data_3HXI
#
_model_server_result.job_id            wanh0Za5h9JUhVnjYDIX-Q 
_model_server_result.datetime_utc      '2024-11-23 00:09:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hxi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    3HXI 
#
_exptl.entry_id    3HXI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              803.44 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HXI 
_cell.length_a            45.311 
_cell.length_b            125.33 
_cell.length_c            37.33 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HXI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N10 O18 P3 1' 
_chem_comp.formula_weight    803.44 
_chem_comp.id                GTG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'MRNA CAP ANALOG N7-METHYL GPPPG' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A GTG doub 129 n n 
PA O2A GTG sing 130 n n 
PA O3A GTG sing 131 n n 
PA O5D GTG sing 132 n n 
O2A HOA2 GTG sing 133 n n 
O3A PB GTG sing 134 n n 
PB O1B GTG doub 135 n n 
PB O2B GTG sing 136 n n 
PB O3B GTG sing 137 n n 
O2B HOB2 GTG sing 138 n n 
O3B PG GTG sing 139 n n 
N9A C8A GTG sing 140 n y 
N9A C4A GTG sing 141 n y 
N9A C1D GTG sing 142 n n 
C8A N7A GTG doub 143 n y 
C8A H8 GTG sing 144 n n 
N7A C7X GTG sing 145 n n 
N7A C5A GTG sing 146 n y 
C7X HC71 GTG sing 147 n n 
C7X HC72 GTG sing 148 n n 
C7X HC73 GTG sing 149 n n 
C5A C6A GTG sing 150 n n 
C5A C4A GTG doub 151 n y 
C6A O6A GTG doub 152 n n 
C6A N1A GTG sing 153 n n 
N1A C2A GTG sing 154 n n 
N1A HN1 GTG sing 155 n n 
C2A N2A GTG sing 156 n n 
C2A N3A GTG doub 157 n n 
N2A HN21 GTG sing 158 n n 
N2A HN22 GTG sing 159 n n 
N3A C4A GTG sing 160 n n 
O5D C5D GTG sing 161 n n 
C5D C4D GTG sing 162 n n 
C5D "H5'1" GTG sing 163 n n 
C5D "H5'2" GTG sing 164 n n 
C4D O4D GTG sing 165 n n 
C4D C3D GTG sing 166 n n 
C4D H4' GTG sing 167 n n 
O4D C1D GTG sing 168 n n 
C3D O3D GTG sing 169 n n 
C3D C2D GTG sing 170 n n 
C3D H3' GTG sing 171 n n 
O3D HO3' GTG sing 172 n n 
C2D O2D GTG sing 173 n n 
C2D C1D GTG sing 174 n n 
C2D H2' GTG sing 175 n n 
O2D HO2' GTG sing 176 n n 
C1D H1' GTG sing 177 n n 
PG O1G GTG doub 178 n n 
PG O2G GTG sing 179 n n 
PG O5E GTG sing 180 n n 
O2G HOG2 GTG sing 181 n n 
O5E C5E GTG sing 182 n n 
C5E C4E GTG sing 183 n n 
C5E H5B1 GTG sing 184 n n 
C5E H5B2 GTG sing 185 n n 
C4E O4E GTG sing 186 n n 
C4E C3E GTG sing 187 n n 
C4E H4B GTG sing 188 n n 
O4E C1E GTG sing 189 n n 
C3E O3E GTG sing 190 n n 
C3E C2E GTG sing 191 n n 
C3E H3B GTG sing 192 n n 
O3E H3BO GTG sing 193 n n 
C2E O2E GTG sing 194 n n 
C2E C1E GTG sing 195 n n 
C2E H2B GTG sing 196 n n 
O2E H2BO GTG sing 197 n n 
C1E N9B GTG sing 198 n n 
C1E H1B GTG sing 199 n n 
N9B C8B GTG sing 200 n y 
N9B C4B GTG sing 201 n y 
C8B N7B GTG doub 202 n y 
C8B H8B GTG sing 203 n n 
N7B C5B GTG sing 204 n y 
C5B C6B GTG sing 205 n n 
C5B C4B GTG doub 206 n y 
C6B O6B GTG doub 207 n n 
C6B N1B GTG sing 208 n n 
N1B C2B GTG sing 209 n n 
N1B H1BN GTG sing 210 n n 
C2B N2B GTG sing 211 n n 
C2B N3B GTG doub 212 n n 
N2B H2B1 GTG sing 213 n n 
N2B H2B2 GTG sing 214 n n 
N3B C4B GTG sing 215 n n 
#
_atom_sites.entry_id                     3HXI 
_atom_sites.fract_transf_matrix[1][1]    0.02207 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007979 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026788 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GTG A 1 501 501 GTG GTG . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 7 7 HOH HOH . 
D 4 HOH A 7 8 8 HOH HOH . 
D 4 HOH A 8 10 10 HOH HOH . 
D 4 HOH A 9 11 11 HOH HOH . 
D 4 HOH A 10 12 12 HOH HOH . 
D 4 HOH A 11 13 13 HOH HOH . 
D 4 HOH A 12 14 14 HOH HOH . 
D 4 HOH A 13 204 15 HOH HOH . 
D 4 HOH A 14 205 16 HOH HOH . 
D 4 HOH A 15 206 17 HOH HOH . 
D 4 HOH A 16 207 18 HOH HOH . 
D 4 HOH A 17 208 19 HOH HOH . 
D 4 HOH A 18 209 21 HOH HOH . 
D 4 HOH A 19 210 22 HOH HOH . 
D 4 HOH A 20 211 23 HOH HOH . 
D 4 HOH A 21 212 24 HOH HOH . 
D 4 HOH A 22 213 25 HOH HOH . 
D 4 HOH A 23 214 26 HOH HOH . 
D 4 HOH A 24 215 28 HOH HOH . 
D 4 HOH A 25 216 29 HOH HOH . 
D 4 HOH A 26 217 30 HOH HOH . 
D 4 HOH A 27 218 31 HOH HOH . 
D 4 HOH A 28 219 32 HOH HOH . 
D 4 HOH A 29 220 33 HOH HOH . 
D 4 HOH A 30 221 34 HOH HOH . 
D 4 HOH A 31 222 35 HOH HOH . 
D 4 HOH A 32 223 38 HOH HOH . 
D 4 HOH A 33 224 41 HOH HOH . 
D 4 HOH A 34 225 42 HOH HOH . 
D 4 HOH A 35 226 43 HOH HOH . 
D 4 HOH A 36 227 44 HOH HOH . 
D 4 HOH A 37 228 45 HOH HOH . 
D 4 HOH A 38 229 47 HOH HOH . 
D 4 HOH A 39 230 48 HOH HOH . 
D 4 HOH A 40 231 50 HOH HOH . 
D 4 HOH A 41 232 51 HOH HOH . 
D 4 HOH A 42 233 52 HOH HOH . 
D 4 HOH A 43 234 53 HOH HOH . 
D 4 HOH A 44 235 54 HOH HOH . 
D 4 HOH A 45 236 55 HOH HOH . 
D 4 HOH A 46 237 56 HOH HOH . 
D 4 HOH A 47 238 57 HOH HOH . 
D 4 HOH A 48 239 58 HOH HOH . 
D 4 HOH A 49 240 61 HOH HOH . 
D 4 HOH A 50 241 63 HOH HOH . 
D 4 HOH A 51 242 64 HOH HOH . 
D 4 HOH A 52 243 65 HOH HOH . 
D 4 HOH A 53 244 67 HOH HOH . 
D 4 HOH A 54 245 69 HOH HOH . 
D 4 HOH A 55 246 70 HOH HOH . 
D 4 HOH A 56 247 71 HOH HOH . 
D 4 HOH A 57 248 73 HOH HOH . 
D 4 HOH A 58 249 74 HOH HOH . 
D 4 HOH A 59 250 78 HOH HOH . 
D 4 HOH A 60 251 86 HOH HOH . 
D 4 HOH A 61 252 95 HOH HOH . 
D 4 HOH A 62 253 105 HOH HOH . 
D 4 HOH A 63 254 116 HOH HOH . 
D 4 HOH A 64 255 7 HOH HOH . 
D 4 HOH A 65 256 12 HOH HOH . 
D 4 HOH A 66 257 16 HOH HOH . 
D 4 HOH A 67 258 17 HOH HOH . 
D 4 HOH A 68 259 19 HOH HOH . 
D 4 HOH A 69 260 20 HOH HOH . 
D 4 HOH A 70 261 21 HOH HOH . 
D 4 HOH A 71 262 22 HOH HOH . 
D 4 HOH A 72 263 25 HOH HOH . 
D 4 HOH A 73 264 26 HOH HOH . 
D 4 HOH A 74 265 28 HOH HOH . 
D 4 HOH A 75 266 30 HOH HOH . 
D 4 HOH A 76 267 33 HOH HOH . 
D 4 HOH A 77 268 35 HOH HOH . 
D 4 HOH A 78 269 37 HOH HOH . 
D 4 HOH A 79 270 38 HOH HOH . 
D 4 HOH A 80 271 43 HOH HOH . 
D 4 HOH A 81 272 44 HOH HOH . 
D 4 HOH A 82 273 45 HOH HOH . 
D 4 HOH A 83 274 47 HOH HOH . 
D 4 HOH A 84 275 52 HOH HOH . 
D 4 HOH A 85 276 56 HOH HOH . 
D 4 HOH A 86 277 62 HOH HOH . 
D 4 HOH A 87 278 71 HOH HOH . 
D 4 HOH A 88 279 79 HOH HOH . 
D 4 HOH A 89 280 81 HOH HOH . 
D 4 HOH A 90 281 93 HOH HOH . 
D 4 HOH A 91 282 94 HOH HOH . 
D 4 HOH A 92 283 98 HOH HOH . 
D 4 HOH A 93 284 99 HOH HOH . 
D 4 HOH A 94 285 100 HOH HOH . 
D 4 HOH A 95 286 102 HOH HOH . 
D 4 HOH A 96 287 114 HOH HOH . 
D 4 HOH A 97 288 115 HOH HOH . 
D 4 HOH A 98 289 117 HOH HOH . 
D 4 HOH A 99 290 72 HOH HOH . 
E 4 HOH C 1 23 23 HOH HOH . 
E 4 HOH C 2 27 27 HOH HOH . 
E 4 HOH C 3 28 6 HOH HOH . 
E 4 HOH C 4 29 29 HOH HOH . 
E 4 HOH C 5 36 36 HOH HOH . 
E 4 HOH C 6 37 37 HOH HOH . 
E 4 HOH C 7 60 60 HOH HOH . 
E 4 HOH C 8 62 62 HOH HOH . 
E 4 HOH C 9 68 68 HOH HOH . 
E 4 HOH C 10 80 80 HOH HOH . 
E 4 HOH C 11 85 85 HOH HOH . 
E 4 HOH C 12 96 96 HOH HOH . 
E 4 HOH C 13 116 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA GTG . . . C 3 35.061 18.607 3.412 1 21.25 ? PA GTG 501 A 1 
HETATM 2 O O1A GTG . . . C 3 34.737 17.935 2.105 1 20.05 ? O1A GTG 501 A 1 
HETATM 3 O O2A GTG . . . C 3 33.985 18.963 4.415 1 23.21 ? O2A GTG 501 A 1 
HETATM 4 O O3A GTG . . . C 3 36.217 17.845 4.225 1 21.39 ? O3A GTG 501 A 1 
HETATM 5 P PB GTG . . . C 3 36.833 16.396 3.998 1 22.28 ? PB GTG 501 A 1 
HETATM 6 O O1B GTG . . . C 3 35.756 15.34 3.96 1 21.88 ? O1B GTG 501 A 1 
HETATM 7 O O2B GTG . . . C 3 37.963 16.28 5.016 1 20.6 ? O2B GTG 501 A 1 
HETATM 8 O O3B GTG . . . C 3 37.525 16.592 2.56 1 20.52 ? O3B GTG 501 A 1 
HETATM 9 N N9A GTG . . . C 3 34.9 23.706 1.771 1 21.8 ? N9A GTG 501 A 1 
HETATM 10 C C8A GTG . . . C 3 33.986 22.941 2.377 1 20.77 ? C8A GTG 501 A 1 
HETATM 11 N N7A GTG . . . C 3 32.876 23.682 2.594 1 20.35 ? N7A GTG 501 A 1 
HETATM 12 C C7X GTG . . . C 3 31.651 23.156 3.246 1 20.75 ? C7X GTG 501 A 1 
HETATM 13 C C5A GTG . . . C 3 33.114 24.907 2.119 1 20.56 ? C5A GTG 501 A 1 
HETATM 14 C C6A GTG . . . C 3 32.318 26.058 2.085 1 22.64 ? C6A GTG 501 A 1 
HETATM 15 O O6A GTG . . . C 3 31.152 26.096 2.542 1 20.99 ? O6A GTG 501 A 1 
HETATM 16 N N1A GTG . . . C 3 32.855 27.181 1.546 1 22.15 ? N1A GTG 501 A 1 
HETATM 17 C C2A GTG . . . C 3 34.126 27.16 1.033 1 22.57 ? C2A GTG 501 A 1 
HETATM 18 N N2A GTG . . . C 3 34.679 28.258 0.487 1 22.37 ? N2A GTG 501 A 1 
HETATM 19 N N3A GTG . . . C 3 34.887 26.043 1.065 1 21.59 ? N3A GTG 501 A 1 
HETATM 20 C C4A GTG . . . C 3 34.384 24.916 1.598 1 21.15 ? C4A GTG 501 A 1 
HETATM 21 O O5D GTG . . . C 3 35.763 19.976 3.036 1 21.02 ? O5D GTG 501 A 1 
HETATM 22 C C5D GTG . . . C 3 36.933 19.952 2.225 1 20.59 ? C5D GTG 501 A 1 
HETATM 23 C C4D GTG . . . C 3 37.341 21.371 1.898 1 21.64 ? C4D GTG 501 A 1 
HETATM 24 O O4D GTG . . . C 3 36.348 21.944 1.059 1 20.99 ? O4D GTG 501 A 1 
HETATM 25 C C3D GTG . . . C 3 37.425 22.283 3.105 1 23.31 ? C3D GTG 501 A 1 
HETATM 26 O O3D GTG . . . C 3 38.67 22.133 3.784 1 22.81 ? O3D GTG 501 A 1 
HETATM 27 C C2D GTG . . . C 3 37.256 23.641 2.467 1 23.34 ? C2D GTG 501 A 1 
HETATM 28 O O2D GTG . . . C 3 38.504 24.073 1.904 1 23.97 ? O2D GTG 501 A 1 
HETATM 29 C C1D GTG . . . C 3 36.272 23.341 1.342 1 22.42 ? C1D GTG 501 A 1 
HETATM 30 P PG GTG . . . C 3 38.179 15.455 1.632 1 21.25 ? PG GTG 501 A 1 
HETATM 31 O O1G GTG . . . C 3 37.695 14.077 1.954 1 21.42 ? O1G GTG 501 A 1 
HETATM 32 O O2G GTG . . . C 3 39.671 15.724 1.541 1 22.85 ? O2G GTG 501 A 1 
HETATM 33 O O5E GTG . . . C 3 37.548 15.892 0.22 1 22.25 ? O5E GTG 501 A 1 
HETATM 34 C C5E GTG . . . C 3 36.168 15.656 -0.053 1 20.85 ? C5E GTG 501 A 1 
HETATM 35 C C4E GTG . . . C 3 35.848 16.065 -1.476 1 22.56 ? C4E GTG 501 A 1 
HETATM 36 O O4E GTG . . . C 3 36.057 17.474 -1.608 1 21.11 ? O4E GTG 501 A 1 
HETATM 37 C C3E GTG . . . C 3 36.761 15.416 -2.5 1 23.3 ? C3E GTG 501 A 1 
HETATM 38 O O3E GTG . . . C 3 36.019 15.331 -3.728 1 24.31 ? O3E GTG 501 A 1 
HETATM 39 C C2E GTG . . . C 3 37.886 16.422 -2.697 1 22.62 ? C2E GTG 501 A 1 
HETATM 40 O O2E GTG . . . C 3 38.52 16.311 -3.982 1 22.59 ? O2E GTG 501 A 1 
HETATM 41 C C1E GTG . . . C 3 37.107 17.723 -2.563 1 24.52 ? C1E GTG 501 A 1 
HETATM 42 N N9B GTG . . . C 3 37.839 18.909 -2.076 1 24.29 ? N9B GTG 501 A 1 
HETATM 43 C C8B GTG . . . C 3 38.411 18.764 -0.758 1 26.24 ? C8B GTG 501 A 1 
HETATM 44 N N7B GTG . . . C 3 38.996 20.087 -0.564 1 26.72 ? N7B GTG 501 A 1 
HETATM 45 C C5B GTG . . . C 3 38.712 20.849 -1.663 1 26.85 ? C5B GTG 501 A 1 
HETATM 46 C C6B GTG . . . C 3 39.021 22.241 -2.035 1 27.7 ? C6B GTG 501 A 1 
HETATM 47 O O6B GTG . . . C 3 39.678 22.937 -1.215 1 26.9 ? O6B GTG 501 A 1 
HETATM 48 N N1B GTG . . . C 3 38.595 22.69 -3.25 1 26.77 ? N1B GTG 501 A 1 
HETATM 49 C C2B GTG . . . C 3 37.88 21.891 -4.115 1 27.23 ? C2B GTG 501 A 1 
HETATM 50 N N2B GTG . . . C 3 37.455 22.357 -5.316 1 26.1 ? N2B GTG 501 A 1 
HETATM 51 N N3B GTG . . . C 3 37.561 20.605 -3.829 1 26.54 ? N3B GTG 501 A 1 
HETATM 52 C C4B GTG . . . C 3 37.937 20.074 -2.648 1 25.36 ? C4B GTG 501 A 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           52 
#