data_3HWD # _model_server_result.job_id WvrGZCFOF7e2qatulvY_WA _model_server_result.datetime_utc '2024-11-05 04:12:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hwd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":183}' # _entry.id 3HWD # _exptl.entry_id 3HWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HWD _cell.length_a 115.825 _cell.length_b 115.825 _cell.length_c 119.316 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,K 1 1 B,L 2 1 C,E,F,G,H,I,J,M 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 76 1_555 A SG CYS 195 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 96 B CYS 76 1_555 B SG CYS 195 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 C SG CYS 96 C CYS 76 1_555 C SG CYS 195 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HWD _atom_sites.fract_transf_matrix[1][1] 0.008634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NA A 1 179 1 NA NA . E 2 NA C 1 179 1 NA NA . F 2 NA C 1 180 1 NA NA . G 2 NA C 1 181 1 NA NA . H 2 NA C 1 182 1 NA NA . I 2 NA C 1 183 1 NA NA . J 2 NA C 1 184 1 NA NA . K 3 HOH A 1 180 7 HOH HOH . K 3 HOH A 2 181 9 HOH HOH . K 3 HOH A 3 182 12 HOH HOH . K 3 HOH A 4 183 14 HOH HOH . K 3 HOH A 5 184 15 HOH HOH . K 3 HOH A 6 185 16 HOH HOH . K 3 HOH A 7 186 18 HOH HOH . K 3 HOH A 8 187 23 HOH HOH . K 3 HOH A 9 188 25 HOH HOH . K 3 HOH A 10 189 29 HOH HOH . K 3 HOH A 11 190 30 HOH HOH . K 3 HOH A 12 191 31 HOH HOH . K 3 HOH A 13 192 37 HOH HOH . K 3 HOH A 14 193 38 HOH HOH . K 3 HOH A 15 194 41 HOH HOH . K 3 HOH A 16 195 43 HOH HOH . K 3 HOH A 17 196 47 HOH HOH . K 3 HOH A 18 197 49 HOH HOH . K 3 HOH A 19 198 66 HOH HOH . K 3 HOH A 20 199 67 HOH HOH . K 3 HOH A 21 200 68 HOH HOH . K 3 HOH A 22 201 72 HOH HOH . K 3 HOH A 23 202 75 HOH HOH . L 3 HOH B 1 179 22 HOH HOH . L 3 HOH B 2 180 45 HOH HOH . M 3 HOH C 1 185 1 HOH HOH . M 3 HOH C 2 186 4 HOH HOH . M 3 HOH C 3 187 5 HOH HOH . M 3 HOH C 4 188 6 HOH HOH . M 3 HOH C 5 189 8 HOH HOH . M 3 HOH C 6 190 10 HOH HOH . M 3 HOH C 7 191 11 HOH HOH . M 3 HOH C 8 192 13 HOH HOH . M 3 HOH C 9 193 17 HOH HOH . M 3 HOH C 10 194 19 HOH HOH . M 3 HOH C 11 195 20 HOH HOH . M 3 HOH C 12 196 24 HOH HOH . M 3 HOH C 13 197 26 HOH HOH . M 3 HOH C 14 198 27 HOH HOH . M 3 HOH C 15 199 28 HOH HOH . M 3 HOH C 16 200 32 HOH HOH . M 3 HOH C 17 201 33 HOH HOH . M 3 HOH C 18 202 34 HOH HOH . M 3 HOH C 19 203 35 HOH HOH . M 3 HOH C 20 204 36 HOH HOH . M 3 HOH C 21 205 39 HOH HOH . M 3 HOH C 22 206 42 HOH HOH . M 3 HOH C 23 207 44 HOH HOH . M 3 HOH C 24 208 59 HOH HOH . M 3 HOH C 25 209 61 HOH HOH . M 3 HOH C 26 210 74 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 48.088 _atom_site.Cartn_y 34.884 _atom_site.Cartn_z 26.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 183 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #