data_3HYI
#
_model_server_result.job_id            6ZtmWQKxV5G0BvB7Wh_0xg 
_model_server_result.datetime_utc      '2024-11-05 00:33:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3hyi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":3731}' 
#
_entry.id    3HYI 
#
_exptl.entry_id    3HYI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3HYI 
_cell.length_a            51.648 
_cell.length_b            61.303 
_cell.length_c            97.215 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3HYI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     3HYI 
_atom_sites.fract_transf_matrix[1][1]    0.019362 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016312 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010286 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 3731 3731 GOL GOL . 
C 2 GOL A 1 296 3731 GOL GOL . 
D 3 NA A 1 297 1 NA NA . 
E 4 HOH A 1 298 2 HOH HOH . 
E 4 HOH A 2 299 3 HOH HOH . 
E 4 HOH A 3 300 4 HOH HOH . 
E 4 HOH A 4 301 5 HOH HOH . 
E 4 HOH A 5 302 6 HOH HOH . 
E 4 HOH A 6 303 7 HOH HOH . 
E 4 HOH A 7 304 8 HOH HOH . 
E 4 HOH A 8 305 11 HOH HOH . 
E 4 HOH A 9 306 12 HOH HOH . 
E 4 HOH A 10 307 13 HOH HOH . 
E 4 HOH A 11 308 14 HOH HOH . 
E 4 HOH A 12 309 15 HOH HOH . 
E 4 HOH A 13 310 16 HOH HOH . 
E 4 HOH A 14 311 17 HOH HOH . 
E 4 HOH A 15 312 19 HOH HOH . 
E 4 HOH A 16 313 20 HOH HOH . 
E 4 HOH A 17 314 21 HOH HOH . 
E 4 HOH A 18 315 23 HOH HOH . 
E 4 HOH A 19 316 28 HOH HOH . 
E 4 HOH A 20 317 31 HOH HOH . 
E 4 HOH A 21 318 34 HOH HOH . 
E 4 HOH A 22 319 36 HOH HOH . 
E 4 HOH A 23 320 37 HOH HOH . 
E 4 HOH A 24 321 39 HOH HOH . 
E 4 HOH A 25 322 40 HOH HOH . 
E 4 HOH A 26 323 41 HOH HOH . 
E 4 HOH A 27 324 43 HOH HOH . 
E 4 HOH A 28 325 44 HOH HOH . 
E 4 HOH A 29 326 45 HOH HOH . 
E 4 HOH A 30 327 49 HOH HOH . 
E 4 HOH A 31 328 50 HOH HOH . 
E 4 HOH A 32 329 51 HOH HOH . 
E 4 HOH A 33 330 52 HOH HOH . 
E 4 HOH A 34 331 53 HOH HOH . 
E 4 HOH A 35 332 56 HOH HOH . 
E 4 HOH A 36 333 58 HOH HOH . 
E 4 HOH A 37 334 61 HOH HOH . 
E 4 HOH A 38 335 63 HOH HOH . 
E 4 HOH A 39 336 64 HOH HOH . 
E 4 HOH A 40 337 65 HOH HOH . 
E 4 HOH A 41 338 66 HOH HOH . 
E 4 HOH A 42 339 68 HOH HOH . 
E 4 HOH A 43 340 69 HOH HOH . 
E 4 HOH A 44 341 70 HOH HOH . 
E 4 HOH A 45 342 71 HOH HOH . 
E 4 HOH A 46 343 73 HOH HOH . 
E 4 HOH A 47 344 76 HOH HOH . 
E 4 HOH A 48 345 77 HOH HOH . 
E 4 HOH A 49 346 79 HOH HOH . 
E 4 HOH A 50 347 80 HOH HOH . 
E 4 HOH A 51 348 81 HOH HOH . 
E 4 HOH A 52 349 82 HOH HOH . 
E 4 HOH A 53 350 83 HOH HOH . 
E 4 HOH A 54 351 84 HOH HOH . 
E 4 HOH A 55 352 85 HOH HOH . 
E 4 HOH A 56 353 86 HOH HOH . 
E 4 HOH A 57 354 87 HOH HOH . 
E 4 HOH A 58 355 88 HOH HOH . 
E 4 HOH A 59 356 89 HOH HOH . 
E 4 HOH A 60 357 90 HOH HOH . 
E 4 HOH A 61 358 91 HOH HOH . 
E 4 HOH A 62 359 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 11.393 -4.238 -13.718 1 52.17 ? C1 GOL 3731 A 1 
HETATM 2 O O1 GOL . . . B 2 12.046 -3.372 -12.816 1 52.22 ? O1 GOL 3731 A 1 
HETATM 3 C C2 GOL . . . B 2 12.071 -4.173 -15.084 1 52.1 ? C2 GOL 3731 A 1 
HETATM 4 O O2 GOL . . . B 2 11.805 -5.352 -15.809 1 52.01 ? O2 GOL 3731 A 1 
HETATM 5 C C3 GOL . . . B 2 11.599 -2.942 -15.858 1 52.28 ? C3 GOL 3731 A 1 
HETATM 6 O O3 GOL . . . B 2 10.769 -3.304 -16.941 1 52.73 ? O3 GOL 3731 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           230 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#