data_3I0A # _model_server_result.job_id nmMFn-1fnSdaGlSvsxWFeQ _model_server_result.datetime_utc '2024-10-18 04:27:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":181}' # _entry.id 3I0A # _exptl.entry_id 3I0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.352 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-[(2R)-2-amino-3-(D-seryloxy)propanoyl]-N-[(2,3-dihydroxyphenyl)carbonyl]-L-serine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I0A _cell.length_a 114.253 _cell.length_b 114.253 _cell.length_c 117.95 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,O 1 1 B,H,I,P 2 1 C,J,K,L,M,N,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 76 1_555 A SG CYS 195 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 96 B CYS 76 1_555 B SG CYS 195 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 96 C CYS 76 1_555 C SG CYS 195 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 E FE FE . A FE 180 1_555 F O6 3ET . A 3ET 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc2 E FE FE . A FE 180 1_555 F O3 3ET . A 3ET 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc3 E FE FE . A FE 180 1_555 G O6 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc4 E FE FE . A FE 180 1_555 G O4 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc5 E FE FE . A FE 180 1_555 G O1 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc6 E FE FE . A FE 180 1_555 G O3 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc7 H FE FE . B FE 179 1_555 I O3 DBH . B DBH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc8 H FE FE . B FE 179 1_555 I O6 DBH . B DBH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc9 K FE FE . C FE 180 1_555 N O48 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc10 K FE FE . C FE 180 1_555 N O49 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc11 K FE FE . C FE 180 1_555 N O3 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc12 K FE FE . C FE 180 1_555 N O4 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc13 K FE FE . C FE 180 1_555 N O6 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc14 K FE FE . C FE 180 1_555 N O1 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 ? # _chem_comp.formula 'C16 H21 N3 O10' _chem_comp.formula_weight 415.352 _chem_comp.id 3ET _chem_comp.mon_nstd_flag . _chem_comp.name O-[(2R)-2-amino-3-(D-seryloxy)propanoyl]-N-[(2,3-dihydroxyphenyl)carbonyl]-L-serine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 O35 3ET doub 55 n n O33 C34 3ET sing 56 n n C34 C36 3ET sing 57 n n C38 C36 3ET sing 58 n n C36 N37 3ET sing 59 n n C36 H36 3ET sing 60 n n C38 O39 3ET sing 61 n n C38 H38 3ET sing 62 n n C38 H38A 3ET sing 63 n n O39 HO39 3ET sing 64 n n N37 HN37 3ET sing 65 n n N37 HN3A 3ET sing 66 n n C32 O33 3ET sing 67 n n C22 C32 3ET sing 68 n n C32 H32 3ET sing 69 n n C32 H32A 3ET sing 70 n n N1 C22 3ET sing 71 n n C22 C25 3ET sing 72 n n C22 H22 3ET sing 73 n n N1 HN1 3ET sing 74 n n N1 HN1A 3ET sing 75 n n C25 O15 3ET sing 76 n n C25 O10 3ET doub 77 n n O15 C30 3ET sing 78 n n C30 C24 3ET sing 79 n n C30 H30 3ET sing 80 n n C30 H30A 3ET sing 81 n n N3 C24 3ET sing 82 n n C24 C27 3ET sing 83 n n C24 H24 3ET sing 84 n n C27 O14 3ET doub 85 n n C27 O12 3ET sing 86 n n O12 HO12 3ET sing 87 n n C21 N3 3ET sing 88 n n N3 HN3 3ET sing 89 n n C18 C21 3ET sing 90 n n O9 C21 3ET doub 91 n n C15 C18 3ET doub 92 n y C18 C3 3ET sing 93 n y C6 C3 3ET doub 94 n y C3 O3 3ET sing 95 n n O3 HO3 3ET sing 96 n n C9 C6 3ET sing 97 n y C6 O6 3ET sing 98 n n O6 HO6 3ET sing 99 n n C12 C9 3ET doub 100 n y C9 H9 3ET sing 101 n n C12 C15 3ET sing 102 n y C12 H12 3ET sing 103 n n C15 H15 3ET sing 104 n n # _atom_sites.entry_id 3I0A _atom_sites.fract_transf_matrix[1][1] 0.008753 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 179 1 SO4 SO4 . E 3 FE A 1 180 1 FE FE . F 4 3ET A 1 181 1 3ET 3ET . G 5 2DS A 1 182 1 2DS 2DS . H 3 FE B 1 179 1 FE FE . I 6 DBH B 1 180 1 DBH DBH . J 2 SO4 C 1 179 3 SO4 SO4 . K 3 FE C 1 180 1 FE FE . L 7 GOL C 1 181 2 GOL GOL . M 7 GOL C 1 182 3 GOL GOL . N 8 MCJ C 1 183 1 MCJ MCC . O 9 HOH A 1 183 2 HOH HOH . O 9 HOH A 2 184 5 HOH HOH . O 9 HOH A 3 185 7 HOH HOH . O 9 HOH A 4 186 9 HOH HOH . O 9 HOH A 5 187 10 HOH HOH . O 9 HOH A 6 188 12 HOH HOH . O 9 HOH A 7 189 15 HOH HOH . O 9 HOH A 8 190 19 HOH HOH . O 9 HOH A 9 191 23 HOH HOH . O 9 HOH A 10 192 35 HOH HOH . O 9 HOH A 11 193 37 HOH HOH . O 9 HOH A 12 194 39 HOH HOH . O 9 HOH A 13 195 50 HOH HOH . O 9 HOH A 14 196 55 HOH HOH . O 9 HOH A 15 197 56 HOH HOH . O 9 HOH A 16 198 58 HOH HOH . O 9 HOH A 17 199 62 HOH HOH . O 9 HOH A 18 200 64 HOH HOH . O 9 HOH A 19 201 65 HOH HOH . O 9 HOH A 20 202 67 HOH HOH . O 9 HOH A 21 203 71 HOH HOH . O 9 HOH A 22 204 72 HOH HOH . O 9 HOH A 23 205 78 HOH HOH . O 9 HOH A 24 206 79 HOH HOH . O 9 HOH A 25 207 101 HOH HOH . O 9 HOH A 26 208 107 HOH HOH . O 9 HOH A 27 209 115 HOH HOH . O 9 HOH A 28 210 120 HOH HOH . O 9 HOH A 29 211 121 HOH HOH . O 9 HOH A 30 212 124 HOH HOH . O 9 HOH A 31 213 128 HOH HOH . O 9 HOH A 32 214 131 HOH HOH . O 9 HOH A 33 215 134 HOH HOH . O 9 HOH A 34 216 135 HOH HOH . O 9 HOH A 35 217 143 HOH HOH . O 9 HOH A 36 218 146 HOH HOH . O 9 HOH A 37 219 147 HOH HOH . O 9 HOH A 38 220 148 HOH HOH . P 9 HOH B 1 181 82 HOH HOH . P 9 HOH B 2 182 93 HOH HOH . P 9 HOH B 3 183 112 HOH HOH . P 9 HOH B 4 184 136 HOH HOH . P 9 HOH B 5 185 144 HOH HOH . Q 9 HOH C 1 184 3 HOH HOH . Q 9 HOH C 2 185 4 HOH HOH . Q 9 HOH C 3 186 8 HOH HOH . Q 9 HOH C 4 187 11 HOH HOH . Q 9 HOH C 5 188 13 HOH HOH . Q 9 HOH C 6 189 14 HOH HOH . Q 9 HOH C 7 190 16 HOH HOH . Q 9 HOH C 8 191 17 HOH HOH . Q 9 HOH C 9 192 21 HOH HOH . Q 9 HOH C 10 193 22 HOH HOH . Q 9 HOH C 11 194 24 HOH HOH . Q 9 HOH C 12 195 25 HOH HOH . Q 9 HOH C 13 196 27 HOH HOH . Q 9 HOH C 14 197 28 HOH HOH . Q 9 HOH C 15 198 30 HOH HOH . Q 9 HOH C 16 199 31 HOH HOH . Q 9 HOH C 17 200 33 HOH HOH . Q 9 HOH C 18 201 34 HOH HOH . Q 9 HOH C 19 202 36 HOH HOH . Q 9 HOH C 20 203 38 HOH HOH . Q 9 HOH C 21 204 41 HOH HOH . Q 9 HOH C 22 205 42 HOH HOH . Q 9 HOH C 23 206 43 HOH HOH . Q 9 HOH C 24 207 44 HOH HOH . Q 9 HOH C 25 208 45 HOH HOH . Q 9 HOH C 26 209 46 HOH HOH . Q 9 HOH C 27 210 47 HOH HOH . Q 9 HOH C 28 211 48 HOH HOH . Q 9 HOH C 29 212 49 HOH HOH . Q 9 HOH C 30 213 51 HOH HOH . Q 9 HOH C 31 214 52 HOH HOH . Q 9 HOH C 32 215 54 HOH HOH . Q 9 HOH C 33 216 60 HOH HOH . Q 9 HOH C 34 217 61 HOH HOH . Q 9 HOH C 35 218 68 HOH HOH . Q 9 HOH C 36 219 69 HOH HOH . Q 9 HOH C 37 220 70 HOH HOH . Q 9 HOH C 38 221 80 HOH HOH . Q 9 HOH C 39 222 85 HOH HOH . Q 9 HOH C 40 223 91 HOH HOH . Q 9 HOH C 41 224 99 HOH HOH . Q 9 HOH C 42 225 104 HOH HOH . Q 9 HOH C 43 226 105 HOH HOH . Q 9 HOH C 44 227 106 HOH HOH . Q 9 HOH C 45 228 108 HOH HOH . Q 9 HOH C 46 229 111 HOH HOH . Q 9 HOH C 47 230 116 HOH HOH . Q 9 HOH C 48 231 127 HOH HOH . Q 9 HOH C 49 232 129 HOH HOH . Q 9 HOH C 50 233 137 HOH HOH . Q 9 HOH C 51 234 138 HOH HOH . Q 9 HOH C 52 235 139 HOH HOH . Q 9 HOH C 53 236 140 HOH HOH . Q 9 HOH C 54 237 141 HOH HOH . Q 9 HOH C 55 238 142 HOH HOH . Q 9 HOH C 56 239 145 HOH HOH . Q 9 HOH C 57 240 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O35 3ET . . . F 4 33.447 77.603 65.657 1 60.66 ? O35 3ET 181 A 1 HETATM 2 C C34 3ET . . . F 4 34.384 77.54 64.876 1 59.7 ? C34 3ET 181 A 1 HETATM 3 C C36 3ET . . . F 4 35.654 76.851 65.268 1 59.97 ? C36 3ET 181 A 1 HETATM 4 C C38 3ET . . . F 4 36.838 77.797 65.129 1 60.29 ? C38 3ET 181 A 1 HETATM 5 O O39 3ET . . . F 4 38.013 77.184 65.679 1 60.52 ? O39 3ET 181 A 1 HETATM 6 N N37 3ET . . . F 4 35.556 76.411 66.646 1 60.71 ? N37 3ET 181 A 1 HETATM 7 O O33 3ET . . . F 4 34.257 78.135 63.554 1 58.23 ? O33 3ET 181 A 1 HETATM 8 C C32 3ET . . . F 4 33.203 77.729 62.681 1 57.02 ? C32 3ET 181 A 1 HETATM 9 C C22 3ET . . . F 4 32.255 78.893 62.407 1 56.26 ? C22 3ET 181 A 1 HETATM 10 N N1 3ET . . . F 4 31.064 78.386 61.747 1 55.76 ? N1 3ET 181 A 1 HETATM 11 C C25 3ET . . . F 4 31.89 79.554 63.704 1 55.27 ? C25 3ET 181 A 1 HETATM 12 O O10 3ET . . . F 4 31.143 78.971 64.478 1 55.34 ? O10 3ET 181 A 1 HETATM 13 O O15 3ET . . . F 4 32.433 80.866 64.06 1 53.28 ? O15 3ET 181 A 1 HETATM 14 C C30 3ET . . . F 4 31.611 82.028 64.197 1 51.85 ? C30 3ET 181 A 1 HETATM 15 C C24 3ET . . . F 4 30.39 81.74 65.086 1 50.99 ? C24 3ET 181 A 1 HETATM 16 C C27 3ET . . . F 4 29.782 82.973 65.693 1 51.79 ? C27 3ET 181 A 1 HETATM 17 O O14 3ET . . . F 4 28.533 83.089 65.718 1 51.88 ? O14 3ET 181 A 1 HETATM 18 O O12 3ET . . . F 4 30.548 83.835 66.17 1 53.56 ? O12 3ET 181 A 1 HETATM 19 N N3 3ET . . . F 4 29.42 81.021 64.264 1 48.84 ? N3 3ET 181 A 1 HETATM 20 C C21 3ET . . . F 4 28.953 81.439 63.086 1 45.95 ? C21 3ET 181 A 1 HETATM 21 O O9 3ET . . . F 4 29.276 82.498 62.565 1 45.66 ? O9 3ET 181 A 1 HETATM 22 C C18 3ET . . . F 4 27.961 80.58 62.376 1 43.07 ? C18 3ET 181 A 1 HETATM 23 C C3 3ET . . . F 4 27.714 79.285 62.798 1 42.09 ? C3 3ET 181 A 1 HETATM 24 O O3 3ET . . . F 4 28.372 78.754 63.869 1 41.76 ? O3 3ET 181 A 1 HETATM 25 C C6 3ET . . . F 4 26.788 78.512 62.131 1 41.37 ? C6 3ET 181 A 1 HETATM 26 O O6 3ET . . . F 4 26.563 77.243 62.564 1 41.58 ? O6 3ET 181 A 1 HETATM 27 C C9 3ET . . . F 4 26.102 79.031 61.039 1 41.33 ? C9 3ET 181 A 1 HETATM 28 C C12 3ET . . . F 4 26.35 80.331 60.613 1 41.54 ? C12 3ET 181 A 1 HETATM 29 C C15 3ET . . . F 4 27.282 81.106 61.285 1 41.94 ? C15 3ET 181 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 29 #