data_3HQQ # _model_server_result.job_id zLpQ5JV5ksmtARiH_vM76Q _model_server_result.datetime_utc '2024-11-04 20:09:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":700}' # _entry.id 3HQQ # _exptl.entry_id 3HQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HQQ _cell.length_a 243.84 _cell.length_b 254.69 _cell.length_c 892.49 _cell.Z_PDB 192 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 PISA tetrameric 4 author_and_software_defined_assembly 4 PISA tetrameric 4 author_and_software_defined_assembly 5 PISA tetrameric 4 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,H,I,J,Y,FA,GA,HA 1 1 B,C,O,P,Z,AA,MA,NA 2 1 D,E,F,G,BA,CA,DA,EA 3 1 K,L,M,N,IA,JA,KA,LA 4 1 Q,R,S,T,OA,PA,QA,RA 5 1 U,V,W,X,SA,TA,UA,VA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 JA N N ? 2 KA N N ? 2 LA N N ? 2 MA N N ? 2 NA N N ? 2 OA N N ? 2 PA N N ? 2 QA N N ? 2 RA N N ? 2 SA N N ? 2 TA N N ? 2 UA N N ? 2 VA N N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FDP _chem_comp.mon_nstd_flag n _chem_comp.name 2,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms FRUCTOSE-2,6-DIPHOSPHATE;2,6-di-O-phosphono-beta-D-fructose;2,6-di-O-phosphono-D-fructose;2,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FDP doub 83 n n P1 O2P FDP sing 84 n n P1 O3P FDP sing 85 n n P1 O2 FDP sing 86 n n O2P HOP2 FDP sing 87 n n O3P HOP3 FDP sing 88 n n O1 C1 FDP sing 89 n n O1 HO1 FDP sing 90 n n C1 C2 FDP sing 91 n n C1 H11 FDP sing 92 n n C1 H12 FDP sing 93 n n C2 O2 FDP sing 94 n n C2 C3 FDP sing 95 n n C2 O5 FDP sing 96 n n C3 O3 FDP sing 97 n n C3 C4 FDP sing 98 n n C3 H3 FDP sing 99 n n O3 HO3 FDP sing 100 n n C4 O4 FDP sing 101 n n C4 C5 FDP sing 102 n n C4 H4 FDP sing 103 n n O4 HO4 FDP sing 104 n n C5 O5 FDP sing 105 n n C5 C6 FDP sing 106 n n C5 H5 FDP sing 107 n n C6 O6 FDP sing 108 n n C6 H61 FDP sing 109 n n C6 H62 FDP sing 110 n n O6 P2 FDP sing 111 n n P2 O4P FDP doub 112 n n P2 O5P FDP sing 113 n n P2 O6P FDP sing 114 n n O5P HOP5 FDP sing 115 n n O6P HOP6 FDP sing 116 n n # _pdbx_chem_comp_identifier.comp_id FDP _pdbx_chem_comp_identifier.identifier b-D-Fruf2PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3HQQ _atom_sites.fract_transf_matrix[1][1] 0.004101 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003926 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Y 2 FDP A 1 700 700 FDP FDP . Z 2 FDP B 1 700 700 FDP FDP . AA 2 FDP C 1 700 700 FDP FDP . BA 2 FDP D 1 700 700 FDP FDP . CA 2 FDP E 1 700 700 FDP FDP . DA 2 FDP F 1 700 700 FDP FDP . EA 2 FDP G 1 700 700 FDP FDP . FA 2 FDP H 1 700 700 FDP FDP . GA 2 FDP I 1 700 700 FDP FDP . HA 2 FDP J 1 700 700 FDP FDP . IA 2 FDP K 1 700 700 FDP FDP . JA 2 FDP L 1 700 700 FDP FDP . KA 2 FDP M 1 700 700 FDP FDP . LA 2 FDP N 1 700 700 FDP FDP . MA 2 FDP O 1 700 700 FDP FDP . NA 2 FDP P 1 700 700 FDP FDP . OA 2 FDP Q 1 700 700 FDP FDP . PA 2 FDP R 1 700 700 FDP FDP . QA 2 FDP S 1 700 700 FDP FDP . RA 2 FDP T 1 700 700 FDP FDP . SA 2 FDP U 1 700 700 FDP FDP . TA 2 FDP V 1 700 700 FDP FDP . UA 2 FDP W 1 700 700 FDP FDP . VA 2 FDP X 1 700 700 FDP FDP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FDP . . . JA 2 39.329 133.288 -151.304 1 35.59 ? P1 FDP 700 L 1 HETATM 2 O O1P FDP . . . JA 2 40.587 133.678 -150.633 1 34.65 ? O1P FDP 700 L 1 HETATM 3 O O2P FDP . . . JA 2 38.24 134.303 -151.111 1 32.81 ? O2P FDP 700 L 1 HETATM 4 O O3P FDP . . . JA 2 39.441 133.028 -152.766 1 34.38 ? O3P FDP 700 L 1 HETATM 5 O O1 FDP . . . JA 2 39.374 130.346 -152.654 1 30.65 ? O1 FDP 700 L 1 HETATM 6 C C1 FDP . . . JA 2 40.132 130.227 -151.481 1 34.39 ? C1 FDP 700 L 1 HETATM 7 C C2 FDP . . . JA 2 39.271 130.763 -150.347 1 34.07 ? C2 FDP 700 L 1 HETATM 8 O O2 FDP . . . JA 2 38.622 131.99 -150.68 1 34.92 ? O2 FDP 700 L 1 HETATM 9 C C3 FDP . . . JA 2 40.058 130.694 -149.072 1 31.51 ? C3 FDP 700 L 1 HETATM 10 O O3 FDP . . . JA 2 40.906 131.826 -148.941 1 30.55 ? O3 FDP 700 L 1 HETATM 11 C C4 FDP . . . JA 2 38.92 130.716 -148.089 1 32.1 ? C4 FDP 700 L 1 HETATM 12 O O4 FDP . . . JA 2 39.378 130.31 -146.866 1 25.76 ? O4 FDP 700 L 1 HETATM 13 C C5 FDP . . . JA 2 38.031 129.684 -148.674 1 31.21 ? C5 FDP 700 L 1 HETATM 14 O O5 FDP . . . JA 2 38.27 129.796 -150.096 1 34.72 ? O5 FDP 700 L 1 HETATM 15 C C6 FDP . . . JA 2 36.617 130.181 -148.422 1 30.08 ? C6 FDP 700 L 1 HETATM 16 O O6 FDP . . . JA 2 35.625 129.283 -148.996 1 32.11 ? O6 FDP 700 L 1 HETATM 17 P P2 FDP . . . JA 2 34.17 129.177 -148.42 1 33.74 ? P2 FDP 700 L 1 HETATM 18 O O4P FDP . . . JA 2 34.088 128.976 -146.946 1 32.56 ? O4P FDP 700 L 1 HETATM 19 O O5P FDP . . . JA 2 33.552 130.441 -148.806 1 32.23 ? O5P FDP 700 L 1 HETATM 20 O O6P FDP . . . JA 2 33.455 128.133 -149.224 1 29.81 ? O6P FDP 700 L 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 79 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #