data_3HTD # _model_server_result.job_id 86SPS4miSUx3976RyKIMkQ _model_server_result.datetime_utc '2024-11-27 09:55:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3htd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":168}' # _entry.id 3HTD # _exptl.entry_id 3HTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HTD _cell.length_a 60.26 _cell.length_b 60.26 _cell.length_c 96.94 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 3HTD _atom_sites.fract_transf_matrix[1][1] 0.016595 _atom_sites.fract_transf_matrix[1][2] 0.009581 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 165 1 PO4 PO4 . C 3 JZ5 A 1 166 1 JZ5 JZ5 . D 4 BME A 1 167 1 BME BME . E 4 BME A 1 168 1 BME BME . F 5 HOH A 1 169 169 HOH HOH . F 5 HOH A 2 170 170 HOH HOH . F 5 HOH A 3 171 171 HOH HOH . F 5 HOH A 4 172 1 HOH HOH . F 5 HOH A 5 173 2 HOH HOH . F 5 HOH A 6 174 3 HOH HOH . F 5 HOH A 7 175 4 HOH HOH . F 5 HOH A 8 176 5 HOH HOH . F 5 HOH A 9 177 6 HOH HOH . F 5 HOH A 10 178 178 HOH HOH . F 5 HOH A 11 179 179 HOH HOH . F 5 HOH A 12 180 7 HOH HOH . F 5 HOH A 13 181 181 HOH HOH . F 5 HOH A 14 182 182 HOH HOH . F 5 HOH A 15 183 183 HOH HOH . F 5 HOH A 16 184 184 HOH HOH . F 5 HOH A 17 185 185 HOH HOH . F 5 HOH A 18 186 186 HOH HOH . F 5 HOH A 19 187 187 HOH HOH . F 5 HOH A 20 188 188 HOH HOH . F 5 HOH A 21 189 189 HOH HOH . F 5 HOH A 22 190 190 HOH HOH . F 5 HOH A 23 191 191 HOH HOH . F 5 HOH A 24 192 8 HOH HOH . F 5 HOH A 25 193 193 HOH HOH . F 5 HOH A 26 194 194 HOH HOH . F 5 HOH A 27 195 195 HOH HOH . F 5 HOH A 28 196 196 HOH HOH . F 5 HOH A 29 197 197 HOH HOH . F 5 HOH A 30 198 198 HOH HOH . F 5 HOH A 31 199 199 HOH HOH . F 5 HOH A 32 200 200 HOH HOH . F 5 HOH A 33 201 9 HOH HOH . F 5 HOH A 34 202 202 HOH HOH . F 5 HOH A 35 203 203 HOH HOH . F 5 HOH A 36 204 204 HOH HOH . F 5 HOH A 37 205 205 HOH HOH . F 5 HOH A 38 206 206 HOH HOH . F 5 HOH A 39 207 207 HOH HOH . F 5 HOH A 40 208 208 HOH HOH . F 5 HOH A 41 209 209 HOH HOH . F 5 HOH A 42 210 210 HOH HOH . F 5 HOH A 43 211 211 HOH HOH . F 5 HOH A 44 212 212 HOH HOH . F 5 HOH A 45 213 10 HOH HOH . F 5 HOH A 46 214 214 HOH HOH . F 5 HOH A 47 215 215 HOH HOH . F 5 HOH A 48 216 216 HOH HOH . F 5 HOH A 49 217 217 HOH HOH . F 5 HOH A 50 218 218 HOH HOH . F 5 HOH A 51 219 219 HOH HOH . F 5 HOH A 52 220 220 HOH HOH . F 5 HOH A 53 221 221 HOH HOH . F 5 HOH A 54 222 222 HOH HOH . F 5 HOH A 55 223 223 HOH HOH . F 5 HOH A 56 224 224 HOH HOH . F 5 HOH A 57 225 11 HOH HOH . F 5 HOH A 58 226 12 HOH HOH . F 5 HOH A 59 227 227 HOH HOH . F 5 HOH A 60 228 228 HOH HOH . F 5 HOH A 61 229 229 HOH HOH . F 5 HOH A 62 230 230 HOH HOH . F 5 HOH A 63 231 231 HOH HOH . F 5 HOH A 64 232 232 HOH HOH . F 5 HOH A 65 233 233 HOH HOH . F 5 HOH A 66 234 234 HOH HOH . F 5 HOH A 67 235 235 HOH HOH . F 5 HOH A 68 236 236 HOH HOH . F 5 HOH A 69 237 237 HOH HOH . F 5 HOH A 70 238 238 HOH HOH . F 5 HOH A 71 239 239 HOH HOH . F 5 HOH A 72 240 240 HOH HOH . F 5 HOH A 73 241 241 HOH HOH . F 5 HOH A 74 242 13 HOH HOH . F 5 HOH A 75 243 243 HOH HOH . F 5 HOH A 76 244 244 HOH HOH . F 5 HOH A 77 245 245 HOH HOH . F 5 HOH A 78 246 14 HOH HOH . F 5 HOH A 79 247 247 HOH HOH . F 5 HOH A 80 248 248 HOH HOH . F 5 HOH A 81 249 15 HOH HOH . F 5 HOH A 82 250 250 HOH HOH . F 5 HOH A 83 251 251 HOH HOH . F 5 HOH A 84 252 252 HOH HOH . F 5 HOH A 85 253 253 HOH HOH . F 5 HOH A 86 254 254 HOH HOH . F 5 HOH A 87 255 255 HOH HOH . F 5 HOH A 88 256 256 HOH HOH . F 5 HOH A 89 257 257 HOH HOH . F 5 HOH A 90 258 258 HOH HOH . F 5 HOH A 91 259 259 HOH HOH . F 5 HOH A 92 260 260 HOH HOH . F 5 HOH A 93 261 261 HOH HOH . F 5 HOH A 94 262 262 HOH HOH . F 5 HOH A 95 263 16 HOH HOH . F 5 HOH A 96 264 264 HOH HOH . F 5 HOH A 97 265 265 HOH HOH . F 5 HOH A 98 266 266 HOH HOH . F 5 HOH A 99 267 267 HOH HOH . F 5 HOH A 100 268 268 HOH HOH . F 5 HOH A 101 269 269 HOH HOH . F 5 HOH A 102 270 270 HOH HOH . F 5 HOH A 103 271 271 HOH HOH . F 5 HOH A 104 272 272 HOH HOH . F 5 HOH A 105 273 273 HOH HOH . F 5 HOH A 106 274 274 HOH HOH . F 5 HOH A 107 275 17 HOH HOH . F 5 HOH A 108 276 276 HOH HOH . F 5 HOH A 109 277 277 HOH HOH . F 5 HOH A 110 278 278 HOH HOH . F 5 HOH A 111 279 279 HOH HOH . F 5 HOH A 112 280 280 HOH HOH . F 5 HOH A 113 281 281 HOH HOH . F 5 HOH A 114 282 282 HOH HOH . F 5 HOH A 115 283 283 HOH HOH . F 5 HOH A 116 284 284 HOH HOH . F 5 HOH A 117 285 285 HOH HOH . F 5 HOH A 118 286 286 HOH HOH . F 5 HOH A 119 287 287 HOH HOH . F 5 HOH A 120 288 288 HOH HOH . F 5 HOH A 121 289 289 HOH HOH . F 5 HOH A 122 290 290 HOH HOH . F 5 HOH A 123 291 291 HOH HOH . F 5 HOH A 124 292 292 HOH HOH . F 5 HOH A 125 293 293 HOH HOH . F 5 HOH A 126 294 294 HOH HOH . F 5 HOH A 127 295 295 HOH HOH . F 5 HOH A 128 296 296 HOH HOH . F 5 HOH A 129 297 297 HOH HOH . F 5 HOH A 130 298 298 HOH HOH . F 5 HOH A 131 299 299 HOH HOH . F 5 HOH A 132 300 300 HOH HOH . F 5 HOH A 133 301 301 HOH HOH . F 5 HOH A 134 302 302 HOH HOH . F 5 HOH A 135 303 303 HOH HOH . F 5 HOH A 136 304 304 HOH HOH . F 5 HOH A 137 305 305 HOH HOH . F 5 HOH A 138 306 306 HOH HOH . F 5 HOH A 139 307 307 HOH HOH . F 5 HOH A 140 308 308 HOH HOH . F 5 HOH A 141 309 309 HOH HOH . F 5 HOH A 142 310 310 HOH HOH . F 5 HOH A 143 311 311 HOH HOH . F 5 HOH A 144 312 312 HOH HOH . F 5 HOH A 145 313 313 HOH HOH . F 5 HOH A 146 314 314 HOH HOH . F 5 HOH A 147 315 315 HOH HOH . F 5 HOH A 148 316 18 HOH HOH . F 5 HOH A 149 317 317 HOH HOH . F 5 HOH A 150 318 318 HOH HOH . F 5 HOH A 151 319 319 HOH HOH . F 5 HOH A 152 320 320 HOH HOH . F 5 HOH A 153 321 321 HOH HOH . F 5 HOH A 154 322 322 HOH HOH . F 5 HOH A 155 323 323 HOH HOH . F 5 HOH A 156 324 324 HOH HOH . F 5 HOH A 157 325 325 HOH HOH . F 5 HOH A 158 326 326 HOH HOH . F 5 HOH A 159 327 327 HOH HOH . F 5 HOH A 160 328 328 HOH HOH . F 5 HOH A 161 329 19 HOH HOH . F 5 HOH A 162 330 330 HOH HOH . F 5 HOH A 163 331 331 HOH HOH . F 5 HOH A 164 332 332 HOH HOH . F 5 HOH A 165 333 333 HOH HOH . F 5 HOH A 166 334 334 HOH HOH . F 5 HOH A 167 335 335 HOH HOH . F 5 HOH A 168 336 336 HOH HOH . F 5 HOH A 169 337 337 HOH HOH . F 5 HOH A 170 338 338 HOH HOH . F 5 HOH A 171 339 339 HOH HOH . F 5 HOH A 172 340 340 HOH HOH . F 5 HOH A 173 341 341 HOH HOH . F 5 HOH A 174 342 342 HOH HOH . F 5 HOH A 175 343 343 HOH HOH . F 5 HOH A 176 344 344 HOH HOH . F 5 HOH A 177 345 345 HOH HOH . F 5 HOH A 178 346 346 HOH HOH . F 5 HOH A 179 347 347 HOH HOH . F 5 HOH A 180 348 348 HOH HOH . F 5 HOH A 181 349 349 HOH HOH . F 5 HOH A 182 350 350 HOH HOH . F 5 HOH A 183 351 351 HOH HOH . F 5 HOH A 184 352 352 HOH HOH . F 5 HOH A 185 353 353 HOH HOH . F 5 HOH A 186 354 354 HOH HOH . F 5 HOH A 187 355 355 HOH HOH . F 5 HOH A 188 356 356 HOH HOH . F 5 HOH A 189 357 357 HOH HOH . F 5 HOH A 190 358 358 HOH HOH . F 5 HOH A 191 359 359 HOH HOH . F 5 HOH A 192 360 360 HOH HOH . F 5 HOH A 193 361 361 HOH HOH . F 5 HOH A 194 362 362 HOH HOH . F 5 HOH A 195 363 363 HOH HOH . F 5 HOH A 196 364 364 HOH HOH . F 5 HOH A 197 365 365 HOH HOH . F 5 HOH A 198 366 366 HOH HOH . F 5 HOH A 199 367 367 HOH HOH . F 5 HOH A 200 368 368 HOH HOH . F 5 HOH A 201 369 369 HOH HOH . F 5 HOH A 202 370 370 HOH HOH . F 5 HOH A 203 371 371 HOH HOH . F 5 HOH A 204 372 372 HOH HOH . F 5 HOH A 205 373 373 HOH HOH . F 5 HOH A 206 374 374 HOH HOH . F 5 HOH A 207 375 375 HOH HOH . F 5 HOH A 208 376 376 HOH HOH . F 5 HOH A 209 377 20 HOH HOH . F 5 HOH A 210 378 21 HOH HOH . F 5 HOH A 211 379 22 HOH HOH . F 5 HOH A 212 380 23 HOH HOH . F 5 HOH A 213 381 24 HOH HOH . F 5 HOH A 214 382 25 HOH HOH . F 5 HOH A 215 383 26 HOH HOH . F 5 HOH A 216 384 27 HOH HOH . F 5 HOH A 217 385 28 HOH HOH . F 5 HOH A 218 386 29 HOH HOH . F 5 HOH A 219 387 30 HOH HOH . F 5 HOH A 220 388 31 HOH HOH . F 5 HOH A 221 389 32 HOH HOH . F 5 HOH A 222 390 33 HOH HOH . F 5 HOH A 223 391 34 HOH HOH . F 5 HOH A 224 392 35 HOH HOH . F 5 HOH A 225 393 36 HOH HOH . F 5 HOH A 226 394 37 HOH HOH . F 5 HOH A 227 395 38 HOH HOH . F 5 HOH A 228 396 39 HOH HOH . F 5 HOH A 229 397 40 HOH HOH . F 5 HOH A 230 398 41 HOH HOH . F 5 HOH A 231 399 42 HOH HOH . F 5 HOH A 232 400 43 HOH HOH . F 5 HOH A 233 401 44 HOH HOH . F 5 HOH A 234 402 45 HOH HOH . F 5 HOH A 235 403 46 HOH HOH . F 5 HOH A 236 404 47 HOH HOH . F 5 HOH A 237 405 48 HOH HOH . F 5 HOH A 238 406 49 HOH HOH . F 5 HOH A 239 407 50 HOH HOH . F 5 HOH A 240 408 51 HOH HOH . F 5 HOH A 241 409 52 HOH HOH . F 5 HOH A 242 410 53 HOH HOH . F 5 HOH A 243 411 54 HOH HOH . F 5 HOH A 244 412 55 HOH HOH . F 5 HOH A 245 413 56 HOH HOH . F 5 HOH A 246 414 57 HOH HOH . F 5 HOH A 247 415 58 HOH HOH . F 5 HOH A 248 416 59 HOH HOH . F 5 HOH A 249 417 60 HOH HOH . F 5 HOH A 250 418 61 HOH HOH . F 5 HOH A 251 419 62 HOH HOH . F 5 HOH A 252 420 63 HOH HOH . F 5 HOH A 253 421 64 HOH HOH . F 5 HOH A 254 422 66 HOH HOH . F 5 HOH A 255 423 67 HOH HOH . F 5 HOH A 256 424 68 HOH HOH . F 5 HOH A 257 425 69 HOH HOH . F 5 HOH A 258 426 70 HOH HOH . F 5 HOH A 259 427 71 HOH HOH . F 5 HOH A 260 428 72 HOH HOH . F 5 HOH A 261 429 73 HOH HOH . F 5 HOH A 262 430 74 HOH HOH . F 5 HOH A 263 431 75 HOH HOH . F 5 HOH A 264 432 76 HOH HOH . F 5 HOH A 265 433 77 HOH HOH . F 5 HOH A 266 434 78 HOH HOH . F 5 HOH A 267 435 79 HOH HOH . F 5 HOH A 268 436 81 HOH HOH . F 5 HOH A 269 437 82 HOH HOH . F 5 HOH A 270 438 83 HOH HOH . F 5 HOH A 271 439 84 HOH HOH . F 5 HOH A 272 440 85 HOH HOH . F 5 HOH A 273 441 86 HOH HOH . F 5 HOH A 274 442 87 HOH HOH . F 5 HOH A 275 443 88 HOH HOH . F 5 HOH A 276 444 89 HOH HOH . F 5 HOH A 277 445 90 HOH HOH . F 5 HOH A 278 446 91 HOH HOH . F 5 HOH A 279 447 92 HOH HOH . F 5 HOH A 280 448 93 HOH HOH . F 5 HOH A 281 449 94 HOH HOH . F 5 HOH A 282 450 95 HOH HOH . F 5 HOH A 283 451 96 HOH HOH . F 5 HOH A 284 452 97 HOH HOH . F 5 HOH A 285 453 98 HOH HOH . F 5 HOH A 286 454 99 HOH HOH . F 5 HOH A 287 455 100 HOH HOH . F 5 HOH A 288 456 101 HOH HOH . F 5 HOH A 289 457 102 HOH HOH . F 5 HOH A 290 458 103 HOH HOH . F 5 HOH A 291 459 104 HOH HOH . F 5 HOH A 292 460 106 HOH HOH . F 5 HOH A 293 461 107 HOH HOH . F 5 HOH A 294 462 108 HOH HOH . F 5 HOH A 295 463 109 HOH HOH . F 5 HOH A 296 464 111 HOH HOH . F 5 HOH A 297 465 112 HOH HOH . F 5 HOH A 298 466 113 HOH HOH . F 5 HOH A 299 467 117 HOH HOH . F 5 HOH A 300 468 118 HOH HOH . F 5 HOH A 301 469 119 HOH HOH . F 5 HOH A 302 470 120 HOH HOH . F 5 HOH A 303 471 121 HOH HOH . F 5 HOH A 304 472 122 HOH HOH . F 5 HOH A 305 473 123 HOH HOH . F 5 HOH A 306 474 124 HOH HOH . F 5 HOH A 307 475 125 HOH HOH . F 5 HOH A 308 476 126 HOH HOH . F 5 HOH A 309 477 127 HOH HOH . F 5 HOH A 310 478 128 HOH HOH . F 5 HOH A 311 479 129 HOH HOH . F 5 HOH A 312 480 130 HOH HOH . F 5 HOH A 313 481 131 HOH HOH . F 5 HOH A 314 482 133 HOH HOH . F 5 HOH A 315 483 134 HOH HOH . F 5 HOH A 316 484 135 HOH HOH . F 5 HOH A 317 485 140 HOH HOH . F 5 HOH A 318 486 141 HOH HOH . F 5 HOH A 319 487 142 HOH HOH . F 5 HOH A 320 488 143 HOH HOH . F 5 HOH A 321 489 144 HOH HOH . F 5 HOH A 322 490 145 HOH HOH . F 5 HOH A 323 491 148 HOH HOH . F 5 HOH A 324 492 149 HOH HOH . F 5 HOH A 325 493 151 HOH HOH . F 5 HOH A 326 494 155 HOH HOH . F 5 HOH A 327 495 156 HOH HOH . F 5 HOH A 328 496 159 HOH HOH . F 5 HOH A 329 497 160 HOH HOH . F 5 HOH A 330 498 161 HOH HOH . F 5 HOH A 331 499 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . E 4 -31.047 1.416 17.581 0.5 23.86 ? C1 BME 168 A 1 HETATM 2 C C2 BME . . . E 4 -32.52 1.616 17.933 0.5 24.55 ? C2 BME 168 A 1 HETATM 3 O O1 BME . . . E 4 -30.934 0.41 16.571 0.5 24.13 ? O1 BME 168 A 1 HETATM 4 S S2 BME . . . E 4 -33.643 0.832 16.723 0.5 24.53 ? S2 BME 168 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 383 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #