data_3HV6 # _model_server_result.job_id yVZPRQ5Ahn35eyVk1i4Iww _model_server_result.datetime_utc '2024-11-29 16:13:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":361}' # _entry.id 3HV6 # _exptl.entry_id 3HV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.599 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(2-morpholin-4-ylethoxy)phenyl]urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HV6 _cell.length_a 66.41 _cell.length_b 74.66 _cell.length_c 78.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H35 N5 O3' _chem_comp.formula_weight 477.599 _chem_comp.id R39 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(2-morpholin-4-ylethoxy)phenyl]urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-(3-tert-butyl-1-p-tolyl-1H-pyrazol-5-yl)-3-(4-(2-morpholinoethoxy)phenyl)urea # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAO CAR R39 sing 325 n n CAR NBG R39 sing 326 n n CAR HAR R39 sing 327 n n CAR HARA R39 sing 328 n n CAO OAX R39 sing 329 n n CAO HAO R39 sing 330 n n CAO HAOA R39 sing 331 n n OAX CAP R39 sing 332 n n CAS CAP R39 sing 333 n n CAP HAP R39 sing 334 n n CAP HAPA R39 sing 335 n n NBG CAS R39 sing 336 n n CAS HAS R39 sing 337 n n CAS HASA R39 sing 338 n n CAT NBG R39 sing 339 n n CAT CAQ R39 sing 340 n n CAT HAT R39 sing 341 n n CAT HATA R39 sing 342 n n CAQ OAY R39 sing 343 n n CAQ HAQ R39 sing 344 n n CAQ HAQA R39 sing 345 n n OAY CBC R39 sing 346 n n CAJ CBC R39 doub 347 n y CBC CAK R39 sing 348 n y CAK CAI R39 doub 349 n y CAK HAK R39 sing 350 n n CBB CAI R39 sing 351 n y CAI HAI R39 sing 352 n n CAJ CAH R39 sing 353 n y CAJ HAJ R39 sing 354 n n CAH CBB R39 doub 355 n y CAH HAH R39 sing 356 n n CBB NAV R39 sing 357 n n NAV CAZ R39 sing 358 n n NAV HNAV R39 sing 359 n n OAE CAZ R39 doub 360 n n CAZ NAW R39 sing 361 n n NAW CBE R39 sing 362 n n NAW HNAW R39 sing 363 n n CBE CAN R39 doub 364 n y CBE NBH R39 sing 365 n y CAN CBF R39 sing 366 n y CAN HAN R39 sing 367 n n CBF NAU R39 doub 368 n y CBF CBI R39 sing 369 n n CAD CBI R39 sing 370 n n CBI CAC R39 sing 371 n n CBI CAB R39 sing 372 n n CAC HAC R39 sing 373 n n CAC HACA R39 sing 374 n n CAC HACB R39 sing 375 n n CAD HAD R39 sing 376 n n CAD HADA R39 sing 377 n n CAD HADB R39 sing 378 n n CAB HAB R39 sing 379 n n CAB HABA R39 sing 380 n n CAB HABB R39 sing 381 n n NBH NAU R39 sing 382 n y NBH CBD R39 sing 383 n y CAL CBD R39 doub 384 n y CBD CAM R39 sing 385 n y CAL CAF R39 sing 386 n y CAL HAL R39 sing 387 n n CAF CBA R39 doub 388 n y CAF HAF R39 sing 389 n n CBA CAA R39 sing 390 n n CBA CAG R39 sing 391 n y CAA HAA R39 sing 392 n n CAA HAAA R39 sing 393 n n CAA HAAB R39 sing 394 n n CAM CAG R39 doub 395 n y CAG HAG R39 sing 396 n n CAM HAM R39 sing 397 n n # _atom_sites.entry_id 3HV6 _atom_sites.fract_transf_matrix[1][1] 0.015058 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 1000 1000 BOG BOG . C 3 R39 A 1 361 1 R39 R39 . D 2 BOG A 1 362 1000 BOG BOG . E 4 HOH A 1 363 1 HOH HOH . E 4 HOH A 2 364 2 HOH HOH . E 4 HOH A 3 365 3 HOH HOH . E 4 HOH A 4 366 4 HOH HOH . E 4 HOH A 5 367 5 HOH HOH . E 4 HOH A 6 368 6 HOH HOH . E 4 HOH A 7 369 7 HOH HOH . E 4 HOH A 8 370 8 HOH HOH . E 4 HOH A 9 371 9 HOH HOH . E 4 HOH A 10 372 10 HOH HOH . E 4 HOH A 11 373 11 HOH HOH . E 4 HOH A 12 374 12 HOH HOH . E 4 HOH A 13 375 14 HOH HOH . E 4 HOH A 14 376 15 HOH HOH . E 4 HOH A 15 377 16 HOH HOH . E 4 HOH A 16 378 17 HOH HOH . E 4 HOH A 17 379 18 HOH HOH . E 4 HOH A 18 380 19 HOH HOH . E 4 HOH A 19 381 20 HOH HOH . E 4 HOH A 20 382 21 HOH HOH . E 4 HOH A 21 383 22 HOH HOH . E 4 HOH A 22 384 23 HOH HOH . E 4 HOH A 23 385 24 HOH HOH . E 4 HOH A 24 386 25 HOH HOH . E 4 HOH A 25 387 26 HOH HOH . E 4 HOH A 26 388 27 HOH HOH . E 4 HOH A 27 389 28 HOH HOH . E 4 HOH A 28 390 29 HOH HOH . E 4 HOH A 29 391 30 HOH HOH . E 4 HOH A 30 392 31 HOH HOH . E 4 HOH A 31 393 32 HOH HOH . E 4 HOH A 32 394 33 HOH HOH . E 4 HOH A 33 395 34 HOH HOH . E 4 HOH A 34 396 35 HOH HOH . E 4 HOH A 35 397 36 HOH HOH . E 4 HOH A 36 398 37 HOH HOH . E 4 HOH A 37 399 38 HOH HOH . E 4 HOH A 38 400 39 HOH HOH . E 4 HOH A 39 401 40 HOH HOH . E 4 HOH A 40 402 41 HOH HOH . E 4 HOH A 41 403 42 HOH HOH . E 4 HOH A 42 404 43 HOH HOH . E 4 HOH A 43 405 44 HOH HOH . E 4 HOH A 44 406 45 HOH HOH . E 4 HOH A 45 407 46 HOH HOH . E 4 HOH A 46 408 47 HOH HOH . E 4 HOH A 47 409 48 HOH HOH . E 4 HOH A 48 410 49 HOH HOH . E 4 HOH A 49 411 50 HOH HOH . E 4 HOH A 50 412 51 HOH HOH . E 4 HOH A 51 413 52 HOH HOH . E 4 HOH A 52 414 53 HOH HOH . E 4 HOH A 53 415 54 HOH HOH . E 4 HOH A 54 416 55 HOH HOH . E 4 HOH A 55 417 56 HOH HOH . E 4 HOH A 56 418 57 HOH HOH . E 4 HOH A 57 419 58 HOH HOH . E 4 HOH A 58 420 59 HOH HOH . E 4 HOH A 59 421 60 HOH HOH . E 4 HOH A 60 422 61 HOH HOH . E 4 HOH A 61 423 62 HOH HOH . E 4 HOH A 62 424 63 HOH HOH . E 4 HOH A 63 425 64 HOH HOH . E 4 HOH A 64 426 65 HOH HOH . E 4 HOH A 65 427 66 HOH HOH . E 4 HOH A 66 428 67 HOH HOH . E 4 HOH A 67 429 68 HOH HOH . E 4 HOH A 68 430 69 HOH HOH . E 4 HOH A 69 431 70 HOH HOH . E 4 HOH A 70 432 71 HOH HOH . E 4 HOH A 71 433 72 HOH HOH . E 4 HOH A 72 434 73 HOH HOH . E 4 HOH A 73 435 74 HOH HOH . E 4 HOH A 74 436 75 HOH HOH . E 4 HOH A 75 437 77 HOH HOH . E 4 HOH A 76 438 78 HOH HOH . E 4 HOH A 77 439 79 HOH HOH . E 4 HOH A 78 440 80 HOH HOH . E 4 HOH A 79 441 81 HOH HOH . E 4 HOH A 80 442 82 HOH HOH . E 4 HOH A 81 443 83 HOH HOH . E 4 HOH A 82 444 84 HOH HOH . E 4 HOH A 83 445 85 HOH HOH . E 4 HOH A 84 446 86 HOH HOH . E 4 HOH A 85 447 87 HOH HOH . E 4 HOH A 86 448 88 HOH HOH . E 4 HOH A 87 449 89 HOH HOH . E 4 HOH A 88 450 90 HOH HOH . E 4 HOH A 89 451 91 HOH HOH . E 4 HOH A 90 452 92 HOH HOH . E 4 HOH A 91 453 94 HOH HOH . E 4 HOH A 92 454 95 HOH HOH . E 4 HOH A 93 455 96 HOH HOH . E 4 HOH A 94 456 98 HOH HOH . E 4 HOH A 95 457 99 HOH HOH . E 4 HOH A 96 458 100 HOH HOH . E 4 HOH A 97 459 101 HOH HOH . E 4 HOH A 98 460 102 HOH HOH . E 4 HOH A 99 461 103 HOH HOH . E 4 HOH A 100 462 104 HOH HOH . E 4 HOH A 101 463 105 HOH HOH . E 4 HOH A 102 464 106 HOH HOH . E 4 HOH A 103 465 107 HOH HOH . E 4 HOH A 104 466 108 HOH HOH . E 4 HOH A 105 467 109 HOH HOH . E 4 HOH A 106 468 110 HOH HOH . E 4 HOH A 107 469 112 HOH HOH . E 4 HOH A 108 470 113 HOH HOH . E 4 HOH A 109 471 114 HOH HOH . E 4 HOH A 110 472 115 HOH HOH . E 4 HOH A 111 473 116 HOH HOH . E 4 HOH A 112 474 117 HOH HOH . E 4 HOH A 113 475 118 HOH HOH . E 4 HOH A 114 476 119 HOH HOH . E 4 HOH A 115 477 120 HOH HOH . E 4 HOH A 116 478 121 HOH HOH . E 4 HOH A 117 479 122 HOH HOH . E 4 HOH A 118 480 123 HOH HOH . E 4 HOH A 119 481 124 HOH HOH . E 4 HOH A 120 482 125 HOH HOH . E 4 HOH A 121 483 126 HOH HOH . E 4 HOH A 122 484 127 HOH HOH . E 4 HOH A 123 485 128 HOH HOH . E 4 HOH A 124 486 129 HOH HOH . E 4 HOH A 125 487 130 HOH HOH . E 4 HOH A 126 488 131 HOH HOH . E 4 HOH A 127 489 132 HOH HOH . E 4 HOH A 128 490 133 HOH HOH . E 4 HOH A 129 491 134 HOH HOH . E 4 HOH A 130 492 135 HOH HOH . E 4 HOH A 131 493 136 HOH HOH . E 4 HOH A 132 494 137 HOH HOH . E 4 HOH A 133 495 138 HOH HOH . E 4 HOH A 134 496 139 HOH HOH . E 4 HOH A 135 497 140 HOH HOH . E 4 HOH A 136 498 141 HOH HOH . E 4 HOH A 137 499 142 HOH HOH . E 4 HOH A 138 500 143 HOH HOH . E 4 HOH A 139 501 144 HOH HOH . E 4 HOH A 140 502 146 HOH HOH . E 4 HOH A 141 503 147 HOH HOH . E 4 HOH A 142 504 148 HOH HOH . E 4 HOH A 143 505 149 HOH HOH . E 4 HOH A 144 506 150 HOH HOH . E 4 HOH A 145 507 151 HOH HOH . E 4 HOH A 146 508 152 HOH HOH . E 4 HOH A 147 509 153 HOH HOH . E 4 HOH A 148 510 154 HOH HOH . E 4 HOH A 149 511 155 HOH HOH . E 4 HOH A 150 512 156 HOH HOH . E 4 HOH A 151 513 157 HOH HOH . E 4 HOH A 152 514 158 HOH HOH . E 4 HOH A 153 515 159 HOH HOH . E 4 HOH A 154 516 160 HOH HOH . E 4 HOH A 155 517 161 HOH HOH . E 4 HOH A 156 518 162 HOH HOH . E 4 HOH A 157 519 163 HOH HOH . E 4 HOH A 158 520 164 HOH HOH . E 4 HOH A 159 521 165 HOH HOH . E 4 HOH A 160 522 166 HOH HOH . E 4 HOH A 161 523 167 HOH HOH . E 4 HOH A 162 524 168 HOH HOH . E 4 HOH A 163 525 169 HOH HOH . E 4 HOH A 164 526 170 HOH HOH . E 4 HOH A 165 527 171 HOH HOH . E 4 HOH A 166 528 172 HOH HOH . E 4 HOH A 167 529 173 HOH HOH . E 4 HOH A 168 530 174 HOH HOH . E 4 HOH A 169 531 175 HOH HOH . E 4 HOH A 170 532 176 HOH HOH . E 4 HOH A 171 533 177 HOH HOH . E 4 HOH A 172 534 178 HOH HOH . E 4 HOH A 173 535 179 HOH HOH . E 4 HOH A 174 536 180 HOH HOH . E 4 HOH A 175 537 181 HOH HOH . E 4 HOH A 176 538 182 HOH HOH . E 4 HOH A 177 539 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAR R39 . . . C 3 -2.012 1.464 -23.827 1 42.16 ? CAR R39 361 A 1 HETATM 2 C CAO R39 . . . C 3 -2.5 2.923 -23.837 1 43.06 ? CAO R39 361 A 1 HETATM 3 O OAX R39 . . . C 3 -1.825 3.618 -22.758 1 41.55 ? OAX R39 361 A 1 HETATM 4 C CAP R39 . . . C 3 -1.995 3.032 -21.449 1 42.76 ? CAP R39 361 A 1 HETATM 5 C CAS R39 . . . C 3 -2.837 1.739 -21.482 1 41.54 ? CAS R39 361 A 1 HETATM 6 N NBG R39 . . . C 3 -2.371 0.814 -22.543 1 41.32 ? NBG R39 361 A 1 HETATM 7 C CAT R39 . . . C 3 -3.39 -0.185 -22.844 1 39.33 ? CAT R39 361 A 1 HETATM 8 C CAQ R39 . . . C 3 -3.189 -1.375 -21.92 1 35.84 ? CAQ R39 361 A 1 HETATM 9 O OAY R39 . . . C 3 -3.834 -0.969 -20.696 1 30.25 ? OAY R39 361 A 1 HETATM 10 C CBC R39 . . . C 3 -3.37 -1.602 -19.583 1 27.91 ? CBC R39 361 A 1 HETATM 11 C CAK R39 . . . C 3 -3.883 -1.184 -18.369 1 30.97 ? CAK R39 361 A 1 HETATM 12 C CAI R39 . . . C 3 -3.472 -1.764 -17.172 1 28.76 ? CAI R39 361 A 1 HETATM 13 C CAJ R39 . . . C 3 -2.436 -2.634 -19.609 1 30.44 ? CAJ R39 361 A 1 HETATM 14 C CAH R39 . . . C 3 -2.043 -3.213 -18.401 1 26.94 ? CAH R39 361 A 1 HETATM 15 C CBB R39 . . . C 3 -2.556 -2.784 -17.176 1 23.95 ? CBB R39 361 A 1 HETATM 16 N NAV R39 . . . C 3 -2.142 -3.39 -16.033 1 22.68 ? NAV R39 361 A 1 HETATM 17 C CAZ R39 . . . C 3 -0.93 -3.236 -15.531 1 18.03 ? CAZ R39 361 A 1 HETATM 18 O OAE R39 . . . C 3 -0.132 -2.443 -16.043 1 16.38 ? OAE R39 361 A 1 HETATM 19 N NAW R39 . . . C 3 -0.637 -3.928 -14.411 1 18.71 ? NAW R39 361 A 1 HETATM 20 C CBE R39 . . . C 3 0.538 -3.875 -13.75 1 17.19 ? CBE R39 361 A 1 HETATM 21 C CAN R39 . . . C 3 1.386 -2.817 -13.595 1 18.19 ? CAN R39 361 A 1 HETATM 22 C CBF R39 . . . C 3 2.373 -3.291 -12.813 1 18.52 ? CBF R39 361 A 1 HETATM 23 C CBI R39 . . . C 3 3.633 -2.557 -12.312 1 19.4 ? CBI R39 361 A 1 HETATM 24 C CAC R39 . . . C 3 4.638 -3.508 -11.649 1 20.46 ? CAC R39 361 A 1 HETATM 25 C CAD R39 . . . C 3 4.345 -1.888 -13.473 1 18.87 ? CAD R39 361 A 1 HETATM 26 C CAB R39 . . . C 3 3.207 -1.519 -11.245 1 20.83 ? CAB R39 361 A 1 HETATM 27 N NAU R39 . . . C 3 2.116 -4.574 -12.511 1 17.23 ? NAU R39 361 A 1 HETATM 28 N NBH R39 . . . C 3 1.039 -4.903 -13.054 1 19.34 ? NBH R39 361 A 1 HETATM 29 C CBD R39 . . . C 3 0.497 -6.146 -12.934 1 19.78 ? CBD R39 361 A 1 HETATM 30 C CAL R39 . . . C 3 0.022 -6.836 -14.053 1 18.67 ? CAL R39 361 A 1 HETATM 31 C CAF R39 . . . C 3 -0.506 -8.138 -13.915 1 22.55 ? CAF R39 361 A 1 HETATM 32 C CBA R39 . . . C 3 -0.556 -8.722 -12.641 1 20.48 ? CBA R39 361 A 1 HETATM 33 C CAA R39 . . . C 3 -1.124 -10.137 -12.478 1 23.77 ? CAA R39 361 A 1 HETATM 34 C CAG R39 . . . C 3 -0.072 -8.051 -11.506 1 22.03 ? CAG R39 361 A 1 HETATM 35 C CAM R39 . . . C 3 0.46 -6.757 -11.653 1 23 ? CAM R39 361 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #