data_3HW9 # _model_server_result.job_id sUwKUq43W4EdhZlebJcJEg _model_server_result.datetime_utc '2025-07-01 16:01:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":341}' # _entry.id 3HW9 # _exptl.entry_id 3HW9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HW9 _cell.length_a 117.545 _cell.length_b 117.545 _cell.length_c 121.287 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1,2,3 B,F,G,H,I,J,L 2 1,4,5 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 2_445 -y-1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -58.7725 -101.796956 0 5 'crystal symmetry operation' 3_545 -x+y,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 58.7725 -101.796956 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 224 n n O1 H1 P6G sing 225 n n C2 C3 P6G sing 226 n n C2 H21 P6G sing 227 n n C2 H22 P6G sing 228 n n C3 O4 P6G sing 229 n n C3 H31 P6G sing 230 n n C3 H32 P6G sing 231 n n O4 C5 P6G sing 232 n n C5 C6 P6G sing 233 n n C5 H51 P6G sing 234 n n C5 H52 P6G sing 235 n n C6 O7 P6G sing 236 n n C6 H61 P6G sing 237 n n C6 H62 P6G sing 238 n n O7 C8 P6G sing 239 n n C8 C9 P6G sing 240 n n C8 H81 P6G sing 241 n n C8 H82 P6G sing 242 n n C9 O10 P6G sing 243 n n C9 H91 P6G sing 244 n n C9 H92 P6G sing 245 n n O10 C11 P6G sing 246 n n C11 C12 P6G sing 247 n n C11 H111 P6G sing 248 n n C11 H112 P6G sing 249 n n C12 O13 P6G sing 250 n n C12 H121 P6G sing 251 n n C12 H122 P6G sing 252 n n O13 C14 P6G sing 253 n n C14 C15 P6G sing 254 n n C14 H141 P6G sing 255 n n C14 H142 P6G sing 256 n n C15 O16 P6G sing 257 n n C15 H151 P6G sing 258 n n C15 H152 P6G sing 259 n n O16 C17 P6G sing 260 n n C17 C18 P6G sing 261 n n C17 H171 P6G sing 262 n n C17 H172 P6G sing 263 n n C18 O19 P6G sing 264 n n C18 H181 P6G sing 265 n n C18 H182 P6G sing 266 n n O19 H19 P6G sing 267 n n # _atom_sites.entry_id 3HW9 _atom_sites.fract_transf_matrix[1][1] 0.008507 _atom_sites.fract_transf_matrix[1][2] 0.004912 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P6G A 1 341 341 P6G P6G . D 3 K A 1 342 342 K K . E 4 CL A 1 343 343 CL CL . F 2 P6G B 1 341 341 P6G P6G . G 3 K B 1 342 342 K K . H 3 K B 1 343 343 K K . I 3 K B 1 344 344 K K . J 4 CL B 1 345 345 CL CL . K 5 HOH A 1 344 344 HOH HOH . K 5 HOH A 2 345 345 HOH HOH . K 5 HOH A 3 346 346 HOH HOH . K 5 HOH A 4 347 347 HOH HOH . K 5 HOH A 5 348 348 HOH HOH . K 5 HOH A 6 349 349 HOH HOH . K 5 HOH A 7 350 350 HOH HOH . K 5 HOH A 8 351 351 HOH HOH . K 5 HOH A 9 352 352 HOH HOH . K 5 HOH A 10 353 353 HOH HOH . K 5 HOH A 11 354 354 HOH HOH . K 5 HOH A 12 355 355 HOH HOH . K 5 HOH A 13 356 356 HOH HOH . K 5 HOH A 14 357 357 HOH HOH . K 5 HOH A 15 358 358 HOH HOH . K 5 HOH A 16 359 359 HOH HOH . K 5 HOH A 17 360 360 HOH HOH . K 5 HOH A 18 361 361 HOH HOH . K 5 HOH A 19 362 362 HOH HOH . K 5 HOH A 20 363 363 HOH HOH . K 5 HOH A 21 364 364 HOH HOH . K 5 HOH A 22 365 365 HOH HOH . K 5 HOH A 23 366 366 HOH HOH . K 5 HOH A 24 367 367 HOH HOH . K 5 HOH A 25 368 368 HOH HOH . K 5 HOH A 26 369 369 HOH HOH . K 5 HOH A 27 370 370 HOH HOH . K 5 HOH A 28 371 371 HOH HOH . K 5 HOH A 29 372 372 HOH HOH . K 5 HOH A 30 373 373 HOH HOH . K 5 HOH A 31 374 374 HOH HOH . K 5 HOH A 32 375 375 HOH HOH . K 5 HOH A 33 376 376 HOH HOH . K 5 HOH A 34 377 377 HOH HOH . K 5 HOH A 35 378 378 HOH HOH . K 5 HOH A 36 379 379 HOH HOH . K 5 HOH A 37 380 380 HOH HOH . K 5 HOH A 38 381 381 HOH HOH . K 5 HOH A 39 382 382 HOH HOH . K 5 HOH A 40 383 383 HOH HOH . K 5 HOH A 41 384 384 HOH HOH . K 5 HOH A 42 385 385 HOH HOH . K 5 HOH A 43 386 386 HOH HOH . K 5 HOH A 44 387 387 HOH HOH . K 5 HOH A 45 388 388 HOH HOH . K 5 HOH A 46 389 389 HOH HOH . K 5 HOH A 47 390 390 HOH HOH . K 5 HOH A 48 391 391 HOH HOH . K 5 HOH A 49 392 392 HOH HOH . K 5 HOH A 50 393 393 HOH HOH . K 5 HOH A 51 394 394 HOH HOH . K 5 HOH A 52 395 395 HOH HOH . K 5 HOH A 53 396 396 HOH HOH . K 5 HOH A 54 397 397 HOH HOH . K 5 HOH A 55 398 398 HOH HOH . K 5 HOH A 56 399 399 HOH HOH . K 5 HOH A 57 400 400 HOH HOH . K 5 HOH A 58 401 401 HOH HOH . K 5 HOH A 59 402 402 HOH HOH . K 5 HOH A 60 403 403 HOH HOH . K 5 HOH A 61 404 404 HOH HOH . K 5 HOH A 62 405 405 HOH HOH . K 5 HOH A 63 406 406 HOH HOH . K 5 HOH A 64 407 407 HOH HOH . K 5 HOH A 65 408 408 HOH HOH . K 5 HOH A 66 409 409 HOH HOH . K 5 HOH A 67 410 410 HOH HOH . K 5 HOH A 68 411 411 HOH HOH . L 5 HOH B 1 346 346 HOH HOH . L 5 HOH B 2 347 347 HOH HOH . L 5 HOH B 3 348 348 HOH HOH . L 5 HOH B 4 349 349 HOH HOH . L 5 HOH B 5 350 350 HOH HOH . L 5 HOH B 6 351 351 HOH HOH . L 5 HOH B 7 352 352 HOH HOH . L 5 HOH B 8 353 353 HOH HOH . L 5 HOH B 9 354 354 HOH HOH . L 5 HOH B 10 355 355 HOH HOH . L 5 HOH B 11 356 356 HOH HOH . L 5 HOH B 12 357 357 HOH HOH . L 5 HOH B 13 358 358 HOH HOH . L 5 HOH B 14 359 359 HOH HOH . L 5 HOH B 15 360 360 HOH HOH . L 5 HOH B 16 361 361 HOH HOH . L 5 HOH B 17 362 362 HOH HOH . L 5 HOH B 18 363 363 HOH HOH . L 5 HOH B 19 364 364 HOH HOH . L 5 HOH B 20 365 365 HOH HOH . L 5 HOH B 21 366 366 HOH HOH . L 5 HOH B 22 367 367 HOH HOH . L 5 HOH B 23 368 368 HOH HOH . L 5 HOH B 24 369 369 HOH HOH . L 5 HOH B 25 370 370 HOH HOH . L 5 HOH B 26 371 371 HOH HOH . L 5 HOH B 27 372 372 HOH HOH . L 5 HOH B 28 373 373 HOH HOH . L 5 HOH B 29 374 374 HOH HOH . L 5 HOH B 30 375 375 HOH HOH . L 5 HOH B 31 376 376 HOH HOH . L 5 HOH B 32 377 377 HOH HOH . L 5 HOH B 33 378 378 HOH HOH . L 5 HOH B 34 379 379 HOH HOH . L 5 HOH B 35 380 380 HOH HOH . L 5 HOH B 36 381 381 HOH HOH . L 5 HOH B 37 382 382 HOH HOH . L 5 HOH B 38 383 383 HOH HOH . L 5 HOH B 39 384 384 HOH HOH . L 5 HOH B 40 385 385 HOH HOH . L 5 HOH B 41 386 386 HOH HOH . L 5 HOH B 42 387 387 HOH HOH . L 5 HOH B 43 388 388 HOH HOH . L 5 HOH B 44 389 389 HOH HOH . L 5 HOH B 45 390 390 HOH HOH . L 5 HOH B 46 391 391 HOH HOH . L 5 HOH B 47 392 392 HOH HOH . L 5 HOH B 48 393 393 HOH HOH . L 5 HOH B 49 394 394 HOH HOH . L 5 HOH B 50 395 395 HOH HOH . L 5 HOH B 51 396 396 HOH HOH . L 5 HOH B 52 397 397 HOH HOH . L 5 HOH B 53 398 398 HOH HOH . L 5 HOH B 54 399 399 HOH HOH . L 5 HOH B 55 400 400 HOH HOH . L 5 HOH B 56 401 401 HOH HOH . L 5 HOH B 57 402 402 HOH HOH . L 5 HOH B 58 403 403 HOH HOH . L 5 HOH B 59 404 404 HOH HOH . L 5 HOH B 60 405 405 HOH HOH . L 5 HOH B 61 406 406 HOH HOH . L 5 HOH B 62 407 407 HOH HOH . L 5 HOH B 63 408 408 HOH HOH . L 5 HOH B 64 409 409 HOH HOH . L 5 HOH B 65 410 410 HOH HOH . L 5 HOH B 66 411 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . C 2 -17.798 -10.863 -0.025 1 49.88 ? O1 P6G 341 A 1 HETATM 2 C C2 P6G . . . C 2 -18.508 -9.805 -0.678 1 56.73 ? C2 P6G 341 A 1 HETATM 3 C C3 P6G . . . C 2 -19.046 -8.834 0.367 1 66.01 ? C3 P6G 341 A 1 HETATM 4 O O4 P6G . . . C 2 -19.209 -7.546 -0.224 1 76.17 ? O4 P6G 341 A 1 HETATM 5 C C5 P6G . . . C 2 -20.242 -6.796 0.412 1 74.97 ? C5 P6G 341 A 1 HETATM 6 C C6 P6G . . . C 2 -21.212 -6.27 -0.64 1 73.29 ? C6 P6G 341 A 1 HETATM 7 O O7 P6G . . . C 2 -20.509 -5.468 -1.586 1 79.73 ? O7 P6G 341 A 1 HETATM 8 C C8 P6G . . . C 2 -20.966 -5.707 -2.915 1 78.94 ? C8 P6G 341 A 1 HETATM 9 C C9 P6G . . . C 2 -21.192 -4.375 -3.62 1 74.66 ? C9 P6G 341 A 1 HETATM 10 O O10 P6G . . . C 2 -21.397 -4.598 -5.013 1 75.04 ? O10 P6G 341 A 1 HETATM 11 C C11 P6G . . . C 2 -20.379 -3.987 -5.805 1 81.27 ? C11 P6G 341 A 1 HETATM 12 C C12 P6G . . . C 2 -20.886 -3.783 -7.227 1 85.91 ? C12 P6G 341 A 1 HETATM 13 O O13 P6G . . . C 2 -21.397 -5.013 -7.741 1 89.13 ? O13 P6G 341 A 1 HETATM 14 C C14 P6G . . . C 2 -20.847 -5.334 -9.019 1 80.8 ? C14 P6G 341 A 1 HETATM 15 C C15 P6G . . . C 2 -21.913 -5.251 -10.112 1 76.55 ? C15 P6G 341 A 1 HETATM 16 O O16 P6G . . . C 2 -23.156 -4.788 -9.583 1 70.07 ? O16 P6G 341 A 1 HETATM 17 C C17 P6G . . . C 2 -23.476 -3.473 -10.035 1 64.36 ? C17 P6G 341 A 1 HETATM 18 C C18 P6G . . . C 2 -24.854 -3.073 -9.522 1 58.71 ? C18 P6G 341 A 1 HETATM 19 O O19 P6G . . . C 2 -25.838 -3.971 -10.048 1 64.62 ? O19 P6G 341 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 708 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 19 #