . E 4 HOH A 31 533 533 HOH HOH . E 4 HOH A 32 534 534 HOH HOH . E 4 HOH A 33 535 535 HOH HOH . E 4 HOH A 34 536 536 HOH HOH . E 4 HOH A 35 537 537 HOH HOH . E 4 HOH A 36 538 538 HOH HOH . E 4 HOH A 37 539 539 HOH HOH . E 4 HOH A 38 540 540 HOH HOH . E 4 HOH A 39 541 541 HOH HOH . E 4 HOH A 40 542 542 HOH HOH . E 4 HOH A 41 543 543 HOH HOH . E 4 HOH A 42 544 544 HOH HOH . E 4 HOH A 43 545 545 HOH HOH . E 4 HOH A 44 546 546 HOH HOH . E 4 HOH A 45 547 547 HOH HOH . E 4 HOH A 46 549 549 HOH HOH . E 4 HOH A 47 550 550 HOH HOH . E 4 HOH A 48 551 551 HOH HOH . E 4 HOH A 49 552 552 HOH HOH . E 4 HOH A 50 553 553 HOH HOH . E 4 HOH A 51 554 554 HOH HOH . E 4 HOH A 52 555 555 HOH HOH . E 4 HOH A 53 556 556 HOH HOH . E 4 HOH A 54 557 557 HOH HOH . E 4 HOH A 55 558 558 HOH HOH . E 4 HOH A 56 559 559 HOH HOH . E 4 HOH A 57 560 560 HOH HOH . E 4 HOH A 58 561 561 HOH HOH . E 4 HOH A 59 562 562 HOH HOH . E 4 HOH A 60 563 563 HOH HOH . E 4 HOH A 61 564 564 HOH HOH . E 4 HOH A 62 565 565 HOH HOH . E 4 HOH A 63 566 566 HOH HOH . E 4 HOH A 64 567 567 HOH HOH . E 4 HOH A 65 569 569 HOH HOH . E 4 HOH A 66 570 570 HOH HOH . E 4 HOH A 67 571 571 HOH HOH . E 4 HOH A 68 572 572 HOH HOH . E 4 HOH A 69 573 573 HOH HOH . E 4 HOH A 70 574 574 HOH HOH . E 4 HOH A 71 575 575 HOH HOH . E 4 HOH A 72 576 576 HOH HOH . E 4 HOH A 73 577 577 HOH HOH . E 4 HOH A 74 578 578 HOH HOH . E 4 HOH A 75 580 580 HOH HOH . E 4 HOH A 76 581 581 HOH HOH . E 4 HOH A 77 582 582 HOH HOH . E 4 HOH A 78 583 583 HOH HOH . E 4 HOH A 79 584 584 HOH HOH . E 4 HOH A 80 585 585 HOH HOH . E 4 HOH A 81 586 586 HOH HOH . E 4 HOH A 82 587 587 HOH HOH . E 4 HOH A 83 588 588 HOH HOH . E 4 HOH A 84 589 589 HOH HOH . E 4 HOH A 85 590 590 HOH HOH . E 4 HOH A 86 591 591 HOH HOH . E 4 HOH A 87 592 592 HOH HOH . E 4 HOH A 88 593 593 HOH HOH . E 4 HOH A 89 594 594 HOH HOH . E 4 HOH A 90 595 595 HOH HOH . E 4 HOH A 91 596 596 HOH HOH . E 4 HOH A 92 597 597 HOH HOH . E 4 HOH A 93 598 598 HOH HOH . E 4 HOH A 94 599 599 HOH HOH . E 4 HOH A 95 600 600 HOH HOH . E 4 HOH A 96 601 601 HOH HOH . E 4 HOH A 97 602 602 HOH HOH . E 4 HOH A 98 603 603 HOH HOH . E 4 HOH A 99 604 604 HOH HOH . E 4 HOH A 100 605 605 HOH HOH . E 4 HOH A 101 606 606 HOH HOH . E 4 HOH A 102 607 607 HOH HOH . E 4 HOH A 103 608 608 HOH HOH . E 4 HOH A 104 609 609 HOH HOH . E 4 HOH A 105 610 610 HOH HOH . E 4 HOH A 106 611 611 HOH HOH . E 4 HOH A 107 612 612 HOH HOH . E 4 HOH A 108 613 613 HOH HOH . E 4 HOH A 109 614 614 HOH HOH . E 4 HOH A 110 615 615 HOH HOH . E 4 HOH A 111 616 616 HOH HOH . E 4 HOH A 112 617 617 HOH HOH . E 4 HOH A 113 618 618 HOH HOH . E 4 HOH A 114 619 619 HOH HOH . E 4 HOH A 115 620 620 HOH HOH . E 4 HOH A 116 621 621 HOH HOH . E 4 HOH A 117 622 622 HOH HOH . E 4 HOH A 118 623 623 HOH HOH . E 4 HOH A 119 624 624 HOH HOH . E 4 HOH A 120 625 625 HOH HOH . E 4 HOH A 121 626 626 HOH HOH . E 4 HOH A 122 627 627 HOH HOH . E 4 HOH A 123 628 628 HOH HOH . E 4 HOH A 124 629 629 HOH HOH . E 4 HOH A 125 630 630 HOH HOH . E 4 HOH A 126 631 631 HOH HOH . E 4 HOH A 127 632 632 HOH HOH . E 4 HOH A 128 633 633 HOH HOH . E 4 HOH A 129 634 634 HOH HOH . E 4 HOH A 130 635 635 HOH HOH . E 4 HOH A 131 636 636 HOH HOH . E 4 HOH A 132 637 637 HOH HOH . E 4 HOH A 133 638 638 HOH HOH . E 4 HOH A 134 639 639 HOH HOH . E 4 HOH A 135 640 640 HOH HOH . E 4 HOH A 136 641 641 HOH HOH . E 4 HOH A 137 642 642 HOH HOH . E 4 HOH A 138 643 643 HOH HOH . E 4 HOH A 139 644 644 HOH HOH . E 4 HOH A 140 645 645 HOH HOH . E 4 HOH A 141 646 646 HOH HOH . E 4 HOH A 142 647 647 HOH HOH . E 4 HOH A 143 648 648 HOH HOH . E 4 HOH A 144 649 649 HOH HOH . E 4 HOH A 145 650 650 HOH HOH . E 4 HOH A 146 651 651 HOH HOH . E 4 HOH A 147 652 652 HOH HOH . E 4 HOH A 148 653 653 HOH HOH . E 4 HOH A 149 654 654 HOH HOH . E 4 HOH A 150 655 655 HOH HOH . E 4 HOH A 151 656 656 HOH HOH . E 4 HOH A 152 657 657 HOH HOH . E 4 HOH A 153 658 658 HOH HOH . E 4 HOH A 154 659 659 HOH HOH . E 4 HOH A 155 660 660 HOH HOH . E 4 HOH A 156 661 661 HOH HOH . E 4 HOH A 157 662 662 HOH HOH . E 4 HOH A 158 663 663 HOH HOH . E 4 HOH A 159 664 664 HOH HOH . E 4 HOH A 160 665 665 HOH HOH . E 4 HOH A 161 666 666 HOH HOH . E 4 HOH A 162 667 667 HOH HOH . E 4 HOH A 163 668 668 HOH HOH . E 4 HOH A 164 669 669 HOH HOH . E 4 HOH A 165 670 670 HOH HOH . E 4 HOH A 166 672 672 HOH HOH . E 4 HOH A 167 673 673 HOH HOH . E 4 HOH A 168 674 674 HOH HOH . E 4 HOH A 169 675 675 HOH HOH . E 4 HOH A 170 676 676 HOH HOH . E 4 HOH A 171 677 677 HOH HOH . E 4 HOH A 172 678 678 HOH HOH . E 4 HOH A 173 679 679 HOH HOH . E 4 HOH A 174 680 680 HOH HOH . E 4 HOH A 175 681 681 HOH HOH . E 4 HOH A 176 682 682 HOH HOH . E 4 HOH A 177 683 683 HOH HOH . E 4 HOH A 178 684 684 HOH HOH . E 4 HOH A 179 685 685 HOH HOH . E 4 HOH A 180 686 686 HOH HOH . E 4 HOH A 181 687 687 HOH HOH . E 4 HOH A 182 688 688 HOH HOH . E 4 HOH A 183 689 689 HOH HOH . E 4 HOH A 184 690 690 HOH HOH . E 4 HOH A 185 691 691 HOH HOH . E 4 HOH A 186 692 692 HOH HOH . E 4 HOH A 187 693 693 HOH HOH . E 4 HOH A 188 694 694 HOH HOH . E 4 HOH A 189 695 695 HOH HOH . E 4 HOH A 190 696 696 HOH HOH . E 4 HOH A 191 697 697 HOH HOH . E 4 HOH A 192 698 698 HOH HOH . E 4 HOH A 193 699 699 HOH HOH . E 4 HOH A 194 700 700 HOH HOH . E 4 HOH A 195 701 701 HOH HOH . E 4 HOH A 196 702 702 HOH HOH . E 4 HOH A 197 703 703 HOH HOH . E 4 HOH A 198 704 704 HOH HOH . E 4 HOH A 199 705 705 HOH HOH . E 4 HOH A 200 706 706 HOH HOH . E 4 HOH A 201 707 707 HOH HOH . E 4 HOH A 202 708 708 HOH HOH . E 4 HOH A 203 709 709 HOH HOH . E 4 HOH A 204 710 710 HOH HOH . E 4 HOH A 205 711 711 HOH HOH . E 4 HOH A 206 712 712 HOH HOH . E 4 HOH A 207 713 713 HOH HOH . E 4 HOH A 208 714 714 HOH HOH . E 4 HOH A 209 715 715 HOH HOH . E 4 HOH A 210 716 716 HOH HOH . E 4 HOH A 211 717 717 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 P36 . . . B 2 35.823 39.615 27.047 1 39.83 ? C1 P36 401 A 1 HETATM 2 C C2 P36 . . . B 2 35.309 39.089 28.213 1 38.02 ? C2 P36 401 A 1 HETATM 3 C C3 P36 . . . B 2 34.037 38.568 28.233 1 39.73 ? C3 P36 401 A 1 HETATM 4 C C4 P36 . . . B 2 33.277 38.569 27.082 1 37.89 ? C4 P36 401 A 1 HETATM 5 C C5 P36 . . . B 2 33.798 39.099 25.918 1 37.82 ? C5 P36 401 A 1 HETATM 6 C C6 P36 . . . B 2 35.071 39.624 25.893 1 36.58 ? C6 P36 401 A 1 HETATM 7 C C7 P36 . . . B 2 32.963 39.094 24.691 1 37.03 ? C7 P36 401 A 1 HETATM 8 N N8 P36 . . . B 2 33.683 38.785 23.48 1 35.89 ? N8 P36 401 A 1 HETATM 9 C C9 P36 . . . B 2 34.071 39.834 22.68 1 35.48 ? C9 P36 401 A 1 HETATM 10 C C10 P36 . . . B 2 34.789 39.475 21.449 1 36.25 ? C10 P36 401 A 1 HETATM 11 C C11 P36 . . . B 2 35.046 38.188 21.171 1 36.32 ? C11 P36 401 A 1 HETATM 12 C C12 P36 . . . B 2 34.624 37.131 22.056 1 36.64 ? C12 P36 401 A 1 HETATM 13 C C13 P36 . . . B 2 33.96 37.467 23.172 1 37.2 ? C13 P36 401 A 1 HETATM 14 O O14 P36 . . . B 2 33.883 41.02 22.887 1 34.8 ? O14 P36 401 A 1 HETATM 15 O O15 P36 . . . B 2 35.725 37.923 19.994 1 36.3 ? O15 P36 401 A 1 HETATM 16 C C16 P36 . . . B 2 36.062 36.559 19.732 1 35.14 ? C16 P36 401 A 1 HETATM 17 C C17 P36 . . . B 2 36.763 36.651 18.414 1 35.21 ? C17 P36 401 A 1 HETATM 18 C C18 P36 . . . B 2 36.095 36.35 17.249 1 35.2 ? C18 P36 401 A 1 HETATM 19 C C19 P36 . . . B 2 36.739 36.44 16.033 1 35.99 ? C19 P36 401 A 1 HETATM 20 C C20 P36 . . . B 2 38.053 36.852 15.976 1 35.56 ? C20 P36 401 A 1 HETATM 21 C C21 P36 . . . B 2 38.719 37.163 17.141 1 34.19 ? C21 P36 401 A 1 HETATM 22 C C22 P36 . . . B 2 38.08 37.056 18.354 1 33.58 ? C22 P36 401 A 1 HETATM 23 BR BR23 P36 . . . B 2 35.251 40.928 20.402 1 39.67 ? BR23 P36 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #