data_3HQQ
#
_model_server_result.job_id            eqsuYMPxPnGAcjPxuiHIBg 
_model_server_result.datetime_utc      '2024-11-04 20:09:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hqq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"OA","auth_seq_id":700}' 
#
_entry.id    3HQQ 
#
_exptl.entry_id    3HQQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.116 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2,6-di-O-phosphono-beta-D-fructofuranose 
_entity.pdbx_number_of_molecules    24 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HQQ 
_cell.length_a            243.84 
_cell.length_b            254.69 
_cell.length_c            892.49 
_cell.Z_PDB               192 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HQQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
PISA tetrameric 4 author_and_software_defined_assembly 3 
PISA tetrameric 4 author_and_software_defined_assembly 4 
PISA tetrameric 4 author_and_software_defined_assembly 5 
PISA tetrameric 4 author_and_software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,H,I,J,Y,FA,GA,HA 1 1 
B,C,O,P,Z,AA,MA,NA 2 1 
D,E,F,G,BA,CA,DA,EA 3 1 
K,L,M,N,IA,JA,KA,LA 4 1 
Q,R,S,T,OA,PA,QA,RA 5 1 
U,V,W,X,SA,TA,UA,VA 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
? 2 KA N N 
? 2 LA N N 
? 2 MA N N 
? 2 NA N N 
? 2 OA N N 
? 2 PA N N 
? 2 QA N N 
? 2 RA N N 
? 2 SA N N 
? 2 TA N N 
? 2 UA N N 
? 2 VA N N 
#
_chem_comp.formula           'C6 H14 O12 P2' 
_chem_comp.formula_weight    340.116 
_chem_comp.id                FDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              2,6-di-O-phosphono-beta-D-fructofuranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     FRUCTOSE-2,6-DIPHOSPHATE;2,6-di-O-phosphono-beta-D-fructose;2,6-di-O-phosphono-D-fructose;2,6-di-O-phosphono-fructose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1P FDP doub 83 n n 
P1 O2P FDP sing 84 n n 
P1 O3P FDP sing 85 n n 
P1 O2 FDP sing 86 n n 
O2P HOP2 FDP sing 87 n n 
O3P HOP3 FDP sing 88 n n 
O1 C1 FDP sing 89 n n 
O1 HO1 FDP sing 90 n n 
C1 C2 FDP sing 91 n n 
C1 H11 FDP sing 92 n n 
C1 H12 FDP sing 93 n n 
C2 O2 FDP sing 94 n n 
C2 C3 FDP sing 95 n n 
C2 O5 FDP sing 96 n n 
C3 O3 FDP sing 97 n n 
C3 C4 FDP sing 98 n n 
C3 H3 FDP sing 99 n n 
O3 HO3 FDP sing 100 n n 
C4 O4 FDP sing 101 n n 
C4 C5 FDP sing 102 n n 
C4 H4 FDP sing 103 n n 
O4 HO4 FDP sing 104 n n 
C5 O5 FDP sing 105 n n 
C5 C6 FDP sing 106 n n 
C5 H5 FDP sing 107 n n 
C6 O6 FDP sing 108 n n 
C6 H61 FDP sing 109 n n 
C6 H62 FDP sing 110 n n 
O6 P2 FDP sing 111 n n 
P2 O4P FDP doub 112 n n 
P2 O5P FDP sing 113 n n 
P2 O6P FDP sing 114 n n 
O5P HOP5 FDP sing 115 n n 
O6P HOP6 FDP sing 116 n n 
#
_pdbx_chem_comp_identifier.comp_id            FDP 
_pdbx_chem_comp_identifier.identifier         b-D-Fruf2PO36PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     3HQQ 
_atom_sites.fract_transf_matrix[1][1]    0.004101 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003926 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00112 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Y 2 FDP A 1 700 700 FDP FDP . 
Z 2 FDP B 1 700 700 FDP FDP . 
AA 2 FDP C 1 700 700 FDP FDP . 
BA 2 FDP D 1 700 700 FDP FDP . 
CA 2 FDP E 1 700 700 FDP FDP . 
DA 2 FDP F 1 700 700 FDP FDP . 
EA 2 FDP G 1 700 700 FDP FDP . 
FA 2 FDP H 1 700 700 FDP FDP . 
GA 2 FDP I 1 700 700 FDP FDP . 
HA 2 FDP J 1 700 700 FDP FDP . 
IA 2 FDP K 1 700 700 FDP FDP . 
JA 2 FDP L 1 700 700 FDP FDP . 
KA 2 FDP M 1 700 700 FDP FDP . 
LA 2 FDP N 1 700 700 FDP FDP . 
MA 2 FDP O 1 700 700 FDP FDP . 
NA 2 FDP P 1 700 700 FDP FDP . 
OA 2 FDP Q 1 700 700 FDP FDP . 
PA 2 FDP R 1 700 700 FDP FDP . 
QA 2 FDP S 1 700 700 FDP FDP . 
RA 2 FDP T 1 700 700 FDP FDP . 
SA 2 FDP U 1 700 700 FDP FDP . 
TA 2 FDP V 1 700 700 FDP FDP . 
UA 2 FDP W 1 700 700 FDP FDP . 
VA 2 FDP X 1 700 700 FDP FDP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 FDP . . . OA 2 -8.164 85.974 -211.479 1 35.59 ? P1 FDP 700 Q 1 
HETATM 2 O O1P FDP . . . OA 2 -8.722 85.267 -210.307 1 34.65 ? O1P FDP 700 Q 1 
HETATM 3 O O2P FDP . . . OA 2 -6.824 85.434 -211.888 1 32.81 ? O2P FDP 700 Q 1 
HETATM 4 O O3P FDP . . . OA 2 -9.031 85.979 -212.692 1 34.38 ? O3P FDP 700 Q 1 
HETATM 5 O O1 FDP . . . OA 2 -9.91 88.507 -212.486 1 30.65 ? O1 FDP 700 Q 1 
HETATM 6 C C1 FDP . . . OA 2 -10.019 88.514 -211.089 1 34.39 ? C1 FDP 700 Q 1 
HETATM 7 C C2 FDP . . . OA 2 -8.601 88.467 -210.539 1 34.07 ? C2 FDP 700 Q 1 
HETATM 8 O O2 FDP . . . OA 2 -7.782 87.508 -211.207 1 34.92 ? O2 FDP 700 Q 1 
HETATM 9 C C3 FDP . . . OA 2 -8.668 88.431 -209.04 1 31.51 ? C3 FDP 700 Q 1 
HETATM 10 O O3 FDP . . . OA 2 -8.874 87.104 -208.577 1 30.55 ? O3 FDP 700 Q 1 
HETATM 11 C C4 FDP . . . OA 2 -7.286 88.937 -208.729 1 32.1 ? C4 FDP 700 Q 1 
HETATM 12 O O4 FDP . . . OA 2 -7.236 89.321 -207.417 1 25.76 ? O4 FDP 700 Q 1 
HETATM 13 C C5 FDP . . . OA 2 -7.222 90.124 -209.615 1 31.21 ? C5 FDP 700 Q 1 
HETATM 14 O O5 FDP . . . OA 2 -8.034 89.744 -210.751 1 34.72 ? O5 FDP 700 Q 1 
HETATM 15 C C6 FDP . . . OA 2 -5.783 90.185 -210.101 1 30.08 ? C6 FDP 700 Q 1 
HETATM 16 O O6 FDP . . . OA 2 -5.581 91.285 -211.034 1 32.11 ? O6 FDP 700 Q 1 
HETATM 17 P P2 FDP . . . OA 2 -4.18 91.964 -211.224 1 33.74 ? P2 FDP 700 Q 1 
HETATM 18 O O4P FDP . . . OA 2 -3.503 92.378 -209.963 1 32.56 ? O4P FDP 700 Q 1 
HETATM 19 O O5P FDP . . . OA 2 -3.398 90.953 -211.926 1 32.23 ? O5P FDP 700 Q 1 
HETATM 20 O O6P FDP . . . OA 2 -4.362 93.073 -212.218 1 29.81 ? O6P FDP 700 Q 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    90 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#