data_3HTH # _model_server_result.job_id lIEUziRMn0TyHvaQvnpUMA _model_server_result.datetime_utc '2024-11-23 10:41:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 3HTH # _exptl.entry_id 3HTH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROFLAVIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HTH _cell.length_a 99.719 _cell.length_b 99.719 _cell.length_c 133.73 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,I,J 1 1 C,H,K 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 89.153333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 74 1_555 E NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? metalc ? metalc2 A OE1 GLU 114 A GLU 94 1_555 E NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc3 A OE2 GLU 114 A GLU 94 1_555 E NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc4 C NE2 HIS 94 C HIS 74 1_555 H NI NI . C NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc5 C OE1 GLU 114 C GLU 94 1_555 H NI NI . C NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc6 C OE2 GLU 114 C GLU 94 1_555 H NI NI . C NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'C13 H11 N3' _chem_comp.formula_weight 209.247 _chem_comp.id PRL _chem_comp.mon_nstd_flag . _chem_comp.name PROFLAVIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PRL doub 260 n y C1 C13 PRL sing 261 n y C1 H1 PRL sing 262 n n C2 C3 PRL sing 263 n y C2 H2 PRL sing 264 n n C3 C4 PRL doub 265 n y C3 N15 PRL sing 266 n n C4 C11 PRL sing 267 n y C4 H4 PRL sing 268 n n C5 C6 PRL doub 269 n y C5 C14 PRL sing 270 n y C5 H5 PRL sing 271 n n C6 C7 PRL sing 272 n y C6 N16 PRL sing 273 n n C7 C8 PRL doub 274 n y C7 H7 PRL sing 275 n n C8 C12 PRL sing 276 n y C8 H8 PRL sing 277 n n C9 C12 PRL doub 278 n y C9 C13 PRL sing 279 n y C9 H9 PRL sing 280 n n N10 C11 PRL sing 281 n y N10 C14 PRL doub 282 n y C11 C13 PRL doub 283 n y C12 C14 PRL sing 284 n y N15 HNF1 PRL sing 285 n n N15 HNF2 PRL sing 286 n n N16 HNG1 PRL sing 287 n n N16 HNG2 PRL sing 288 n n # _atom_sites.entry_id 3HTH _atom_sites.fract_transf_matrix[1][1] 0.010028 _atom_sites.fract_transf_matrix[1][2] 0.00579 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NI A 1 199 199 NI NI . E 2 NI A 1 200 200 NI NI . F 3 PRL A 1 201 201 PRL PRL . G 3 PRL B 1 201 201 PRL PRL . H 2 NI C 1 200 200 NI NI . I 4 HOH A 1 301 2 HOH HOH . I 4 HOH A 2 302 3 HOH HOH . I 4 HOH A 3 303 4 HOH HOH . I 4 HOH A 4 304 5 HOH HOH . I 4 HOH A 5 305 6 HOH HOH . I 4 HOH A 6 306 17 HOH HOH . I 4 HOH A 7 307 18 HOH HOH . I 4 HOH A 8 308 25 HOH HOH . I 4 HOH A 9 309 26 HOH HOH . I 4 HOH A 10 310 27 HOH HOH . I 4 HOH A 11 311 32 HOH HOH . I 4 HOH A 12 312 33 HOH HOH . I 4 HOH A 13 313 43 HOH HOH . I 4 HOH A 14 314 44 HOH HOH . I 4 HOH A 15 315 45 HOH HOH . I 4 HOH A 16 316 48 HOH HOH . I 4 HOH A 17 317 49 HOH HOH . I 4 HOH A 18 318 50 HOH HOH . I 4 HOH A 19 319 52 HOH HOH . I 4 HOH A 20 320 54 HOH HOH . I 4 HOH A 21 321 58 HOH HOH . I 4 HOH A 22 322 59 HOH HOH . I 4 HOH A 23 323 63 HOH HOH . I 4 HOH A 24 324 66 HOH HOH . I 4 HOH A 25 325 67 HOH HOH . I 4 HOH A 26 326 73 HOH HOH . I 4 HOH A 27 327 79 HOH HOH . J 4 HOH B 1 301 1 HOH HOH . J 4 HOH B 2 302 7 HOH HOH . J 4 HOH B 3 303 8 HOH HOH . J 4 HOH B 4 304 9 HOH HOH . J 4 HOH B 5 305 10 HOH HOH . J 4 HOH B 6 306 24 HOH HOH . J 4 HOH B 7 307 28 HOH HOH . J 4 HOH B 8 308 29 HOH HOH . J 4 HOH B 9 309 30 HOH HOH . J 4 HOH B 10 310 31 HOH HOH . J 4 HOH B 11 311 34 HOH HOH . J 4 HOH B 12 312 35 HOH HOH . J 4 HOH B 13 313 41 HOH HOH . J 4 HOH B 14 314 42 HOH HOH . J 4 HOH B 15 315 46 HOH HOH . J 4 HOH B 16 316 47 HOH HOH . J 4 HOH B 17 317 51 HOH HOH . J 4 HOH B 18 318 53 HOH HOH . J 4 HOH B 19 319 55 HOH HOH . J 4 HOH B 20 320 56 HOH HOH . J 4 HOH B 21 321 60 HOH HOH . J 4 HOH B 22 322 61 HOH HOH . J 4 HOH B 23 323 62 HOH HOH . J 4 HOH B 24 324 68 HOH HOH . J 4 HOH B 25 325 69 HOH HOH . J 4 HOH B 26 326 70 HOH HOH . J 4 HOH B 27 327 80 HOH HOH . K 4 HOH C 1 301 11 HOH HOH . K 4 HOH C 2 302 12 HOH HOH . K 4 HOH C 3 303 13 HOH HOH . K 4 HOH C 4 304 14 HOH HOH . K 4 HOH C 5 305 15 HOH HOH . K 4 HOH C 6 306 16 HOH HOH . K 4 HOH C 7 307 19 HOH HOH . K 4 HOH C 8 308 20 HOH HOH . K 4 HOH C 9 309 21 HOH HOH . K 4 HOH C 10 310 22 HOH HOH . K 4 HOH C 11 311 23 HOH HOH . K 4 HOH C 12 312 36 HOH HOH . K 4 HOH C 13 313 37 HOH HOH . K 4 HOH C 14 314 38 HOH HOH . K 4 HOH C 15 315 39 HOH HOH . K 4 HOH C 16 316 40 HOH HOH . K 4 HOH C 17 317 57 HOH HOH . K 4 HOH C 18 318 64 HOH HOH . K 4 HOH C 19 319 65 HOH HOH . K 4 HOH C 20 320 71 HOH HOH . K 4 HOH C 21 321 72 HOH HOH . K 4 HOH C 22 322 74 HOH HOH . K 4 HOH C 23 323 75 HOH HOH . K 4 HOH C 24 324 76 HOH HOH . K 4 HOH C 25 325 77 HOH HOH . K 4 HOH C 26 326 78 HOH HOH . K 4 HOH C 27 327 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PRL . . . F 3 -44.633 34.285 -9.027 1 67.6 ? C1 PRL 201 A 1 HETATM 2 C C2 PRL . . . F 3 -43.848 34.624 -7.932 1 67.91 ? C2 PRL 201 A 1 HETATM 3 C C3 PRL . . . F 3 -42.669 35.437 -8.068 1 67.86 ? C3 PRL 201 A 1 HETATM 4 C C4 PRL . . . F 3 -42.261 35.928 -9.325 1 66.15 ? C4 PRL 201 A 1 HETATM 5 C C5 PRL . . . F 3 -42.936 36.244 -14.101 1 63.93 ? C5 PRL 201 A 1 HETATM 6 C C6 PRL . . . F 3 -43.677 35.922 -15.244 1 63.08 ? C6 PRL 201 A 1 HETATM 7 C C7 PRL . . . F 3 -44.859 35.124 -15.17 1 63.47 ? C7 PRL 201 A 1 HETATM 8 C C8 PRL . . . F 3 -45.325 34.628 -13.958 1 64.23 ? C8 PRL 201 A 1 HETATM 9 C C9 PRL . . . F 3 -45.038 34.425 -11.488 1 64.23 ? C9 PRL 201 A 1 HETATM 10 N N10 PRL . . . F 3 -42.654 36.06 -11.701 1 65.19 ? N10 PRL 201 A 1 HETATM 11 C C11 PRL . . . F 3 -43.026 35.611 -10.49 1 65.22 ? C11 PRL 201 A 1 HETATM 12 C C12 PRL . . . F 3 -44.607 34.917 -12.746 1 63.46 ? C12 PRL 201 A 1 HETATM 13 C C13 PRL . . . F 3 -44.266 34.753 -10.337 1 66.47 ? C13 PRL 201 A 1 HETATM 14 C C14 PRL . . . F 3 -43.359 35.765 -12.821 1 63.74 ? C14 PRL 201 A 1 HETATM 15 N N15 PRL . . . F 3 -41.915 35.75 -6.929 1 66 ? N15 PRL 201 A 1 HETATM 16 N N16 PRL . . . F 3 -43.245 36.391 -16.477 1 64.26 ? N16 PRL 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #