data_3HWJ # _model_server_result.job_id MmbY-nwgC1S_aniAo3bcPQ _model_server_result.datetime_utc '2024-12-26 17:48:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1}' # _entry.id 3HWJ # _exptl.entry_id 3HWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HWJ _cell.length_a 93.877 _cell.length_b 99.922 _cell.length_c 83.054 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 1745 1_555 A SG CYS 141 A CYS 1860 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.089 ? disulf ? disulf2 B SG CYS 26 B CYS 1745 1_555 B SG CYS 141 B CYS 1860 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.076 ? covale ? covale1 A C GLY 124 A GLY 1843 1_555 A N MSE 125 A MSE 1844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C MSE 125 A MSE 1844 1_555 A N THR 126 A THR 1845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 B C GLY 124 B GLY 1843 1_555 B N MSE 125 B MSE 1844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 B C MSE 125 B MSE 1844 1_555 B N THR 126 B THR 1845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 3HWJ _atom_sites.fract_transf_matrix[1][1] 0.010652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010008 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 2 2 DMS DMS . D 2 DMS B 1 1 1 DMS DMS . E 2 DMS B 1 3 3 DMS DMS . F 3 HOH A 1 1 1 HOH HOH . F 3 HOH A 2 3 3 HOH HOH . F 3 HOH A 3 5 5 HOH HOH . F 3 HOH A 4 6 6 HOH HOH . F 3 HOH A 5 7 7 HOH HOH . F 3 HOH A 6 8 8 HOH HOH . F 3 HOH A 7 10 10 HOH HOH . F 3 HOH A 8 11 11 HOH HOH . F 3 HOH A 9 12 12 HOH HOH . F 3 HOH A 10 13 13 HOH HOH . F 3 HOH A 11 14 14 HOH HOH . F 3 HOH A 12 19 19 HOH HOH . F 3 HOH A 13 20 20 HOH HOH . F 3 HOH A 14 21 21 HOH HOH . F 3 HOH A 15 24 24 HOH HOH . F 3 HOH A 16 26 26 HOH HOH . F 3 HOH A 17 27 27 HOH HOH . F 3 HOH A 18 28 28 HOH HOH . F 3 HOH A 19 31 31 HOH HOH . F 3 HOH A 20 32 32 HOH HOH . F 3 HOH A 21 39 39 HOH HOH . F 3 HOH A 22 42 42 HOH HOH . F 3 HOH A 23 43 43 HOH HOH . F 3 HOH A 24 44 44 HOH HOH . F 3 HOH A 25 46 46 HOH HOH . F 3 HOH A 26 47 47 HOH HOH . F 3 HOH A 27 48 48 HOH HOH . F 3 HOH A 28 50 50 HOH HOH . F 3 HOH A 29 51 51 HOH HOH . F 3 HOH A 30 52 52 HOH HOH . F 3 HOH A 31 54 54 HOH HOH . F 3 HOH A 32 55 55 HOH HOH . F 3 HOH A 33 59 59 HOH HOH . F 3 HOH A 34 60 60 HOH HOH . F 3 HOH A 35 61 61 HOH HOH . F 3 HOH A 36 62 62 HOH HOH . F 3 HOH A 37 63 63 HOH HOH . F 3 HOH A 38 64 64 HOH HOH . F 3 HOH A 39 65 65 HOH HOH . F 3 HOH A 40 66 66 HOH HOH . F 3 HOH A 41 67 67 HOH HOH . F 3 HOH A 42 68 68 HOH HOH . F 3 HOH A 43 73 73 HOH HOH . F 3 HOH A 44 74 74 HOH HOH . F 3 HOH A 45 76 76 HOH HOH . F 3 HOH A 46 82 82 HOH HOH . F 3 HOH A 47 83 83 HOH HOH . F 3 HOH A 48 85 85 HOH HOH . F 3 HOH A 49 86 86 HOH HOH . F 3 HOH A 50 88 88 HOH HOH . F 3 HOH A 51 89 89 HOH HOH . F 3 HOH A 52 92 92 HOH HOH . F 3 HOH A 53 94 94 HOH HOH . F 3 HOH A 54 95 95 HOH HOH . F 3 HOH A 55 96 96 HOH HOH . F 3 HOH A 56 98 98 HOH HOH . F 3 HOH A 57 99 99 HOH HOH . F 3 HOH A 58 102 102 HOH HOH . F 3 HOH A 59 112 112 HOH HOH . F 3 HOH A 60 113 113 HOH HOH . F 3 HOH A 61 114 114 HOH HOH . F 3 HOH A 62 115 115 HOH HOH . F 3 HOH A 63 116 116 HOH HOH . F 3 HOH A 64 118 118 HOH HOH . F 3 HOH A 65 119 119 HOH HOH . F 3 HOH A 66 124 124 HOH HOH . F 3 HOH A 67 1892 2 HOH HOH . G 3 HOH B 1 4 4 HOH HOH . G 3 HOH B 2 9 9 HOH HOH . G 3 HOH B 3 15 15 HOH HOH . G 3 HOH B 4 16 16 HOH HOH . G 3 HOH B 5 17 17 HOH HOH . G 3 HOH B 6 18 18 HOH HOH . G 3 HOH B 7 22 22 HOH HOH . G 3 HOH B 8 23 23 HOH HOH . G 3 HOH B 9 25 25 HOH HOH . G 3 HOH B 10 29 29 HOH HOH . G 3 HOH B 11 30 30 HOH HOH . G 3 HOH B 12 33 33 HOH HOH . G 3 HOH B 13 34 34 HOH HOH . G 3 HOH B 14 35 35 HOH HOH . G 3 HOH B 15 36 36 HOH HOH . G 3 HOH B 16 37 37 HOH HOH . G 3 HOH B 17 38 38 HOH HOH . G 3 HOH B 18 40 40 HOH HOH . G 3 HOH B 19 41 41 HOH HOH . G 3 HOH B 20 45 45 HOH HOH . G 3 HOH B 21 49 49 HOH HOH . G 3 HOH B 22 53 53 HOH HOH . G 3 HOH B 23 56 56 HOH HOH . G 3 HOH B 24 57 57 HOH HOH . G 3 HOH B 25 58 58 HOH HOH . G 3 HOH B 26 69 69 HOH HOH . G 3 HOH B 27 70 70 HOH HOH . G 3 HOH B 28 71 71 HOH HOH . G 3 HOH B 29 72 72 HOH HOH . G 3 HOH B 30 75 75 HOH HOH . G 3 HOH B 31 77 77 HOH HOH . G 3 HOH B 32 78 78 HOH HOH . G 3 HOH B 33 79 79 HOH HOH . G 3 HOH B 34 80 80 HOH HOH . G 3 HOH B 35 81 81 HOH HOH . G 3 HOH B 36 84 84 HOH HOH . G 3 HOH B 37 87 87 HOH HOH . G 3 HOH B 38 90 90 HOH HOH . G 3 HOH B 39 91 91 HOH HOH . G 3 HOH B 40 93 93 HOH HOH . G 3 HOH B 41 97 97 HOH HOH . G 3 HOH B 42 100 100 HOH HOH . G 3 HOH B 43 101 101 HOH HOH . G 3 HOH B 44 103 103 HOH HOH . G 3 HOH B 45 104 104 HOH HOH . G 3 HOH B 46 105 105 HOH HOH . G 3 HOH B 47 106 106 HOH HOH . G 3 HOH B 48 107 107 HOH HOH . G 3 HOH B 49 108 108 HOH HOH . G 3 HOH B 50 109 109 HOH HOH . G 3 HOH B 51 110 110 HOH HOH . G 3 HOH B 52 111 111 HOH HOH . G 3 HOH B 53 117 117 HOH HOH . G 3 HOH B 54 120 120 HOH HOH . G 3 HOH B 55 121 121 HOH HOH . G 3 HOH B 56 122 122 HOH HOH . G 3 HOH B 57 123 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 2 -20.637 28.965 36.893 1 54.4 ? S DMS 1 B 1 HETATM 2 O O DMS . . . D 2 -20.548 30.119 35.522 1 53.12 ? O DMS 1 B 1 HETATM 3 C C1 DMS . . . D 2 -20.602 27.222 36.356 1 54.57 ? C1 DMS 1 B 1 HETATM 4 C C2 DMS . . . D 2 -19.209 28.988 38.016 1 52.92 ? C2 DMS 1 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #