data_3HYI # _model_server_result.job_id sKgYgFuZuSfGocCPXRy-EQ _model_server_result.datetime_utc '2024-11-05 00:33:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hyi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":297}' # _entry.id 3HYI # _exptl.entry_id 3HYI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HYI _cell.length_a 51.648 _cell.length_b 61.303 _cell.length_c 97.215 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HYI _atom_sites.fract_transf_matrix[1][1] 0.019362 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010286 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 3731 3731 GOL GOL . C 2 GOL A 1 296 3731 GOL GOL . D 3 NA A 1 297 1 NA NA . E 4 HOH A 1 298 2 HOH HOH . E 4 HOH A 2 299 3 HOH HOH . E 4 HOH A 3 300 4 HOH HOH . E 4 HOH A 4 301 5 HOH HOH . E 4 HOH A 5 302 6 HOH HOH . E 4 HOH A 6 303 7 HOH HOH . E 4 HOH A 7 304 8 HOH HOH . E 4 HOH A 8 305 11 HOH HOH . E 4 HOH A 9 306 12 HOH HOH . E 4 HOH A 10 307 13 HOH HOH . E 4 HOH A 11 308 14 HOH HOH . E 4 HOH A 12 309 15 HOH HOH . E 4 HOH A 13 310 16 HOH HOH . E 4 HOH A 14 311 17 HOH HOH . E 4 HOH A 15 312 19 HOH HOH . E 4 HOH A 16 313 20 HOH HOH . E 4 HOH A 17 314 21 HOH HOH . E 4 HOH A 18 315 23 HOH HOH . E 4 HOH A 19 316 28 HOH HOH . E 4 HOH A 20 317 31 HOH HOH . E 4 HOH A 21 318 34 HOH HOH . E 4 HOH A 22 319 36 HOH HOH . E 4 HOH A 23 320 37 HOH HOH . E 4 HOH A 24 321 39 HOH HOH . E 4 HOH A 25 322 40 HOH HOH . E 4 HOH A 26 323 41 HOH HOH . E 4 HOH A 27 324 43 HOH HOH . E 4 HOH A 28 325 44 HOH HOH . E 4 HOH A 29 326 45 HOH HOH . E 4 HOH A 30 327 49 HOH HOH . E 4 HOH A 31 328 50 HOH HOH . E 4 HOH A 32 329 51 HOH HOH . E 4 HOH A 33 330 52 HOH HOH . E 4 HOH A 34 331 53 HOH HOH . E 4 HOH A 35 332 56 HOH HOH . E 4 HOH A 36 333 58 HOH HOH . E 4 HOH A 37 334 61 HOH HOH . E 4 HOH A 38 335 63 HOH HOH . E 4 HOH A 39 336 64 HOH HOH . E 4 HOH A 40 337 65 HOH HOH . E 4 HOH A 41 338 66 HOH HOH . E 4 HOH A 42 339 68 HOH HOH . E 4 HOH A 43 340 69 HOH HOH . E 4 HOH A 44 341 70 HOH HOH . E 4 HOH A 45 342 71 HOH HOH . E 4 HOH A 46 343 73 HOH HOH . E 4 HOH A 47 344 76 HOH HOH . E 4 HOH A 48 345 77 HOH HOH . E 4 HOH A 49 346 79 HOH HOH . E 4 HOH A 50 347 80 HOH HOH . E 4 HOH A 51 348 81 HOH HOH . E 4 HOH A 52 349 82 HOH HOH . E 4 HOH A 53 350 83 HOH HOH . E 4 HOH A 54 351 84 HOH HOH . E 4 HOH A 55 352 85 HOH HOH . E 4 HOH A 56 353 86 HOH HOH . E 4 HOH A 57 354 87 HOH HOH . E 4 HOH A 58 355 88 HOH HOH . E 4 HOH A 59 356 89 HOH HOH . E 4 HOH A 60 357 90 HOH HOH . E 4 HOH A 61 358 91 HOH HOH . E 4 HOH A 62 359 92 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 35.609 _atom_site.Cartn_y -66.346 _atom_site.Cartn_z -11.891 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 297 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #