data_3HV7 # _model_server_result.job_id 4fbkwX5WVMyRM_2xKfDesw _model_server_result.datetime_utc '2024-11-06 20:41:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3HV7 # _exptl.entry_id 3HV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.488 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HV7 _cell.length_a 66.71 _cell.length_b 74.52 _cell.length_c 78.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H25 N5 O' _chem_comp.formula_weight 399.488 _chem_comp.id 1AU _chem_comp.mon_nstd_flag . _chem_comp.name 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-[2-(3-Amino-phenyl)-5-tert-butyl-2H-pyrazol-3-yl]-3-naphthalen-1-yl-urea # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAX CBB 1AU doub 1 n y CBA CBB 1AU sing 2 n y CBB CAO 1AU sing 3 n y CAO CAG 1AU doub 4 n y CAO HAO 1AU sing 5 n n CAF CAG 1AU sing 6 n y CAG HAG 1AU sing 7 n n CAM CAF 1AU doub 8 n y CAF HAF 1AU sing 9 n n CBA CAM 1AU sing 10 n y CAM HAM 1AU sing 11 n n CAN CBA 1AU doub 12 n y CAI CAN 1AU sing 13 n y CAN HAN 1AU sing 14 n n CAI CAL 1AU doub 15 n y CAI HAI 1AU sing 16 n n CAL CAX 1AU sing 17 n y CAL HAL 1AU sing 18 n n CAX NAS 1AU sing 19 n n CAU NAS 1AU sing 20 n n NAS HNAS 1AU sing 21 n n OAE CAU 1AU doub 22 n n CAU NAT 1AU sing 23 n n CAZ NAT 1AU sing 24 n n NAT HNAT 1AU sing 25 n n CAQ CAZ 1AU doub 26 n y CAZ NBC 1AU sing 27 n y CAQ CAY 1AU sing 28 n y CAQ HAQ 1AU sing 29 n n CBD CAY 1AU sing 30 n n CAY NAR 1AU doub 31 n y CAC CBD 1AU sing 32 n n CAB CBD 1AU sing 33 n n CBD CAA 1AU sing 34 n n CAB HAB 1AU sing 35 n n CAB HABA 1AU sing 36 n n CAB HABB 1AU sing 37 n n CAC HAC 1AU sing 38 n n CAC HACA 1AU sing 39 n n CAC HACB 1AU sing 40 n n CAA HAA 1AU sing 41 n n CAA HAAA 1AU sing 42 n n CAA HAAB 1AU sing 43 n n NAR NBC 1AU sing 44 n y NBC CAW 1AU sing 45 n y CAW CAK 1AU doub 46 n y CAW CAP 1AU sing 47 n y CAP CAV 1AU doub 48 n y CAP HAP 1AU sing 49 n n CAK CAH 1AU sing 50 n y CAK HAK 1AU sing 51 n n CAH CAJ 1AU doub 52 n y CAH HAH 1AU sing 53 n n CAV CAJ 1AU sing 54 n y CAJ HAJ 1AU sing 55 n n CAV NAD 1AU sing 56 n n NAD HNAD 1AU sing 57 n n NAD HNAA 1AU sing 58 n n # _atom_sites.entry_id 3HV7 _atom_sites.fract_transf_matrix[1][1] 0.01499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012673 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1AU A 1 361 1 1AU 1AU . C 3 BOG A 1 1000 1000 BOG BOG . D 4 HOH A 1 362 1 HOH HOH . D 4 HOH A 2 363 2 HOH HOH . D 4 HOH A 3 364 3 HOH HOH . D 4 HOH A 4 365 4 HOH HOH . D 4 HOH A 5 366 5 HOH HOH . D 4 HOH A 6 367 6 HOH HOH . D 4 HOH A 7 368 7 HOH HOH . D 4 HOH A 8 369 8 HOH HOH . D 4 HOH A 9 370 9 HOH HOH . D 4 HOH A 10 371 10 HOH HOH . D 4 HOH A 11 372 11 HOH HOH . D 4 HOH A 12 373 12 HOH HOH . D 4 HOH A 13 374 13 HOH HOH . D 4 HOH A 14 375 14 HOH HOH . D 4 HOH A 15 376 15 HOH HOH . D 4 HOH A 16 377 16 HOH HOH . D 4 HOH A 17 378 17 HOH HOH . D 4 HOH A 18 379 18 HOH HOH . D 4 HOH A 19 380 19 HOH HOH . D 4 HOH A 20 381 20 HOH HOH . D 4 HOH A 21 382 21 HOH HOH . D 4 HOH A 22 383 22 HOH HOH . D 4 HOH A 23 384 23 HOH HOH . D 4 HOH A 24 385 24 HOH HOH . D 4 HOH A 25 386 25 HOH HOH . D 4 HOH A 26 387 26 HOH HOH . D 4 HOH A 27 388 27 HOH HOH . D 4 HOH A 28 389 28 HOH HOH . D 4 HOH A 29 390 29 HOH HOH . D 4 HOH A 30 391 30 HOH HOH . D 4 HOH A 31 392 31 HOH HOH . D 4 HOH A 32 393 32 HOH HOH . D 4 HOH A 33 394 33 HOH HOH . D 4 HOH A 34 395 36 HOH HOH . D 4 HOH A 35 396 37 HOH HOH . D 4 HOH A 36 397 38 HOH HOH . D 4 HOH A 37 398 39 HOH HOH . D 4 HOH A 38 399 40 HOH HOH . D 4 HOH A 39 400 41 HOH HOH . D 4 HOH A 40 401 42 HOH HOH . D 4 HOH A 41 402 43 HOH HOH . D 4 HOH A 42 403 44 HOH HOH . D 4 HOH A 43 404 45 HOH HOH . D 4 HOH A 44 405 46 HOH HOH . D 4 HOH A 45 406 47 HOH HOH . D 4 HOH A 46 407 48 HOH HOH . D 4 HOH A 47 408 49 HOH HOH . D 4 HOH A 48 409 50 HOH HOH . D 4 HOH A 49 410 51 HOH HOH . D 4 HOH A 50 411 52 HOH HOH . D 4 HOH A 51 412 53 HOH HOH . D 4 HOH A 52 413 54 HOH HOH . D 4 HOH A 53 414 55 HOH HOH . D 4 HOH A 54 415 56 HOH HOH . D 4 HOH A 55 416 57 HOH HOH . D 4 HOH A 56 417 58 HOH HOH . D 4 HOH A 57 418 59 HOH HOH . D 4 HOH A 58 419 60 HOH HOH . D 4 HOH A 59 420 61 HOH HOH . D 4 HOH A 60 421 62 HOH HOH . D 4 HOH A 61 422 63 HOH HOH . D 4 HOH A 62 423 64 HOH HOH . D 4 HOH A 63 424 65 HOH HOH . D 4 HOH A 64 425 66 HOH HOH . D 4 HOH A 65 426 67 HOH HOH . D 4 HOH A 66 427 68 HOH HOH . D 4 HOH A 67 428 69 HOH HOH . D 4 HOH A 68 429 70 HOH HOH . D 4 HOH A 69 430 71 HOH HOH . D 4 HOH A 70 431 72 HOH HOH . D 4 HOH A 71 432 73 HOH HOH . D 4 HOH A 72 433 74 HOH HOH . D 4 HOH A 73 434 75 HOH HOH . D 4 HOH A 74 435 76 HOH HOH . D 4 HOH A 75 436 77 HOH HOH . D 4 HOH A 76 437 78 HOH HOH . D 4 HOH A 77 438 79 HOH HOH . D 4 HOH A 78 439 80 HOH HOH . D 4 HOH A 79 440 81 HOH HOH . D 4 HOH A 80 441 82 HOH HOH . D 4 HOH A 81 442 83 HOH HOH . D 4 HOH A 82 443 84 HOH HOH . D 4 HOH A 83 444 85 HOH HOH . D 4 HOH A 84 445 86 HOH HOH . D 4 HOH A 85 446 87 HOH HOH . D 4 HOH A 86 447 88 HOH HOH . D 4 HOH A 87 448 89 HOH HOH . D 4 HOH A 88 449 90 HOH HOH . D 4 HOH A 89 450 91 HOH HOH . D 4 HOH A 90 451 92 HOH HOH . D 4 HOH A 91 452 93 HOH HOH . D 4 HOH A 92 453 94 HOH HOH . D 4 HOH A 93 454 95 HOH HOH . D 4 HOH A 94 455 96 HOH HOH . D 4 HOH A 95 456 98 HOH HOH . D 4 HOH A 96 457 99 HOH HOH . D 4 HOH A 97 458 100 HOH HOH . D 4 HOH A 98 459 101 HOH HOH . D 4 HOH A 99 460 102 HOH HOH . D 4 HOH A 100 461 103 HOH HOH . D 4 HOH A 101 462 104 HOH HOH . D 4 HOH A 102 463 105 HOH HOH . D 4 HOH A 103 464 106 HOH HOH . D 4 HOH A 104 465 107 HOH HOH . D 4 HOH A 105 466 108 HOH HOH . D 4 HOH A 106 467 109 HOH HOH . D 4 HOH A 107 468 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBB 1AU . . . B 2 -3.795 -2.025 -17.215 1 10.7 ? CBB 1AU 361 A 1 HETATM 2 C CAO 1AU . . . B 2 -4.431 -1.812 -15.979 1 11.32 ? CAO 1AU 361 A 1 HETATM 3 C CAG 1AU . . . B 2 -5.524 -0.97 -15.932 1 11.24 ? CAG 1AU 361 A 1 HETATM 4 C CAF 1AU . . . B 2 -6.027 -0.381 -17.103 1 9.78 ? CAF 1AU 361 A 1 HETATM 5 C CAM 1AU . . . B 2 -5.408 -0.583 -18.309 1 10.53 ? CAM 1AU 361 A 1 HETATM 6 C CBA 1AU . . . B 2 -4.282 -1.403 -18.379 1 12.16 ? CBA 1AU 361 A 1 HETATM 7 C CAN 1AU . . . B 2 -3.666 -1.585 -19.607 1 10.6 ? CAN 1AU 361 A 1 HETATM 8 C CAI 1AU . . . B 2 -2.535 -2.405 -19.663 1 11.56 ? CAI 1AU 361 A 1 HETATM 9 C CAL 1AU . . . B 2 -2.035 -3.008 -18.505 1 11.78 ? CAL 1AU 361 A 1 HETATM 10 C CAX 1AU . . . B 2 -2.668 -2.825 -17.265 1 11.24 ? CAX 1AU 361 A 1 HETATM 11 N NAS 1AU . . . B 2 -2.2 -3.444 -16.152 1 10.16 ? NAS 1AU 361 A 1 HETATM 12 C CAU 1AU . . . B 2 -0.955 -3.305 -15.719 1 11.6 ? CAU 1AU 361 A 1 HETATM 13 O OAE 1AU . . . B 2 -0.135 -2.56 -16.281 1 12.69 ? OAE 1AU 361 A 1 HETATM 14 N NAT 1AU . . . B 2 -0.652 -4.045 -14.644 1 10.31 ? NAT 1AU 361 A 1 HETATM 15 C CAZ 1AU . . . B 2 0.522 -4.025 -13.985 1 10.6 ? CAZ 1AU 361 A 1 HETATM 16 C CAQ 1AU . . . B 2 1.338 -2.974 -13.794 1 10.36 ? CAQ 1AU 361 A 1 HETATM 17 C CAY 1AU . . . B 2 2.336 -3.465 -12.998 1 12.15 ? CAY 1AU 361 A 1 HETATM 18 C CBD 1AU . . . B 2 3.594 -2.706 -12.484 1 11.94 ? CBD 1AU 361 A 1 HETATM 19 C CAB 1AU . . . B 2 3.14 -1.704 -11.376 1 12.91 ? CAB 1AU 361 A 1 HETATM 20 C CAC 1AU . . . B 2 4.711 -3.636 -11.967 1 12.3 ? CAC 1AU 361 A 1 HETATM 21 C CAA 1AU . . . B 2 4.26 -1.979 -13.632 1 9.51 ? CAA 1AU 361 A 1 HETATM 22 N NAR 1AU . . . B 2 2.094 -4.752 -12.731 1 11.67 ? NAR 1AU 361 A 1 HETATM 23 N NBC 1AU . . . B 2 1.009 -5.068 -13.288 1 13.72 ? NBC 1AU 361 A 1 HETATM 24 C CAW 1AU . . . B 2 0.468 -6.32 -13.211 1 12.34 ? CAW 1AU 361 A 1 HETATM 25 C CAP 1AU . . . B 2 0.037 -7.065 -14.342 1 12.34 ? CAP 1AU 361 A 1 HETATM 26 C CAK 1AU . . . B 2 0.413 -6.923 -11.952 1 11.43 ? CAK 1AU 361 A 1 HETATM 27 C CAH 1AU . . . B 2 -0.103 -8.212 -11.786 1 12.75 ? CAH 1AU 361 A 1 HETATM 28 C CAJ 1AU . . . B 2 -0.53 -8.942 -12.903 1 12.74 ? CAJ 1AU 361 A 1 HETATM 29 C CAV 1AU . . . B 2 -0.473 -8.373 -14.17 1 12.79 ? CAV 1AU 361 A 1 HETATM 30 N NAD 1AU . . . B 2 -0.927 -9.097 -15.187 1 12.83 ? NAD 1AU 361 A 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #