data_3HSR # _model_server_result.job_id 7UW7IVjVUPVKGAD0qbJ1Bg _model_server_result.datetime_utc '2024-11-20 04:24:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hsr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 3HSR # _exptl.entry_id 3HSR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 110.177 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description benzenethiol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 64.4 _cell.angle_beta 75.81 _cell.angle_gamma 82.58 _cell.entry_id 3HSR _cell.length_a 38.24 _cell.length_b 62.84 _cell.length_c 67.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HSR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1 C,D,K,L,M,N,O,P,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 K N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E S1 BT6 . A BT6 1 1_555 B SG CYS 11 B CYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? covale ? covale2 K S1 BT6 . C BT6 1 1_555 C SG CYS 11 C CYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? covale ? covale3 N S1 BT6 . D BT6 1 1_555 D SG CYS 11 D CYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C6 H6 S' _chem_comp.formula_weight 110.177 _chem_comp.id BT6 _chem_comp.mon_nstd_flag . _chem_comp.name benzenethiol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 BT6 sing 76 n n C1 C6 BT6 doub 77 n y C1 C2 BT6 sing 78 n y C6 C5 BT6 sing 79 n y C5 C4 BT6 doub 80 n y C4 C3 BT6 sing 81 n y C3 C2 BT6 doub 82 n y S1 HS1 BT6 sing 83 n n C6 H6 BT6 sing 84 n n C5 H5 BT6 sing 85 n n C4 H4 BT6 sing 86 n n C3 H3 BT6 sing 87 n n C2 H2 BT6 sing 88 n n # _atom_sites.entry_id 3HSR _atom_sites.fract_transf_matrix[1][1] 0.026151 _atom_sites.fract_transf_matrix[1][2] -0.003406 _atom_sites.fract_transf_matrix[1][3] -0.005713 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016048 _atom_sites.fract_transf_matrix[2][3] -0.007352 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016884 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BT6 A 1 1 1 BT6 BT6 . F 3 ACT A 1 143 143 ACT ACT . G 4 GOL A 1 144 144 GOL GOL . H 3 ACT B 1 1 1 ACT ACT . I 4 GOL B 1 143 143 GOL GOL . J 4 GOL B 1 144 144 GOL GOL . K 2 BT6 C 1 1 1 BT6 BT6 . L 3 ACT C 1 143 143 ACT ACT . M 4 GOL C 1 144 144 GOL GOL . N 2 BT6 D 1 1 1 BT6 BT6 . O 3 ACT D 1 143 143 ACT ACT . P 4 GOL D 1 144 144 GOL GOL . Q 5 HOH A 1 145 145 HOH HOH . Q 5 HOH A 2 146 146 HOH HOH . Q 5 HOH A 3 147 147 HOH HOH . Q 5 HOH A 4 148 148 HOH HOH . Q 5 HOH A 5 149 149 HOH HOH . Q 5 HOH A 6 150 150 HOH HOH . Q 5 HOH A 7 151 151 HOH HOH . Q 5 HOH A 8 152 152 HOH HOH . Q 5 HOH A 9 153 153 HOH HOH . Q 5 HOH A 10 154 154 HOH HOH . Q 5 HOH A 11 155 155 HOH HOH . Q 5 HOH A 12 156 156 HOH HOH . Q 5 HOH A 13 157 157 HOH HOH . Q 5 HOH A 14 158 158 HOH HOH . Q 5 HOH A 15 159 159 HOH HOH . Q 5 HOH A 16 160 160 HOH HOH . Q 5 HOH A 17 161 161 HOH HOH . Q 5 HOH A 18 162 162 HOH HOH . Q 5 HOH A 19 163 163 HOH HOH . Q 5 HOH A 20 164 164 HOH HOH . Q 5 HOH A 21 165 165 HOH HOH . Q 5 HOH A 22 166 166 HOH HOH . Q 5 HOH A 23 167 167 HOH HOH . Q 5 HOH A 24 172 172 HOH HOH . Q 5 HOH A 25 178 178 HOH HOH . Q 5 HOH A 26 179 179 HOH HOH . Q 5 HOH A 27 186 186 HOH HOH . Q 5 HOH A 28 188 188 HOH HOH . Q 5 HOH A 29 197 197 HOH HOH . Q 5 HOH A 30 200 200 HOH HOH . Q 5 HOH A 31 207 207 HOH HOH . Q 5 HOH A 32 212 212 HOH HOH . Q 5 HOH A 33 244 244 HOH HOH . Q 5 HOH A 34 248 248 HOH HOH . Q 5 HOH A 35 267 267 HOH HOH . Q 5 HOH A 36 275 275 HOH HOH . Q 5 HOH A 37 276 276 HOH HOH . Q 5 HOH A 38 277 277 HOH HOH . Q 5 HOH A 39 278 278 HOH HOH . Q 5 HOH A 40 279 279 HOH HOH . Q 5 HOH A 41 281 281 HOH HOH . R 5 HOH B 1 145 145 HOH HOH . R 5 HOH B 2 146 146 HOH HOH . R 5 HOH B 3 147 147 HOH HOH . R 5 HOH B 4 148 148 HOH HOH . R 5 HOH B 5 149 149 HOH HOH . R 5 HOH B 6 150 150 HOH HOH . R 5 HOH B 7 151 151 HOH HOH . R 5 HOH B 8 152 152 HOH HOH . R 5 HOH B 9 153 153 HOH HOH . R 5 HOH B 10 154 154 HOH HOH . R 5 HOH B 11 155 155 HOH HOH . R 5 HOH B 12 156 156 HOH HOH . R 5 HOH B 13 157 157 HOH HOH . R 5 HOH B 14 158 158 HOH HOH . R 5 HOH B 15 159 159 HOH HOH . R 5 HOH B 16 160 160 HOH HOH . R 5 HOH B 17 161 161 HOH HOH . R 5 HOH B 18 162 162 HOH HOH . R 5 HOH B 19 163 163 HOH HOH . R 5 HOH B 20 164 164 HOH HOH . R 5 HOH B 21 165 165 HOH HOH . R 5 HOH B 22 166 166 HOH HOH . R 5 HOH B 23 167 167 HOH HOH . R 5 HOH B 24 168 168 HOH HOH . R 5 HOH B 25 169 169 HOH HOH . R 5 HOH B 26 170 170 HOH HOH . R 5 HOH B 27 171 171 HOH HOH . R 5 HOH B 28 172 172 HOH HOH . R 5 HOH B 29 173 173 HOH HOH . R 5 HOH B 30 174 174 HOH HOH . R 5 HOH B 31 185 185 HOH HOH . R 5 HOH B 32 189 189 HOH HOH . R 5 HOH B 33 193 193 HOH HOH . R 5 HOH B 34 194 194 HOH HOH . R 5 HOH B 35 205 205 HOH HOH . R 5 HOH B 36 209 209 HOH HOH . R 5 HOH B 37 218 218 HOH HOH . R 5 HOH B 38 219 219 HOH HOH . R 5 HOH B 39 223 223 HOH HOH . R 5 HOH B 40 227 227 HOH HOH . R 5 HOH B 41 230 230 HOH HOH . R 5 HOH B 42 242 242 HOH HOH . R 5 HOH B 43 250 250 HOH HOH . R 5 HOH B 44 252 252 HOH HOH . R 5 HOH B 45 265 265 HOH HOH . R 5 HOH B 46 266 266 HOH HOH . R 5 HOH B 47 270 270 HOH HOH . R 5 HOH B 48 271 271 HOH HOH . R 5 HOH B 49 272 272 HOH HOH . R 5 HOH B 50 273 273 HOH HOH . R 5 HOH B 51 274 274 HOH HOH . R 5 HOH B 52 282 282 HOH HOH . R 5 HOH B 53 283 283 HOH HOH . S 5 HOH C 1 145 145 HOH HOH . S 5 HOH C 2 146 146 HOH HOH . S 5 HOH C 3 147 147 HOH HOH . S 5 HOH C 4 148 148 HOH HOH . S 5 HOH C 5 149 149 HOH HOH . S 5 HOH C 6 150 150 HOH HOH . S 5 HOH C 7 151 151 HOH HOH . S 5 HOH C 8 152 152 HOH HOH . S 5 HOH C 9 153 153 HOH HOH . S 5 HOH C 10 154 154 HOH HOH . S 5 HOH C 11 155 155 HOH HOH . S 5 HOH C 12 156 156 HOH HOH . S 5 HOH C 13 157 157 HOH HOH . S 5 HOH C 14 158 158 HOH HOH . S 5 HOH C 15 159 159 HOH HOH . S 5 HOH C 16 160 160 HOH HOH . S 5 HOH C 17 161 161 HOH HOH . S 5 HOH C 18 162 162 HOH HOH . S 5 HOH C 19 163 163 HOH HOH . S 5 HOH C 20 164 164 HOH HOH . S 5 HOH C 21 165 165 HOH HOH . S 5 HOH C 22 166 166 HOH HOH . S 5 HOH C 23 167 167 HOH HOH . S 5 HOH C 24 168 168 HOH HOH . S 5 HOH C 25 169 169 HOH HOH . S 5 HOH C 26 170 170 HOH HOH . S 5 HOH C 27 171 171 HOH HOH . S 5 HOH C 28 173 173 HOH HOH . S 5 HOH C 29 174 174 HOH HOH . S 5 HOH C 30 175 175 HOH HOH . S 5 HOH C 31 176 176 HOH HOH . S 5 HOH C 32 182 182 HOH HOH . S 5 HOH C 33 191 191 HOH HOH . S 5 HOH C 34 195 195 HOH HOH . S 5 HOH C 35 196 196 HOH HOH . S 5 HOH C 36 231 231 HOH HOH . S 5 HOH C 37 236 236 HOH HOH . S 5 HOH C 38 249 249 HOH HOH . S 5 HOH C 39 253 253 HOH HOH . S 5 HOH C 40 254 254 HOH HOH . S 5 HOH C 41 255 255 HOH HOH . S 5 HOH C 42 256 256 HOH HOH . S 5 HOH C 43 258 258 HOH HOH . S 5 HOH C 44 259 259 HOH HOH . S 5 HOH C 45 260 260 HOH HOH . S 5 HOH C 46 284 284 HOH HOH . S 5 HOH C 47 285 285 HOH HOH . T 5 HOH D 1 145 145 HOH HOH . T 5 HOH D 2 146 146 HOH HOH . T 5 HOH D 3 148 148 HOH HOH . T 5 HOH D 4 149 149 HOH HOH . T 5 HOH D 5 150 150 HOH HOH . T 5 HOH D 6 151 151 HOH HOH . T 5 HOH D 7 152 152 HOH HOH . T 5 HOH D 8 153 153 HOH HOH . T 5 HOH D 9 154 154 HOH HOH . T 5 HOH D 10 155 155 HOH HOH . T 5 HOH D 11 156 156 HOH HOH . T 5 HOH D 12 157 157 HOH HOH . T 5 HOH D 13 158 158 HOH HOH . T 5 HOH D 14 159 159 HOH HOH . T 5 HOH D 15 160 160 HOH HOH . T 5 HOH D 16 161 161 HOH HOH . T 5 HOH D 17 162 162 HOH HOH . T 5 HOH D 18 163 163 HOH HOH . T 5 HOH D 19 164 164 HOH HOH . T 5 HOH D 20 165 165 HOH HOH . T 5 HOH D 21 166 166 HOH HOH . T 5 HOH D 22 167 167 HOH HOH . T 5 HOH D 23 168 168 HOH HOH . T 5 HOH D 24 169 169 HOH HOH . T 5 HOH D 25 170 170 HOH HOH . T 5 HOH D 26 177 177 HOH HOH . T 5 HOH D 27 180 180 HOH HOH . T 5 HOH D 28 181 181 HOH HOH . T 5 HOH D 29 192 192 HOH HOH . T 5 HOH D 30 208 208 HOH HOH . T 5 HOH D 31 220 220 HOH HOH . T 5 HOH D 32 221 221 HOH HOH . T 5 HOH D 33 226 226 HOH HOH . T 5 HOH D 34 229 229 HOH HOH . T 5 HOH D 35 233 233 HOH HOH . T 5 HOH D 36 240 240 HOH HOH . T 5 HOH D 37 241 241 HOH HOH . T 5 HOH D 38 251 251 HOH HOH . T 5 HOH D 39 261 261 HOH HOH . T 5 HOH D 40 262 262 HOH HOH . T 5 HOH D 41 263 263 HOH HOH . T 5 HOH D 42 268 268 HOH HOH . T 5 HOH D 43 286 286 HOH HOH . T 5 HOH D 44 287 287 HOH HOH . T 5 HOH D 45 288 288 HOH HOH . T 5 HOH D 46 290 290 HOH HOH . T 5 HOH D 47 291 291 HOH HOH . T 5 HOH D 48 292 292 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 BT6 . . . E 2 -9.35 3.945 0.343 1 50.4 ? S1 BT6 1 A 1 HETATM 2 C C1 BT6 . . . E 2 -9.234 2.522 -0.646 1 47.06 ? C1 BT6 1 A 1 HETATM 3 C C6 BT6 . . . E 2 -10.274 2.14 -1.494 1 47.61 ? C6 BT6 1 A 1 HETATM 4 C C5 BT6 . . . E 2 -10.155 0.979 -2.265 1 49.09 ? C5 BT6 1 A 1 HETATM 5 C C4 BT6 . . . E 2 -8.992 0.199 -2.19 1 48.58 ? C4 BT6 1 A 1 HETATM 6 C C3 BT6 . . . E 2 -7.953 0.589 -1.342 1 48.83 ? C3 BT6 1 A 1 HETATM 7 C C2 BT6 . . . E 2 -8.08 1.744 -0.573 1 49.03 ? C2 BT6 1 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #