data_3HWB # _model_server_result.job_id REpwQZvZoC9ztm8LErWNPA _model_server_result.datetime_utc '2025-07-04 08:47:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hwb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":341}' # _entry.id 3HWB # _exptl.entry_id 3HWB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 85.468 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'RUBIDIUM ION' _entity.pdbx_number_of_molecules 19 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3HWB _cell.length_a 117.192 _cell.length_b 117.192 _cell.length_c 116.885 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HWB _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,X 1 1,2,3 B,R,S,T,U,V,W,Y 2 1,4,5 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 117.192 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 58.596 101.491249 0 4 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 5 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N GLY 157 A GLY 135 1_555 F RB RB . A RB 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc2 A O THR 322 A THR 300 1_555 L RB RB . A RB 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? metalc ? metalc3 F RB RB . A RB 344 1_555 X O HOH . A HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc4 B OD2 ASP 135 B ASP 113 1_555 V RB RB . B RB 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc5 B O GLU 223 B GLU 201 1_555 U RB RB . B RB 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc6 V RB RB . B RB 345 1_555 Y O HOH . B HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? # _chem_comp.formula 'Rb 1' _chem_comp.formula_weight 85.468 _chem_comp.id RB _chem_comp.mon_nstd_flag . _chem_comp.name 'RUBIDIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HWB _atom_sites.fract_transf_matrix[1][1] 0.008533 _atom_sites.fract_transf_matrix[1][2] 0.004927 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009853 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RB A 1 341 341 RB RB . D 2 RB A 1 342 342 RB RB . E 2 RB A 1 343 343 RB RB . F 2 RB A 1 344 344 RB RB . G 2 RB A 1 345 345 RB RB . H 2 RB A 1 346 346 RB RB . I 2 RB A 1 347 347 RB RB . J 2 RB A 1 348 348 RB RB . K 2 RB A 1 349 349 RB RB . L 2 RB A 1 350 350 RB RB . M 2 RB A 1 351 351 RB RB . N 2 RB A 1 352 352 RB RB . O 2 RB A 1 353 353 RB RB . P 2 RB A 1 354 354 RB RB . Q 3 P6G A 1 355 355 P6G P6G . R 2 RB B 1 341 341 RB RB . S 2 RB B 1 342 342 RB RB . T 2 RB B 1 343 343 RB RB . U 2 RB B 1 344 344 RB RB . V 2 RB B 1 345 345 RB RB . W 3 P6G B 1 346 346 P6G P6G . X 4 HOH A 1 356 356 HOH HOH . X 4 HOH A 2 357 357 HOH HOH . X 4 HOH A 3 358 358 HOH HOH . X 4 HOH A 4 359 359 HOH HOH . X 4 HOH A 5 360 360 HOH HOH . X 4 HOH A 6 361 361 HOH HOH . X 4 HOH A 7 362 362 HOH HOH . X 4 HOH A 8 363 363 HOH HOH . X 4 HOH A 9 364 364 HOH HOH . X 4 HOH A 10 365 365 HOH HOH . X 4 HOH A 11 366 366 HOH HOH . X 4 HOH A 12 367 367 HOH HOH . X 4 HOH A 13 368 368 HOH HOH . X 4 HOH A 14 369 369 HOH HOH . Y 4 HOH B 1 347 347 HOH HOH . Y 4 HOH B 2 348 348 HOH HOH . Y 4 HOH B 3 349 349 HOH HOH . Y 4 HOH B 4 350 350 HOH HOH . Y 4 HOH B 5 351 351 HOH HOH . Y 4 HOH B 6 352 352 HOH HOH . Y 4 HOH B 7 353 353 HOH HOH . Y 4 HOH B 8 354 354 HOH HOH . Y 4 HOH B 9 355 355 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol RB _atom_site.label_atom_id RB _atom_site.label_comp_id RB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.343 _atom_site.Cartn_y 13.851 _atom_site.Cartn_z 28.308 _atom_site.occupancy 0.34 _atom_site.B_iso_or_equiv 64.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id RB _atom_site.auth_comp_id RB _atom_site.auth_seq_id 341 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #