data_3HRB # _model_server_result.job_id a1JN-_A1tAONSMhJoAS60w _model_server_result.datetime_utc '2024-10-11 01:26:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hrb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3HRB # _exptl.entry_id 3HRB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[3-amino-2-(2-methylphenyl)-1-oxidopyridin-4-yl](2,4-difluorophenyl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HRB _cell.length_a 45.22 _cell.length_b 86.75 _cell.length_c 122.23 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HRB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H14 F2 N2 O2' _chem_comp.formula_weight 340.323 _chem_comp.id I39 _chem_comp.mon_nstd_flag . _chem_comp.name '[3-amino-2-(2-methylphenyl)-1-oxidopyridin-4-yl](2,4-difluorophenyl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O10 C9 I39 doub 152 n n C9 C4 I39 sing 153 n n C9 C11 I39 sing 154 n n C4 C3 I39 doub 155 n y C4 C5 I39 sing 156 n y C3 F8 I39 sing 157 n n C3 C2 I39 sing 158 n y C2 C1 I39 doub 159 n y C5 C6 I39 doub 160 n y C6 C1 I39 sing 161 n y C1 F7 I39 sing 162 n n C11 C16 I39 doub 163 n y C11 C12 I39 sing 164 n y C16 C15 I39 sing 165 n y C15 N14 I39 doub 166 n y N14 O23 I39 sing 167 n n N14 C13 I39 sing 168 n y C13 C12 I39 doub 169 n y C13 C17 I39 sing 170 n y C12 N24 I39 sing 171 n n C17 C22 I39 doub 172 n y C17 C18 I39 sing 173 n y C22 C25 I39 sing 174 n n C22 C21 I39 sing 175 n y C21 C20 I39 doub 176 n y C20 C19 I39 sing 177 n y C19 C18 I39 doub 178 n y C2 H2 I39 sing 179 n n C5 H5 I39 sing 180 n n C6 H6 I39 sing 181 n n C16 H16 I39 sing 182 n n C15 H15 I39 sing 183 n n N24 HN24 I39 sing 184 n n N24 HN2A I39 sing 185 n n C25 H25 I39 sing 186 n n C25 H25A I39 sing 187 n n C25 H25B I39 sing 188 n n C21 H21 I39 sing 189 n n C20 H20 I39 sing 190 n n C19 H19 I39 sing 191 n n C18 H18 I39 sing 192 n n # _atom_sites.entry_id 3HRB _atom_sites.fract_transf_matrix[1][1] 0.022114 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I39 A 1 1 1 I39 I39 . C 3 HOH A 1 361 361 HOH HOH . C 3 HOH A 2 362 362 HOH HOH . C 3 HOH A 3 363 363 HOH HOH . C 3 HOH A 4 364 364 HOH HOH . C 3 HOH A 5 365 365 HOH HOH . C 3 HOH A 6 366 366 HOH HOH . C 3 HOH A 7 367 367 HOH HOH . C 3 HOH A 8 368 368 HOH HOH . C 3 HOH A 9 369 369 HOH HOH . C 3 HOH A 10 370 370 HOH HOH . C 3 HOH A 11 371 371 HOH HOH . C 3 HOH A 12 372 372 HOH HOH . C 3 HOH A 13 373 373 HOH HOH . C 3 HOH A 14 374 374 HOH HOH . C 3 HOH A 15 375 375 HOH HOH . C 3 HOH A 16 376 376 HOH HOH . C 3 HOH A 17 377 377 HOH HOH . C 3 HOH A 18 378 378 HOH HOH . C 3 HOH A 19 379 379 HOH HOH . C 3 HOH A 20 380 380 HOH HOH . C 3 HOH A 21 381 381 HOH HOH . C 3 HOH A 22 382 382 HOH HOH . C 3 HOH A 23 383 383 HOH HOH . C 3 HOH A 24 384 384 HOH HOH . C 3 HOH A 25 385 385 HOH HOH . C 3 HOH A 26 386 386 HOH HOH . C 3 HOH A 27 387 387 HOH HOH . C 3 HOH A 28 388 388 HOH HOH . C 3 HOH A 29 389 389 HOH HOH . C 3 HOH A 30 390 390 HOH HOH . C 3 HOH A 31 391 391 HOH HOH . C 3 HOH A 32 392 392 HOH HOH . C 3 HOH A 33 393 393 HOH HOH . C 3 HOH A 34 394 394 HOH HOH . C 3 HOH A 35 395 395 HOH HOH . C 3 HOH A 36 396 396 HOH HOH . C 3 HOH A 37 397 397 HOH HOH . C 3 HOH A 38 398 398 HOH HOH . C 3 HOH A 39 399 399 HOH HOH . C 3 HOH A 40 400 400 HOH HOH . C 3 HOH A 41 401 401 HOH HOH . C 3 HOH A 42 402 402 HOH HOH . C 3 HOH A 43 403 403 HOH HOH . C 3 HOH A 44 404 404 HOH HOH . C 3 HOH A 45 405 405 HOH HOH . C 3 HOH A 46 406 406 HOH HOH . C 3 HOH A 47 407 407 HOH HOH . C 3 HOH A 48 408 408 HOH HOH . C 3 HOH A 49 409 409 HOH HOH . C 3 HOH A 50 410 410 HOH HOH . C 3 HOH A 51 411 411 HOH HOH . C 3 HOH A 52 412 412 HOH HOH . C 3 HOH A 53 413 413 HOH HOH . C 3 HOH A 54 414 414 HOH HOH . C 3 HOH A 55 415 415 HOH HOH . C 3 HOH A 56 416 416 HOH HOH . C 3 HOH A 57 417 417 HOH HOH . C 3 HOH A 58 418 418 HOH HOH . C 3 HOH A 59 419 419 HOH HOH . C 3 HOH A 60 420 420 HOH HOH . C 3 HOH A 61 421 421 HOH HOH . C 3 HOH A 62 422 422 HOH HOH . C 3 HOH A 63 423 423 HOH HOH . C 3 HOH A 64 424 424 HOH HOH . C 3 HOH A 65 425 425 HOH HOH . C 3 HOH A 66 426 426 HOH HOH . C 3 HOH A 67 427 427 HOH HOH . C 3 HOH A 68 428 428 HOH HOH . C 3 HOH A 69 429 429 HOH HOH . C 3 HOH A 70 430 430 HOH HOH . C 3 HOH A 71 431 431 HOH HOH . C 3 HOH A 72 432 432 HOH HOH . C 3 HOH A 73 433 433 HOH HOH . C 3 HOH A 74 434 434 HOH HOH . C 3 HOH A 75 435 435 HOH HOH . C 3 HOH A 76 436 436 HOH HOH . C 3 HOH A 77 437 437 HOH HOH . C 3 HOH A 78 438 438 HOH HOH . C 3 HOH A 79 439 439 HOH HOH . C 3 HOH A 80 440 440 HOH HOH . C 3 HOH A 81 441 441 HOH HOH . C 3 HOH A 82 442 442 HOH HOH . C 3 HOH A 83 443 443 HOH HOH . C 3 HOH A 84 444 444 HOH HOH . C 3 HOH A 85 445 445 HOH HOH . C 3 HOH A 86 446 446 HOH HOH . C 3 HOH A 87 447 447 HOH HOH . C 3 HOH A 88 448 448 HOH HOH . C 3 HOH A 89 449 449 HOH HOH . C 3 HOH A 90 450 450 HOH HOH . C 3 HOH A 91 451 451 HOH HOH . C 3 HOH A 92 452 452 HOH HOH . C 3 HOH A 93 453 453 HOH HOH . C 3 HOH A 94 454 454 HOH HOH . C 3 HOH A 95 455 455 HOH HOH . C 3 HOH A 96 456 456 HOH HOH . C 3 HOH A 97 457 457 HOH HOH . C 3 HOH A 98 458 458 HOH HOH . C 3 HOH A 99 459 459 HOH HOH . C 3 HOH A 100 460 460 HOH HOH . C 3 HOH A 101 461 461 HOH HOH . C 3 HOH A 102 462 462 HOH HOH . C 3 HOH A 103 463 463 HOH HOH . C 3 HOH A 104 464 464 HOH HOH . C 3 HOH A 105 465 465 HOH HOH . C 3 HOH A 106 466 466 HOH HOH . C 3 HOH A 107 467 467 HOH HOH . C 3 HOH A 108 468 468 HOH HOH . C 3 HOH A 109 469 469 HOH HOH . C 3 HOH A 110 470 470 HOH HOH . C 3 HOH A 111 471 471 HOH HOH . C 3 HOH A 112 472 472 HOH HOH . C 3 HOH A 113 473 473 HOH HOH . C 3 HOH A 114 474 474 HOH HOH . C 3 HOH A 115 475 475 HOH HOH . C 3 HOH A 116 476 476 HOH HOH . C 3 HOH A 117 477 477 HOH HOH . C 3 HOH A 118 478 478 HOH HOH . C 3 HOH A 119 479 479 HOH HOH . C 3 HOH A 120 480 480 HOH HOH . C 3 HOH A 121 481 481 HOH HOH . C 3 HOH A 122 482 482 HOH HOH . C 3 HOH A 123 483 483 HOH HOH . C 3 HOH A 124 484 484 HOH HOH . C 3 HOH A 125 485 485 HOH HOH . C 3 HOH A 126 486 486 HOH HOH . C 3 HOH A 127 487 487 HOH HOH . C 3 HOH A 128 488 488 HOH HOH . C 3 HOH A 129 489 489 HOH HOH . C 3 HOH A 130 490 490 HOH HOH . C 3 HOH A 131 491 491 HOH HOH . C 3 HOH A 132 492 492 HOH HOH . C 3 HOH A 133 493 493 HOH HOH . C 3 HOH A 134 494 494 HOH HOH . C 3 HOH A 135 495 495 HOH HOH . C 3 HOH A 136 496 496 HOH HOH . C 3 HOH A 137 497 497 HOH HOH . C 3 HOH A 138 498 498 HOH HOH . C 3 HOH A 139 499 499 HOH HOH . C 3 HOH A 140 500 500 HOH HOH . C 3 HOH A 141 501 501 HOH HOH . C 3 HOH A 142 502 502 HOH HOH . C 3 HOH A 143 503 503 HOH HOH . C 3 HOH A 144 504 504 HOH HOH . C 3 HOH A 145 505 505 HOH HOH . C 3 HOH A 146 506 506 HOH HOH . C 3 HOH A 147 507 507 HOH HOH . C 3 HOH A 148 508 508 HOH HOH . C 3 HOH A 149 509 509 HOH HOH . C 3 HOH A 150 510 510 HOH HOH . C 3 HOH A 151 511 511 HOH HOH . C 3 HOH A 152 512 512 HOH HOH . C 3 HOH A 153 513 513 HOH HOH . C 3 HOH A 154 514 514 HOH HOH . C 3 HOH A 155 515 515 HOH HOH . C 3 HOH A 156 516 516 HOH HOH . C 3 HOH A 157 517 517 HOH HOH . C 3 HOH A 158 518 518 HOH HOH . C 3 HOH A 159 519 519 HOH HOH . C 3 HOH A 160 520 520 HOH HOH . C 3 HOH A 161 521 521 HOH HOH . C 3 HOH A 162 522 522 HOH HOH . C 3 HOH A 163 523 523 HOH HOH . C 3 HOH A 164 524 524 HOH HOH . C 3 HOH A 165 525 525 HOH HOH . C 3 HOH A 166 526 526 HOH HOH . C 3 HOH A 167 527 527 HOH HOH . C 3 HOH A 168 528 528 HOH HOH . C 3 HOH A 169 529 529 HOH HOH . C 3 HOH A 170 530 530 HOH HOH . C 3 HOH A 171 531 531 HOH HOH . C 3 HOH A 172 532 532 HOH HOH . C 3 HOH A 173 533 533 HOH HOH . C 3 HOH A 174 534 534 HOH HOH . C 3 HOH A 175 535 535 HOH HOH . C 3 HOH A 176 536 536 HOH HOH . C 3 HOH A 177 537 537 HOH HOH . C 3 HOH A 178 538 538 HOH HOH . C 3 HOH A 179 539 539 HOH HOH . C 3 HOH A 180 540 540 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O10 I39 . . . B 2 2.214 29.777 31.67 1 28.16 ? O10 I39 1 A 1 HETATM 2 C C9 I39 . . . B 2 2.716 30.843 31.337 1 28.96 ? C9 I39 1 A 1 HETATM 3 C C4 I39 . . . B 2 4.197 30.94 31.104 1 27.91 ? C4 I39 1 A 1 HETATM 4 C C3 I39 . . . B 2 4.984 31.64 32.003 1 28.83 ? C3 I39 1 A 1 HETATM 5 F F8 I39 . . . B 2 4.439 32.231 33.077 1 29.69 ? F8 I39 1 A 1 HETATM 6 C C2 I39 . . . B 2 6.356 31.736 31.816 1 29.51 ? C2 I39 1 A 1 HETATM 7 C C5 I39 . . . B 2 4.79 30.337 30.005 1 27.64 ? C5 I39 1 A 1 HETATM 8 C C6 I39 . . . B 2 6.166 30.433 29.81 1 27.53 ? C6 I39 1 A 1 HETATM 9 C C1 I39 . . . B 2 6.949 31.135 30.72 1 29.43 ? C1 I39 1 A 1 HETATM 10 F F7 I39 . . . B 2 8.277 31.268 30.565 1 31.25 ? F7 I39 1 A 1 HETATM 11 C C11 I39 . . . B 2 1.841 32.054 31.162 1 28.72 ? C11 I39 1 A 1 HETATM 12 C C16 I39 . . . B 2 2.357 33.139 30.488 1 28.14 ? C16 I39 1 A 1 HETATM 13 C C15 I39 . . . B 2 1.581 34.271 30.303 1 26.8 ? C15 I39 1 A 1 HETATM 14 N N14 I39 . . . B 2 0.343 34.318 30.739 1 27 ? N14 I39 1 A 1 HETATM 15 O O23 I39 . . . B 2 -0.395 35.513 30.499 1 30.2 ? O23 I39 1 A 1 HETATM 16 C C13 I39 . . . B 2 -0.217 33.28 31.382 1 29.03 ? C13 I39 1 A 1 HETATM 17 C C12 I39 . . . B 2 0.517 32.125 31.619 1 28.29 ? C12 I39 1 A 1 HETATM 18 N N24 I39 . . . B 2 -0.06 31.081 32.276 1 26.87 ? N24 I39 1 A 1 HETATM 19 C C17 I39 . . . B 2 -1.625 33.365 31.876 1 31.98 ? C17 I39 1 A 1 HETATM 20 C C22 I39 . . . B 2 -2.707 32.942 31.1 1 32.82 ? C22 I39 1 A 1 HETATM 21 C C25 I39 . . . B 2 -2.525 32.392 29.706 1 32.13 ? C25 I39 1 A 1 HETATM 22 C C21 I39 . . . B 2 -3.999 33.026 31.612 1 33.71 ? C21 I39 1 A 1 HETATM 23 C C20 I39 . . . B 2 -4.211 33.516 32.898 1 35.03 ? C20 I39 1 A 1 HETATM 24 C C19 I39 . . . B 2 -3.13 33.938 33.676 1 34.78 ? C19 I39 1 A 1 HETATM 25 C C18 I39 . . . B 2 -1.839 33.86 33.159 1 33.76 ? C18 I39 1 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #