data_3HZF # _model_server_result.job_id MEuhagoUE8N-xGz-ZWEBJg _model_server_result.datetime_utc '2024-12-26 13:52:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hzf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3HZF # _exptl.entry_id 3HZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.402 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{4-[4-hydroxy-3-(1-methylethyl)benzyl]-3,5-dimethylphenoxy}acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.17 _cell.angle_gamma 90 _cell.entry_id 3HZF _cell.length_a 89.799 _cell.length_b 78.777 _cell.length_c 43.071 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 102 A PRO 243 1_555 A N CAS 103 A CAS 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A C CAS 103 A CAS 244 1_555 A N GLU 104 A GLU 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale3 A C LEU 192 A LEU 333 1_555 A N CAS 193 A CAS 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C CAS 193 A CAS 334 1_555 A N VAL 194 A VAL 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C ALA 238 A ALA 379 1_555 A N CAS 239 A CAS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C CAS 239 A CAS 380 1_555 A N HIS 240 A HIS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C GLU 250 A GLU 391 1_555 A N CAS 251 A CAS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C CAS 251 A CAS 392 1_555 A N PRO 252 A PRO 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C20 H24 O4' _chem_comp.formula_weight 328.402 _chem_comp.id B72 _chem_comp.mon_nstd_flag . _chem_comp.name '{4-[4-hydroxy-3-(1-methylethyl)benzyl]-3,5-dimethylphenoxy}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 O2 B72 doub 70 n n C20 O1 B72 sing 71 n n C19 C20 B72 sing 72 n n C19 H119 B72 sing 73 n n C19 H219 B72 sing 74 n n O3 C19 B72 sing 75 n n C1 O3 B72 sing 76 n n C2 C1 B72 sing 77 n y C2 H2 B72 sing 78 n n C3 C2 B72 doub 79 n y C17 C3 B72 sing 80 n n C17 H117 B72 sing 81 n n C17 H217 B72 sing 82 n n C17 H317 B72 sing 83 n n C4 C5 B72 doub 84 n y C4 C3 B72 sing 85 n y C5 C6 B72 sing 86 n y C6 C1 B72 doub 87 n y C6 H6 B72 sing 88 n n C18 C5 B72 sing 89 n n C18 H118 B72 sing 90 n n C18 H218 B72 sing 91 n n C18 H318 B72 sing 92 n n C7 C4 B72 sing 93 n n C7 H17 B72 sing 94 n n C7 H27 B72 sing 95 n n C8 C9 B72 sing 96 n y C8 C7 B72 sing 97 n n C13 C8 B72 doub 98 n y C13 H13 B72 sing 99 n n C12 C11 B72 doub 100 n y C12 C13 B72 sing 101 n y C14 C12 B72 sing 102 n n C14 C15 B72 sing 103 n n C14 H14 B72 sing 104 n n C16 C14 B72 sing 105 n n C16 H116 B72 sing 106 n n C16 H216 B72 sing 107 n n C16 H316 B72 sing 108 n n C15 H115 B72 sing 109 n n C15 H215 B72 sing 110 n n C15 H315 B72 sing 111 n n C11 C10 B72 sing 112 n y O4 C11 B72 sing 113 n n O4 HO4 B72 sing 114 n n C10 C9 B72 doub 115 n y C10 H10 B72 sing 116 n n C9 H9 B72 sing 117 n n O1 H24 B72 sing 118 n n # _atom_sites.entry_id 3HZF _atom_sites.fract_transf_matrix[1][1] 0.011136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001008 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B72 A 1 1 1 B72 B72 . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 13 13 HOH HOH . C 3 HOH A 12 14 14 HOH HOH . C 3 HOH A 13 15 15 HOH HOH . C 3 HOH A 14 16 16 HOH HOH . C 3 HOH A 15 17 17 HOH HOH . C 3 HOH A 16 18 18 HOH HOH . C 3 HOH A 17 19 19 HOH HOH . C 3 HOH A 18 20 20 HOH HOH . C 3 HOH A 19 411 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 B72 . . . B 2 19.491 7.229 12.853 1 20.76 ? O1 B72 1 A 1 HETATM 2 C C20 B72 . . . B 2 18.593 7.286 11.982 1 19 ? C20 B72 1 A 1 HETATM 3 O O2 B72 . . . B 2 17.39 7.444 12.236 1 22.39 ? O2 B72 1 A 1 HETATM 4 C C19 B72 . . . B 2 18.935 7.154 10.538 1 18.78 ? C19 B72 1 A 1 HETATM 5 O O3 B72 . . . B 2 18.939 8.479 9.996 1 20.06 ? O3 B72 1 A 1 HETATM 6 C C1 B72 . . . B 2 19.335 8.654 8.707 1 17.86 ? C1 B72 1 A 1 HETATM 7 C C2 B72 . . . B 2 19.771 9.893 8.327 1 18.16 ? C2 B72 1 A 1 HETATM 8 C C3 B72 . . . B 2 20.203 10.12 7.018 1 18.08 ? C3 B72 1 A 1 HETATM 9 C C17 B72 . . . B 2 20.653 11.497 6.602 1 16.65 ? C17 B72 1 A 1 HETATM 10 C C4 B72 . . . B 2 20.18 9.011 6.039 1 19.15 ? C4 B72 1 A 1 HETATM 11 C C5 B72 . . . B 2 19.673 7.685 6.495 1 18.13 ? C5 B72 1 A 1 HETATM 12 C C6 B72 . . . B 2 19.282 7.583 7.815 1 19.14 ? C6 B72 1 A 1 HETATM 13 C C18 B72 . . . B 2 19.609 6.455 5.631 1 16.1 ? C18 B72 1 A 1 HETATM 14 C C7 B72 . . . B 2 20.568 9.29 4.599 1 20.96 ? C7 B72 1 A 1 HETATM 15 C C8 B72 . . . B 2 21.99 9.326 4.116 1 20.63 ? C8 B72 1 A 1 HETATM 16 C C13 B72 . . . B 2 22.332 10.369 3.262 1 19 ? C13 B72 1 A 1 HETATM 17 C C12 B72 . . . B 2 23.618 10.431 2.731 1 18.62 ? C12 B72 1 A 1 HETATM 18 C C14 B72 . . . B 2 24.078 11.578 1.875 1 15.45 ? C14 B72 1 A 1 HETATM 19 C C16 B72 . . . B 2 23.227 11.792 0.642 1 15.27 ? C16 B72 1 A 1 HETATM 20 C C15 B72 . . . B 2 24.131 12.841 2.732 1 12.92 ? C15 B72 1 A 1 HETATM 21 C C11 B72 . . . B 2 24.568 9.345 3.091 1 18.93 ? C11 B72 1 A 1 HETATM 22 O O4 B72 . . . B 2 25.827 9.365 2.639 1 21.15 ? O4 B72 1 A 1 HETATM 23 C C10 B72 . . . B 2 24.156 8.305 3.916 1 20.71 ? C10 B72 1 A 1 HETATM 24 C C9 B72 . . . B 2 22.872 8.292 4.433 1 22.14 ? C9 B72 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #