data_3HPI # _model_server_result.job_id SBeK5n27EhvOkjCH3Tl13Q _model_server_result.datetime_utc '2025-03-05 01:49:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":375}' # _entry.id 3HPI # _exptl.entry_id 3HPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HPI _cell.length_a 60.042 _cell.length_b 85.229 _cell.length_c 132.864 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,M 1 1 B,D,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 L N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC A 371 SUC 2 n C FRU 2 C 2 FRU A 371 SUC 2 n D GLC 1 D 1 GLC B 371 SUC 2 n D FRU 2 D 2 FRU B 371 SUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C1 GLC . C GLC 1 1_555 C O2 FRU . C FRU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.232 sing covale ? covale2 D C1 GLC . D GLC 1 1_555 D O2 FRU . D FRU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.255 sing metalc ? metalc1 A OE2 GLU 40 A GLU 38 1_555 K ZN ZN . B ZN 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc2 A NE2 HIS 205 A HIS 203 1_555 E ZN ZN . A ZN 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc3 A OD2 ASP 211 A ASP 209 1_555 F ZN ZN . A ZN 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc4 A OG SER 213 A SER 211 1_555 H ZN ZN . B ZN 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc5 E ZN ZN . A ZN 372 1_555 M O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc6 E ZN ZN . A ZN 372 1_555 G O ACT . A ACT 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc7 E ZN ZN . A ZN 372 1_555 G OXT ACT . A ACT 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc8 F ZN ZN . A ZN 374 1_555 B OE1 GLU 40 B GLU 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc9 M O HOH . A HOH 376 1_555 H ZN ZN . B ZN 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc10 M O HOH . A HOH 377 1_555 H ZN ZN . B ZN 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc11 B NE2 HIS 41 B HIS 39 1_555 H ZN ZN . B ZN 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc12 B NE2 HIS 205 B HIS 203 1_555 I ZN ZN . B ZN 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc13 B OD2 ASP 211 B ASP 209 1_555 K ZN ZN . B ZN 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc14 I ZN ZN . B ZN 372 1_555 L O ACT . B ACT 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc15 I ZN ZN . B ZN 372 1_555 N O HOH . B HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc16 J ZN ZN . B ZN 373 1_555 N O HOH . B HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3HPI _atom_sites.fract_transf_matrix[1][1] 0.016655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011733 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007526 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 372 372 ZN ZN . F 3 ZN A 1 374 374 ZN ZN . G 4 ACT A 1 375 375 ACT ACT . H 3 ZN B 1 371 373 ZN ZN . I 3 ZN B 1 372 372 ZN ZN . J 3 ZN B 1 373 373 ZN ZN . K 3 ZN B 1 374 374 ZN ZN . L 4 ACT B 1 376 375 ACT ACT . M 5 HOH A 1 373 12 HOH HOH . M 5 HOH A 2 376 1 HOH HOH . M 5 HOH A 3 377 2 HOH HOH . M 5 HOH A 4 378 5 HOH HOH . M 5 HOH A 5 379 6 HOH HOH . M 5 HOH A 6 380 7 HOH HOH . M 5 HOH A 7 381 10 HOH HOH . M 5 HOH A 8 382 1 HOH HOH . M 5 HOH A 9 383 2 HOH HOH . M 5 HOH A 10 384 3 HOH HOH . M 5 HOH A 11 385 5 HOH HOH . M 5 HOH A 12 386 7 HOH HOH . M 5 HOH A 13 387 8 HOH HOH . M 5 HOH A 14 388 10 HOH HOH . M 5 HOH A 15 389 11 HOH HOH . M 5 HOH A 16 390 12 HOH HOH . M 5 HOH A 17 391 13 HOH HOH . M 5 HOH A 18 392 20 HOH HOH . M 5 HOH A 19 393 22 HOH HOH . M 5 HOH A 20 394 23 HOH HOH . M 5 HOH A 21 395 25 HOH HOH . M 5 HOH A 22 396 27 HOH HOH . M 5 HOH A 23 397 28 HOH HOH . M 5 HOH A 24 398 29 HOH HOH . M 5 HOH A 25 399 31 HOH HOH . M 5 HOH A 26 400 34 HOH HOH . M 5 HOH A 27 401 35 HOH HOH . M 5 HOH A 28 402 38 HOH HOH . M 5 HOH A 29 403 41 HOH HOH . M 5 HOH A 30 404 42 HOH HOH . M 5 HOH A 31 405 43 HOH HOH . M 5 HOH A 32 406 45 HOH HOH . M 5 HOH A 33 407 49 HOH HOH . M 5 HOH A 34 408 50 HOH HOH . M 5 HOH A 35 409 53 HOH HOH . M 5 HOH A 36 410 54 HOH HOH . M 5 HOH A 37 411 58 HOH HOH . M 5 HOH A 38 412 63 HOH HOH . M 5 HOH A 39 413 65 HOH HOH . M 5 HOH A 40 414 66 HOH HOH . M 5 HOH A 41 415 69 HOH HOH . M 5 HOH A 42 416 74 HOH HOH . M 5 HOH A 43 417 75 HOH HOH . M 5 HOH A 44 418 78 HOH HOH . M 5 HOH A 45 419 80 HOH HOH . M 5 HOH A 46 420 81 HOH HOH . M 5 HOH A 47 421 83 HOH HOH . M 5 HOH A 48 422 84 HOH HOH . M 5 HOH A 49 423 85 HOH HOH . M 5 HOH A 50 424 86 HOH HOH . M 5 HOH A 51 425 90 HOH HOH . M 5 HOH A 52 426 91 HOH HOH . M 5 HOH A 53 427 93 HOH HOH . M 5 HOH A 54 428 94 HOH HOH . M 5 HOH A 55 429 96 HOH HOH . M 5 HOH A 56 430 97 HOH HOH . M 5 HOH A 57 431 101 HOH HOH . M 5 HOH A 58 432 102 HOH HOH . M 5 HOH A 59 433 106 HOH HOH . M 5 HOH A 60 434 107 HOH HOH . M 5 HOH A 61 435 108 HOH HOH . M 5 HOH A 62 436 109 HOH HOH . M 5 HOH A 63 437 110 HOH HOH . M 5 HOH A 64 438 111 HOH HOH . M 5 HOH A 65 439 112 HOH HOH . M 5 HOH A 66 440 113 HOH HOH . M 5 HOH A 67 441 117 HOH HOH . M 5 HOH A 68 442 119 HOH HOH . M 5 HOH A 69 443 120 HOH HOH . M 5 HOH A 70 444 121 HOH HOH . M 5 HOH A 71 445 124 HOH HOH . M 5 HOH A 72 446 126 HOH HOH . M 5 HOH A 73 447 128 HOH HOH . M 5 HOH A 74 448 133 HOH HOH . M 5 HOH A 75 449 134 HOH HOH . M 5 HOH A 76 450 145 HOH HOH . M 5 HOH A 77 451 146 HOH HOH . M 5 HOH A 78 452 147 HOH HOH . M 5 HOH A 79 453 149 HOH HOH . M 5 HOH A 80 454 151 HOH HOH . M 5 HOH A 81 455 152 HOH HOH . M 5 HOH A 82 456 153 HOH HOH . M 5 HOH A 83 457 155 HOH HOH . M 5 HOH A 84 458 156 HOH HOH . M 5 HOH A 85 459 158 HOH HOH . M 5 HOH A 86 460 160 HOH HOH . M 5 HOH A 87 461 161 HOH HOH . M 5 HOH A 88 462 162 HOH HOH . M 5 HOH A 89 463 167 HOH HOH . M 5 HOH A 90 464 168 HOH HOH . M 5 HOH A 91 465 169 HOH HOH . M 5 HOH A 92 466 170 HOH HOH . M 5 HOH A 93 467 171 HOH HOH . M 5 HOH A 94 468 172 HOH HOH . M 5 HOH A 95 469 173 HOH HOH . M 5 HOH A 96 470 174 HOH HOH . M 5 HOH A 97 471 176 HOH HOH . M 5 HOH A 98 472 178 HOH HOH . M 5 HOH A 99 473 179 HOH HOH . M 5 HOH A 100 474 180 HOH HOH . M 5 HOH A 101 475 181 HOH HOH . M 5 HOH A 102 476 182 HOH HOH . M 5 HOH A 103 477 183 HOH HOH . M 5 HOH A 104 478 187 HOH HOH . M 5 HOH A 105 479 188 HOH HOH . M 5 HOH A 106 480 189 HOH HOH . M 5 HOH A 107 481 190 HOH HOH . N 5 HOH B 1 377 11 HOH HOH . N 5 HOH B 2 378 3 HOH HOH . N 5 HOH B 3 379 4 HOH HOH . N 5 HOH B 4 380 8 HOH HOH . N 5 HOH B 5 381 9 HOH HOH . N 5 HOH B 6 382 4 HOH HOH . N 5 HOH B 7 383 6 HOH HOH . N 5 HOH B 8 384 9 HOH HOH . N 5 HOH B 9 385 14 HOH HOH . N 5 HOH B 10 386 15 HOH HOH . N 5 HOH B 11 387 16 HOH HOH . N 5 HOH B 12 388 17 HOH HOH . N 5 HOH B 13 389 18 HOH HOH . N 5 HOH B 14 390 19 HOH HOH . N 5 HOH B 15 391 21 HOH HOH . N 5 HOH B 16 392 24 HOH HOH . N 5 HOH B 17 393 26 HOH HOH . N 5 HOH B 18 394 30 HOH HOH . N 5 HOH B 19 395 32 HOH HOH . N 5 HOH B 20 396 33 HOH HOH . N 5 HOH B 21 397 36 HOH HOH . N 5 HOH B 22 398 37 HOH HOH . N 5 HOH B 23 399 39 HOH HOH . N 5 HOH B 24 400 40 HOH HOH . N 5 HOH B 25 401 44 HOH HOH . N 5 HOH B 26 402 46 HOH HOH . N 5 HOH B 27 403 47 HOH HOH . N 5 HOH B 28 404 48 HOH HOH . N 5 HOH B 29 405 51 HOH HOH . N 5 HOH B 30 406 52 HOH HOH . N 5 HOH B 31 407 55 HOH HOH . N 5 HOH B 32 408 56 HOH HOH . N 5 HOH B 33 409 57 HOH HOH . N 5 HOH B 34 410 59 HOH HOH . N 5 HOH B 35 411 60 HOH HOH . N 5 HOH B 36 412 61 HOH HOH . N 5 HOH B 37 413 62 HOH HOH . N 5 HOH B 38 414 64 HOH HOH . N 5 HOH B 39 415 67 HOH HOH . N 5 HOH B 40 416 68 HOH HOH . N 5 HOH B 41 417 70 HOH HOH . N 5 HOH B 42 418 71 HOH HOH . N 5 HOH B 43 419 72 HOH HOH . N 5 HOH B 44 420 73 HOH HOH . N 5 HOH B 45 421 76 HOH HOH . N 5 HOH B 46 422 77 HOH HOH . N 5 HOH B 47 423 79 HOH HOH . N 5 HOH B 48 424 82 HOH HOH . N 5 HOH B 49 425 87 HOH HOH . N 5 HOH B 50 426 88 HOH HOH . N 5 HOH B 51 427 89 HOH HOH . N 5 HOH B 52 428 92 HOH HOH . N 5 HOH B 53 429 95 HOH HOH . N 5 HOH B 54 430 98 HOH HOH . N 5 HOH B 55 431 99 HOH HOH . N 5 HOH B 56 432 100 HOH HOH . N 5 HOH B 57 433 103 HOH HOH . N 5 HOH B 58 434 104 HOH HOH . N 5 HOH B 59 435 105 HOH HOH . N 5 HOH B 60 436 114 HOH HOH . N 5 HOH B 61 437 115 HOH HOH . N 5 HOH B 62 438 116 HOH HOH . N 5 HOH B 63 439 118 HOH HOH . N 5 HOH B 64 440 122 HOH HOH . N 5 HOH B 65 441 123 HOH HOH . N 5 HOH B 66 442 125 HOH HOH . N 5 HOH B 67 443 127 HOH HOH . N 5 HOH B 68 444 129 HOH HOH . N 5 HOH B 69 445 130 HOH HOH . N 5 HOH B 70 446 131 HOH HOH . N 5 HOH B 71 447 132 HOH HOH . N 5 HOH B 72 448 135 HOH HOH . N 5 HOH B 73 449 136 HOH HOH . N 5 HOH B 74 450 137 HOH HOH . N 5 HOH B 75 451 138 HOH HOH . N 5 HOH B 76 452 139 HOH HOH . N 5 HOH B 77 453 140 HOH HOH . N 5 HOH B 78 454 141 HOH HOH . N 5 HOH B 79 455 142 HOH HOH . N 5 HOH B 80 456 143 HOH HOH . N 5 HOH B 81 457 144 HOH HOH . N 5 HOH B 82 458 148 HOH HOH . N 5 HOH B 83 459 150 HOH HOH . N 5 HOH B 84 460 154 HOH HOH . N 5 HOH B 85 461 157 HOH HOH . N 5 HOH B 86 462 159 HOH HOH . N 5 HOH B 87 463 163 HOH HOH . N 5 HOH B 88 464 164 HOH HOH . N 5 HOH B 89 465 165 HOH HOH . N 5 HOH B 90 466 166 HOH HOH . N 5 HOH B 91 467 175 HOH HOH . N 5 HOH B 92 468 177 HOH HOH . N 5 HOH B 93 469 184 HOH HOH . N 5 HOH B 94 470 185 HOH HOH . N 5 HOH B 95 471 186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . G 4 25.366 24.165 -28.698 1 43 ? C ACT 375 A 1 HETATM 2 O O ACT . . . G 4 24.635 23.862 -29.625 1 42.88 ? O ACT 375 A 1 HETATM 3 O OXT ACT . . . G 4 25.649 23.332 -27.846 1 41.44 ? OXT ACT 375 A 1 HETATM 4 C CH3 ACT . . . G 4 25.923 25.566 -28.609 1 44.16 ? CH3 ACT 375 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #