data_3HYZ # _model_server_result.job_id q3XHTQucYkH7K9YrL69sWQ _model_server_result.datetime_utc '2024-12-26 19:24:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":237}' # _entry.id 3HYZ # _exptl.entry_id 3HYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.18 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-dimethyl-7H-purin-6-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HYZ _cell.length_a 64.49 _cell.length_b 89.25 _cell.length_c 98.956 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1,2 B,D,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 64.49 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H9 N5' _chem_comp.formula_weight 163.18 _chem_comp.id 42C _chem_comp.mon_nstd_flag . _chem_comp.name N,N-dimethyl-7H-purin-6-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 42C doub 1 n y C1 N10 42C sing 2 n n C1 N6 42C sing 3 n y C2 C3 42C sing 4 n y C2 N7 42C sing 5 n y C3 N4 42C doub 6 n y C3 N9 42C sing 7 n y C5 N6 42C doub 8 n y C5 N4 42C sing 9 n y C8 N9 42C doub 10 n y C8 N7 42C sing 11 n y C11 N10 42C sing 12 n n C12 N10 42C sing 13 n n C5 H5 42C sing 14 n n C8 H8 42C sing 15 n n C11 H11 42C sing 16 n n C11 H11A 42C sing 17 n n C11 H11B 42C sing 18 n n C12 H12 42C sing 19 n n C12 H12A 42C sing 20 n n C12 H12B 42C sing 21 n n N7 HN7 42C sing 22 n n # _atom_sites.entry_id 3HYZ _atom_sites.fract_transf_matrix[1][1] 0.015506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011205 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 42C A 1 237 2 42C 42C . D 2 42C B 1 237 1 42C 42C . E 3 HOH A 1 238 5 HOH HOH . E 3 HOH A 2 239 8 HOH HOH . E 3 HOH A 3 240 9 HOH HOH . E 3 HOH A 4 241 11 HOH HOH . E 3 HOH A 5 242 13 HOH HOH . E 3 HOH A 6 243 15 HOH HOH . E 3 HOH A 7 244 16 HOH HOH . E 3 HOH A 8 245 19 HOH HOH . E 3 HOH A 9 246 20 HOH HOH . E 3 HOH A 10 247 21 HOH HOH . E 3 HOH A 11 248 22 HOH HOH . E 3 HOH A 12 249 23 HOH HOH . E 3 HOH A 13 250 24 HOH HOH . E 3 HOH A 14 251 25 HOH HOH . E 3 HOH A 15 252 27 HOH HOH . E 3 HOH A 16 253 31 HOH HOH . E 3 HOH A 17 254 32 HOH HOH . E 3 HOH A 18 255 33 HOH HOH . E 3 HOH A 19 256 34 HOH HOH . E 3 HOH A 20 257 38 HOH HOH . E 3 HOH A 21 258 41 HOH HOH . E 3 HOH A 22 259 42 HOH HOH . E 3 HOH A 23 260 44 HOH HOH . E 3 HOH A 24 261 47 HOH HOH . E 3 HOH A 25 262 48 HOH HOH . E 3 HOH A 26 263 49 HOH HOH . E 3 HOH A 27 264 52 HOH HOH . E 3 HOH A 28 265 56 HOH HOH . E 3 HOH A 29 266 58 HOH HOH . E 3 HOH A 30 267 62 HOH HOH . E 3 HOH A 31 268 65 HOH HOH . E 3 HOH A 32 269 66 HOH HOH . E 3 HOH A 33 270 73 HOH HOH . E 3 HOH A 34 271 78 HOH HOH . E 3 HOH A 35 272 83 HOH HOH . E 3 HOH A 36 273 84 HOH HOH . E 3 HOH A 37 274 86 HOH HOH . E 3 HOH A 38 275 88 HOH HOH . E 3 HOH A 39 276 89 HOH HOH . E 3 HOH A 40 277 91 HOH HOH . E 3 HOH A 41 278 92 HOH HOH . E 3 HOH A 42 279 94 HOH HOH . E 3 HOH A 43 280 95 HOH HOH . E 3 HOH A 44 281 96 HOH HOH . E 3 HOH A 45 282 97 HOH HOH . E 3 HOH A 46 283 98 HOH HOH . E 3 HOH A 47 284 100 HOH HOH . E 3 HOH A 48 285 102 HOH HOH . E 3 HOH A 49 286 106 HOH HOH . E 3 HOH A 50 287 109 HOH HOH . E 3 HOH A 51 288 110 HOH HOH . E 3 HOH A 52 289 112 HOH HOH . E 3 HOH A 53 290 117 HOH HOH . E 3 HOH A 54 291 121 HOH HOH . E 3 HOH A 55 292 122 HOH HOH . E 3 HOH A 56 293 126 HOH HOH . E 3 HOH A 57 294 127 HOH HOH . E 3 HOH A 58 295 132 HOH HOH . E 3 HOH A 59 296 133 HOH HOH . E 3 HOH A 60 297 134 HOH HOH . E 3 HOH A 61 298 136 HOH HOH . E 3 HOH A 62 299 137 HOH HOH . E 3 HOH A 63 300 147 HOH HOH . E 3 HOH A 64 301 148 HOH HOH . E 3 HOH A 65 302 150 HOH HOH . E 3 HOH A 66 303 154 HOH HOH . E 3 HOH A 67 304 157 HOH HOH . E 3 HOH A 68 305 159 HOH HOH . E 3 HOH A 69 306 160 HOH HOH . E 3 HOH A 70 307 161 HOH HOH . E 3 HOH A 71 308 163 HOH HOH . E 3 HOH A 72 309 164 HOH HOH . E 3 HOH A 73 310 165 HOH HOH . E 3 HOH A 74 311 168 HOH HOH . E 3 HOH A 75 312 169 HOH HOH . E 3 HOH A 76 313 171 HOH HOH . E 3 HOH A 77 314 172 HOH HOH . E 3 HOH A 78 315 175 HOH HOH . E 3 HOH A 79 316 176 HOH HOH . E 3 HOH A 80 317 177 HOH HOH . E 3 HOH A 81 318 180 HOH HOH . E 3 HOH A 82 319 185 HOH HOH . E 3 HOH A 83 320 194 HOH HOH . E 3 HOH A 84 321 195 HOH HOH . E 3 HOH A 85 322 199 HOH HOH . E 3 HOH A 86 323 206 HOH HOH . E 3 HOH A 87 324 208 HOH HOH . E 3 HOH A 88 325 211 HOH HOH . E 3 HOH A 89 326 213 HOH HOH . E 3 HOH A 90 327 214 HOH HOH . E 3 HOH A 91 328 216 HOH HOH . F 3 HOH B 1 238 1 HOH HOH . F 3 HOH B 2 239 2 HOH HOH . F 3 HOH B 3 240 3 HOH HOH . F 3 HOH B 4 241 4 HOH HOH . F 3 HOH B 5 242 6 HOH HOH . F 3 HOH B 6 243 7 HOH HOH . F 3 HOH B 7 244 10 HOH HOH . F 3 HOH B 8 245 12 HOH HOH . F 3 HOH B 9 246 14 HOH HOH . F 3 HOH B 10 247 17 HOH HOH . F 3 HOH B 11 248 18 HOH HOH . F 3 HOH B 12 249 26 HOH HOH . F 3 HOH B 13 250 28 HOH HOH . F 3 HOH B 14 251 29 HOH HOH . F 3 HOH B 15 252 30 HOH HOH . F 3 HOH B 16 253 35 HOH HOH . F 3 HOH B 17 254 36 HOH HOH . F 3 HOH B 18 255 37 HOH HOH . F 3 HOH B 19 256 39 HOH HOH . F 3 HOH B 20 257 40 HOH HOH . F 3 HOH B 21 258 43 HOH HOH . F 3 HOH B 22 259 45 HOH HOH . F 3 HOH B 23 260 46 HOH HOH . F 3 HOH B 24 261 50 HOH HOH . F 3 HOH B 25 262 51 HOH HOH . F 3 HOH B 26 263 53 HOH HOH . F 3 HOH B 27 264 54 HOH HOH . F 3 HOH B 28 265 55 HOH HOH . F 3 HOH B 29 266 57 HOH HOH . F 3 HOH B 30 267 59 HOH HOH . F 3 HOH B 31 268 60 HOH HOH . F 3 HOH B 32 269 61 HOH HOH . F 3 HOH B 33 270 63 HOH HOH . F 3 HOH B 34 271 64 HOH HOH . F 3 HOH B 35 272 67 HOH HOH . F 3 HOH B 36 273 68 HOH HOH . F 3 HOH B 37 274 69 HOH HOH . F 3 HOH B 38 275 70 HOH HOH . F 3 HOH B 39 276 71 HOH HOH . F 3 HOH B 40 277 72 HOH HOH . F 3 HOH B 41 278 74 HOH HOH . F 3 HOH B 42 279 75 HOH HOH . F 3 HOH B 43 280 76 HOH HOH . F 3 HOH B 44 281 77 HOH HOH . F 3 HOH B 45 282 79 HOH HOH . F 3 HOH B 46 283 80 HOH HOH . F 3 HOH B 47 284 81 HOH HOH . F 3 HOH B 48 285 82 HOH HOH . F 3 HOH B 49 286 85 HOH HOH . F 3 HOH B 50 287 87 HOH HOH . F 3 HOH B 51 288 90 HOH HOH . F 3 HOH B 52 289 93 HOH HOH . F 3 HOH B 53 290 99 HOH HOH . F 3 HOH B 54 291 101 HOH HOH . F 3 HOH B 55 292 103 HOH HOH . F 3 HOH B 56 293 104 HOH HOH . F 3 HOH B 57 294 105 HOH HOH . F 3 HOH B 58 295 107 HOH HOH . F 3 HOH B 59 296 108 HOH HOH . F 3 HOH B 60 297 111 HOH HOH . F 3 HOH B 61 298 113 HOH HOH . F 3 HOH B 62 299 114 HOH HOH . F 3 HOH B 63 300 115 HOH HOH . F 3 HOH B 64 301 116 HOH HOH . F 3 HOH B 65 302 118 HOH HOH . F 3 HOH B 66 303 119 HOH HOH . F 3 HOH B 67 304 120 HOH HOH . F 3 HOH B 68 305 123 HOH HOH . F 3 HOH B 69 306 124 HOH HOH . F 3 HOH B 70 307 125 HOH HOH . F 3 HOH B 71 308 128 HOH HOH . F 3 HOH B 72 309 129 HOH HOH . F 3 HOH B 73 310 130 HOH HOH . F 3 HOH B 74 311 131 HOH HOH . F 3 HOH B 75 312 135 HOH HOH . F 3 HOH B 76 313 138 HOH HOH . F 3 HOH B 77 314 139 HOH HOH . F 3 HOH B 78 315 140 HOH HOH . F 3 HOH B 79 316 141 HOH HOH . F 3 HOH B 80 317 142 HOH HOH . F 3 HOH B 81 318 143 HOH HOH . F 3 HOH B 82 319 144 HOH HOH . F 3 HOH B 83 320 145 HOH HOH . F 3 HOH B 84 321 146 HOH HOH . F 3 HOH B 85 322 149 HOH HOH . F 3 HOH B 86 323 151 HOH HOH . F 3 HOH B 87 324 152 HOH HOH . F 3 HOH B 88 325 153 HOH HOH . F 3 HOH B 89 326 155 HOH HOH . F 3 HOH B 90 327 156 HOH HOH . F 3 HOH B 91 328 158 HOH HOH . F 3 HOH B 92 329 162 HOH HOH . F 3 HOH B 93 330 166 HOH HOH . F 3 HOH B 94 331 167 HOH HOH . F 3 HOH B 95 332 170 HOH HOH . F 3 HOH B 96 333 173 HOH HOH . F 3 HOH B 97 334 174 HOH HOH . F 3 HOH B 98 335 178 HOH HOH . F 3 HOH B 99 336 179 HOH HOH . F 3 HOH B 100 337 181 HOH HOH . F 3 HOH B 101 338 182 HOH HOH . F 3 HOH B 102 339 183 HOH HOH . F 3 HOH B 103 340 184 HOH HOH . F 3 HOH B 104 341 186 HOH HOH . F 3 HOH B 105 342 187 HOH HOH . F 3 HOH B 106 343 188 HOH HOH . F 3 HOH B 107 344 189 HOH HOH . F 3 HOH B 108 345 190 HOH HOH . F 3 HOH B 109 346 191 HOH HOH . F 3 HOH B 110 347 192 HOH HOH . F 3 HOH B 111 348 193 HOH HOH . F 3 HOH B 112 349 196 HOH HOH . F 3 HOH B 113 350 197 HOH HOH . F 3 HOH B 114 351 198 HOH HOH . F 3 HOH B 115 352 200 HOH HOH . F 3 HOH B 116 353 201 HOH HOH . F 3 HOH B 117 354 202 HOH HOH . F 3 HOH B 118 355 203 HOH HOH . F 3 HOH B 119 356 204 HOH HOH . F 3 HOH B 120 357 205 HOH HOH . F 3 HOH B 121 358 207 HOH HOH . F 3 HOH B 122 359 209 HOH HOH . F 3 HOH B 123 360 210 HOH HOH . F 3 HOH B 124 361 212 HOH HOH . F 3 HOH B 125 362 215 HOH HOH . F 3 HOH B 126 363 217 HOH HOH . F 3 HOH B 127 364 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 42C . . . D 2 30.022 10.407 50.344 1 15.16 ? C1 42C 237 B 1 HETATM 2 C C2 42C . . . D 2 28.858 10.847 49.561 1 15.59 ? C2 42C 237 B 1 HETATM 3 C C3 42C . . . D 2 27.57 10.713 50.207 1 15.27 ? C3 42C 237 B 1 HETATM 4 C C5 42C . . . D 2 28.54 9.869 52.107 1 14.47 ? C5 42C 237 B 1 HETATM 5 C C8 42C . . . D 2 27.241 11.515 48.229 1 18.71 ? C8 42C 237 B 1 HETATM 6 C C11 42C . . . D 2 32.37 9.899 50.768 1 12.5 ? C11 42C 237 B 1 HETATM 7 C C12 42C . . . D 2 31.734 11.047 48.608 1 10.45 ? C12 42C 237 B 1 HETATM 8 N N10 42C . . . D 2 31.353 10.46 49.89 1 12.68 ? N10 42C 237 B 1 HETATM 9 N N6 42C . . . D 2 29.771 9.929 51.584 1 15.87 ? N6 42C 237 B 1 HETATM 10 N N4 42C . . . D 2 27.448 10.238 51.451 1 15.33 ? N4 42C 237 B 1 HETATM 11 N N9 42C . . . D 2 26.6 11.126 49.363 1 17.28 ? N9 42C 237 B 1 HETATM 12 N N7 42C . . . D 2 28.603 11.345 48.34 1 20.25 ? N7 42C 237 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #