data_3HZM # _model_server_result.job_id nx62cejr9DzmYDUhfqjW4Q _model_server_result.datetime_utc '2025-08-31 22:17:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3hzm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":217}' # _entry.id 3HZM # _exptl.entry_id 3HZM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3HZM _cell.length_a 46 _cell.length_b 81.8 _cell.length_c 127.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3HZM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 94 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 139 A CYS 133 1_555 A SG CYS 199 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 152 B CYS 139 1_555 B SG CYS 207 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A OE2 GLU 61 A GLU 55 1_555 C MG MG . A MG 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc2 A ND2 ASN 143 A ASN 137 1_555 D MG MG . A MG 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc3 C MG MG . A MG 214 1_555 H O HOH . A HOH 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc4 D MG MG . A MG 216 1_555 H O HOH . A HOH 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc5 D MG MG . A MG 216 1_555 H O HOH . A HOH 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc6 D MG MG . A MG 216 1_555 H O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc7 B OE2 GLU 61 B GLU 58 1_555 F ZN ZN . B ZN 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3HZM _atom_sites.fract_transf_matrix[1][1] 0.021739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007814 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 214 214 MG MG . D 3 MG A 1 216 216 MG MG . E 3 MG A 1 217 217 MG MG . F 4 ZN B 1 215 215 ZN ZN . G 5 KDO B 1 303 303 KDO KDO . H 6 HOH A 1 215 215 HOH HOH . H 6 HOH A 2 218 1 HOH HOH . H 6 HOH A 3 219 219 HOH HOH . H 6 HOH A 4 220 3 HOH HOH . H 6 HOH A 5 221 4 HOH HOH . H 6 HOH A 6 222 5 HOH HOH . H 6 HOH A 7 223 11 HOH HOH . H 6 HOH A 8 224 12 HOH HOH . H 6 HOH A 9 225 13 HOH HOH . H 6 HOH A 10 226 14 HOH HOH . H 6 HOH A 11 227 227 HOH HOH . H 6 HOH A 12 228 16 HOH HOH . H 6 HOH A 13 229 17 HOH HOH . H 6 HOH A 14 230 18 HOH HOH . H 6 HOH A 15 231 21 HOH HOH . H 6 HOH A 16 232 22 HOH HOH . H 6 HOH A 17 233 24 HOH HOH . H 6 HOH A 18 234 234 HOH HOH . H 6 HOH A 19 235 235 HOH HOH . H 6 HOH A 20 236 25 HOH HOH . H 6 HOH A 21 237 237 HOH HOH . H 6 HOH A 22 238 238 HOH HOH . H 6 HOH A 23 239 239 HOH HOH . H 6 HOH A 24 240 240 HOH HOH . H 6 HOH A 25 241 26 HOH HOH . H 6 HOH A 26 242 242 HOH HOH . H 6 HOH A 27 243 27 HOH HOH . H 6 HOH A 28 244 244 HOH HOH . H 6 HOH A 29 245 245 HOH HOH . H 6 HOH A 30 246 246 HOH HOH . H 6 HOH A 31 247 247 HOH HOH . H 6 HOH A 32 248 31 HOH HOH . H 6 HOH A 33 249 32 HOH HOH . H 6 HOH A 34 250 33 HOH HOH . H 6 HOH A 35 251 34 HOH HOH . H 6 HOH A 36 252 252 HOH HOH . H 6 HOH A 37 253 35 HOH HOH . H 6 HOH A 38 254 36 HOH HOH . H 6 HOH A 39 255 37 HOH HOH . H 6 HOH A 40 256 256 HOH HOH . H 6 HOH A 41 257 257 HOH HOH . H 6 HOH A 42 258 39 HOH HOH . H 6 HOH A 43 259 259 HOH HOH . H 6 HOH A 44 260 42 HOH HOH . H 6 HOH A 45 261 43 HOH HOH . H 6 HOH A 46 262 262 HOH HOH . H 6 HOH A 47 263 44 HOH HOH . H 6 HOH A 48 264 45 HOH HOH . H 6 HOH A 49 265 51 HOH HOH . H 6 HOH A 50 266 266 HOH HOH . H 6 HOH A 51 267 54 HOH HOH . H 6 HOH A 52 268 61 HOH HOH . H 6 HOH A 53 269 269 HOH HOH . H 6 HOH A 54 270 69 HOH HOH . H 6 HOH A 55 271 271 HOH HOH . H 6 HOH A 56 272 272 HOH HOH . H 6 HOH A 57 273 273 HOH HOH . H 6 HOH A 58 274 274 HOH HOH . H 6 HOH A 59 275 275 HOH HOH . H 6 HOH A 60 276 276 HOH HOH . H 6 HOH A 61 277 277 HOH HOH . H 6 HOH A 62 278 70 HOH HOH . H 6 HOH A 63 279 72 HOH HOH . H 6 HOH A 64 280 74 HOH HOH . H 6 HOH A 65 281 75 HOH HOH . H 6 HOH A 66 282 76 HOH HOH . H 6 HOH A 67 283 77 HOH HOH . H 6 HOH A 68 284 78 HOH HOH . H 6 HOH A 69 285 81 HOH HOH . H 6 HOH A 70 286 84 HOH HOH . H 6 HOH A 71 287 85 HOH HOH . H 6 HOH A 72 288 87 HOH HOH . H 6 HOH A 73 289 88 HOH HOH . H 6 HOH A 74 290 90 HOH HOH . H 6 HOH A 75 291 91 HOH HOH . H 6 HOH A 76 292 92 HOH HOH . H 6 HOH A 77 293 93 HOH HOH . H 6 HOH A 78 294 94 HOH HOH . H 6 HOH A 79 295 97 HOH HOH . H 6 HOH A 80 296 98 HOH HOH . H 6 HOH A 81 297 100 HOH HOH . H 6 HOH A 82 298 102 HOH HOH . H 6 HOH A 83 299 104 HOH HOH . H 6 HOH A 84 300 107 HOH HOH . H 6 HOH A 85 301 108 HOH HOH . H 6 HOH A 86 302 109 HOH HOH . H 6 HOH A 87 303 110 HOH HOH . H 6 HOH A 88 304 111 HOH HOH . H 6 HOH A 89 305 113 HOH HOH . H 6 HOH A 90 306 115 HOH HOH . H 6 HOH A 91 307 117 HOH HOH . H 6 HOH A 92 308 121 HOH HOH . H 6 HOH A 93 309 127 HOH HOH . H 6 HOH A 94 310 129 HOH HOH . H 6 HOH A 95 311 130 HOH HOH . H 6 HOH A 96 312 132 HOH HOH . H 6 HOH A 97 313 133 HOH HOH . H 6 HOH A 98 314 134 HOH HOH . H 6 HOH A 99 315 135 HOH HOH . H 6 HOH A 100 316 136 HOH HOH . H 6 HOH A 101 317 138 HOH HOH . H 6 HOH A 102 318 144 HOH HOH . H 6 HOH A 103 319 148 HOH HOH . H 6 HOH A 104 320 150 HOH HOH . H 6 HOH A 105 321 152 HOH HOH . H 6 HOH A 106 322 156 HOH HOH . H 6 HOH A 107 323 158 HOH HOH . H 6 HOH A 108 324 160 HOH HOH . H 6 HOH A 109 325 163 HOH HOH . H 6 HOH A 110 326 164 HOH HOH . H 6 HOH A 111 327 167 HOH HOH . H 6 HOH A 112 328 168 HOH HOH . H 6 HOH A 113 329 170 HOH HOH . H 6 HOH A 114 330 171 HOH HOH . H 6 HOH A 115 331 172 HOH HOH . H 6 HOH A 116 332 176 HOH HOH . H 6 HOH A 117 333 177 HOH HOH . H 6 HOH A 118 334 179 HOH HOH . H 6 HOH A 119 335 185 HOH HOH . H 6 HOH A 120 336 189 HOH HOH . H 6 HOH A 121 337 192 HOH HOH . H 6 HOH A 122 338 193 HOH HOH . H 6 HOH A 123 339 194 HOH HOH . H 6 HOH A 124 340 195 HOH HOH . H 6 HOH A 125 341 197 HOH HOH . H 6 HOH A 126 342 203 HOH HOH . H 6 HOH A 127 343 204 HOH HOH . H 6 HOH A 128 344 206 HOH HOH . H 6 HOH A 129 345 208 HOH HOH . H 6 HOH A 130 346 209 HOH HOH . H 6 HOH A 131 347 210 HOH HOH . H 6 HOH A 132 348 211 HOH HOH . H 6 HOH A 133 349 213 HOH HOH . H 6 HOH A 134 350 214 HOH HOH . I 6 HOH B 1 213 2 HOH HOH . I 6 HOH B 2 214 6 HOH HOH . I 6 HOH B 3 216 216 HOH HOH . I 6 HOH B 4 217 217 HOH HOH . I 6 HOH B 5 218 218 HOH HOH . I 6 HOH B 6 219 7 HOH HOH . I 6 HOH B 7 220 220 HOH HOH . I 6 HOH B 8 221 221 HOH HOH . I 6 HOH B 9 222 222 HOH HOH . I 6 HOH B 10 223 223 HOH HOH . I 6 HOH B 11 224 224 HOH HOH . I 6 HOH B 12 225 225 HOH HOH . I 6 HOH B 13 226 226 HOH HOH . I 6 HOH B 14 227 8 HOH HOH . I 6 HOH B 15 228 228 HOH HOH . I 6 HOH B 16 229 229 HOH HOH . I 6 HOH B 17 230 230 HOH HOH . I 6 HOH B 18 231 231 HOH HOH . I 6 HOH B 19 232 232 HOH HOH . I 6 HOH B 20 233 233 HOH HOH . I 6 HOH B 21 234 9 HOH HOH . I 6 HOH B 22 235 10 HOH HOH . I 6 HOH B 23 236 236 HOH HOH . I 6 HOH B 24 237 15 HOH HOH . I 6 HOH B 25 238 19 HOH HOH . I 6 HOH B 26 239 20 HOH HOH . I 6 HOH B 27 240 23 HOH HOH . I 6 HOH B 28 241 241 HOH HOH . I 6 HOH B 29 242 28 HOH HOH . I 6 HOH B 30 243 243 HOH HOH . I 6 HOH B 31 244 29 HOH HOH . I 6 HOH B 32 245 30 HOH HOH . I 6 HOH B 33 246 38 HOH HOH . I 6 HOH B 34 247 40 HOH HOH . I 6 HOH B 35 248 248 HOH HOH . I 6 HOH B 36 249 249 HOH HOH . I 6 HOH B 37 250 250 HOH HOH . I 6 HOH B 38 251 251 HOH HOH . I 6 HOH B 39 252 41 HOH HOH . I 6 HOH B 40 253 253 HOH HOH . I 6 HOH B 41 254 254 HOH HOH . I 6 HOH B 42 255 255 HOH HOH . I 6 HOH B 43 256 46 HOH HOH . I 6 HOH B 44 257 47 HOH HOH . I 6 HOH B 45 258 258 HOH HOH . I 6 HOH B 46 259 48 HOH HOH . I 6 HOH B 47 260 260 HOH HOH . I 6 HOH B 48 261 261 HOH HOH . I 6 HOH B 49 262 49 HOH HOH . I 6 HOH B 50 263 263 HOH HOH . I 6 HOH B 51 264 264 HOH HOH . I 6 HOH B 52 265 265 HOH HOH . I 6 HOH B 53 266 50 HOH HOH . I 6 HOH B 54 267 267 HOH HOH . I 6 HOH B 55 268 268 HOH HOH . I 6 HOH B 56 269 52 HOH HOH . I 6 HOH B 57 270 270 HOH HOH . I 6 HOH B 58 271 53 HOH HOH . I 6 HOH B 59 272 55 HOH HOH . I 6 HOH B 60 273 56 HOH HOH . I 6 HOH B 61 274 57 HOH HOH . I 6 HOH B 62 275 58 HOH HOH . I 6 HOH B 63 276 59 HOH HOH . I 6 HOH B 64 277 60 HOH HOH . I 6 HOH B 65 278 278 HOH HOH . I 6 HOH B 66 279 62 HOH HOH . I 6 HOH B 67 280 63 HOH HOH . I 6 HOH B 68 281 64 HOH HOH . I 6 HOH B 69 282 65 HOH HOH . I 6 HOH B 70 283 66 HOH HOH . I 6 HOH B 71 284 67 HOH HOH . I 6 HOH B 72 285 68 HOH HOH . I 6 HOH B 73 286 71 HOH HOH . I 6 HOH B 74 287 73 HOH HOH . I 6 HOH B 75 288 79 HOH HOH . I 6 HOH B 76 289 80 HOH HOH . I 6 HOH B 77 290 82 HOH HOH . I 6 HOH B 78 291 83 HOH HOH . I 6 HOH B 79 292 86 HOH HOH . I 6 HOH B 80 293 89 HOH HOH . I 6 HOH B 81 294 95 HOH HOH . I 6 HOH B 82 295 96 HOH HOH . I 6 HOH B 83 296 99 HOH HOH . I 6 HOH B 84 297 101 HOH HOH . I 6 HOH B 85 298 103 HOH HOH . I 6 HOH B 86 299 105 HOH HOH . I 6 HOH B 87 300 106 HOH HOH . I 6 HOH B 88 301 112 HOH HOH . I 6 HOH B 89 302 114 HOH HOH . I 6 HOH B 90 304 116 HOH HOH . I 6 HOH B 91 305 118 HOH HOH . I 6 HOH B 92 306 119 HOH HOH . I 6 HOH B 93 307 120 HOH HOH . I 6 HOH B 94 308 122 HOH HOH . I 6 HOH B 95 309 123 HOH HOH . I 6 HOH B 96 310 124 HOH HOH . I 6 HOH B 97 311 125 HOH HOH . I 6 HOH B 98 312 126 HOH HOH . I 6 HOH B 99 313 128 HOH HOH . I 6 HOH B 100 314 131 HOH HOH . I 6 HOH B 101 315 137 HOH HOH . I 6 HOH B 102 316 139 HOH HOH . I 6 HOH B 103 317 140 HOH HOH . I 6 HOH B 104 318 141 HOH HOH . I 6 HOH B 105 319 142 HOH HOH . I 6 HOH B 106 320 143 HOH HOH . I 6 HOH B 107 321 145 HOH HOH . I 6 HOH B 108 322 146 HOH HOH . I 6 HOH B 109 323 147 HOH HOH . I 6 HOH B 110 324 149 HOH HOH . I 6 HOH B 111 325 151 HOH HOH . I 6 HOH B 112 326 153 HOH HOH . I 6 HOH B 113 327 154 HOH HOH . I 6 HOH B 114 328 155 HOH HOH . I 6 HOH B 115 329 157 HOH HOH . I 6 HOH B 116 330 159 HOH HOH . I 6 HOH B 117 331 161 HOH HOH . I 6 HOH B 118 332 162 HOH HOH . I 6 HOH B 119 333 165 HOH HOH . I 6 HOH B 120 334 166 HOH HOH . I 6 HOH B 121 335 169 HOH HOH . I 6 HOH B 122 336 173 HOH HOH . I 6 HOH B 123 337 174 HOH HOH . I 6 HOH B 124 338 175 HOH HOH . I 6 HOH B 125 339 178 HOH HOH . I 6 HOH B 126 340 180 HOH HOH . I 6 HOH B 127 341 181 HOH HOH . I 6 HOH B 128 342 182 HOH HOH . I 6 HOH B 129 343 183 HOH HOH . I 6 HOH B 130 344 184 HOH HOH . I 6 HOH B 131 345 186 HOH HOH . I 6 HOH B 132 346 187 HOH HOH . I 6 HOH B 133 347 188 HOH HOH . I 6 HOH B 134 348 190 HOH HOH . I 6 HOH B 135 349 191 HOH HOH . I 6 HOH B 136 350 196 HOH HOH . I 6 HOH B 137 351 198 HOH HOH . I 6 HOH B 138 352 199 HOH HOH . I 6 HOH B 139 353 200 HOH HOH . I 6 HOH B 140 354 201 HOH HOH . I 6 HOH B 141 355 202 HOH HOH . I 6 HOH B 142 356 205 HOH HOH . I 6 HOH B 143 357 207 HOH HOH . I 6 HOH B 144 358 212 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.296 _atom_site.Cartn_y 3.269 _atom_site.Cartn_z -63.192 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 217 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 394 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #