data_3I0A
#
_model_server_result.job_id            '_CsW4_I5KjHzZLKg5z9mBg' 
_model_server_result.datetime_utc      '2024-10-18 04:20:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3i0a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":182}' 
#
_entry.id    3I0A 
#
_exptl.entry_id    3I0A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3I0A 
_cell.length_a            114.253 
_cell.length_b            114.253 
_cell.length_c            117.95 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3I0A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,O 1 1 
B,H,I,P 2 1 
C,J,K,L,M,N,Q 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 L N N 
? 7 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 76 1_555 A SG CYS 195 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 B SG CYS 96 B CYS 76 1_555 B SG CYS 195 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 C SG CYS 96 C CYS 76 1_555 C SG CYS 195 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 E FE FE . A FE 180 1_555 F O6 3ET . A 3ET 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? 
metalc ? metalc2 E FE FE . A FE 180 1_555 F O3 3ET . A 3ET 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? 
metalc ? metalc3 E FE FE . A FE 180 1_555 G O6 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc4 E FE FE . A FE 180 1_555 G O4 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? 
metalc ? metalc5 E FE FE . A FE 180 1_555 G O1 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc6 E FE FE . A FE 180 1_555 G O3 2DS . A 2DS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc7 H FE FE . B FE 179 1_555 I O3 DBH . B DBH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc8 H FE FE . B FE 179 1_555 I O6 DBH . B DBH 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc9 K FE FE . C FE 180 1_555 N O48 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc10 K FE FE . C FE 180 1_555 N O49 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc11 K FE FE . C FE 180 1_555 N O3 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc12 K FE FE . C FE 180 1_555 N O4 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc13 K FE FE . C FE 180 1_555 N O6 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc14 K FE FE . C FE 180 1_555 N O1 MCJ . C MCJ 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 250 n n 
C1 C2 GOL sing 251 n n 
C1 H11 GOL sing 252 n n 
C1 H12 GOL sing 253 n n 
O1 HO1 GOL sing 254 n n 
C2 O2 GOL sing 255 n n 
C2 C3 GOL sing 256 n n 
C2 H2 GOL sing 257 n n 
O2 HO2 GOL sing 258 n n 
C3 O3 GOL sing 259 n n 
C3 H31 GOL sing 260 n n 
C3 H32 GOL sing 261 n n 
O3 HO3 GOL sing 262 n n 
#
_atom_sites.entry_id                     3I0A 
_atom_sites.fract_transf_matrix[1][1]    0.008753 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008753 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008478 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 SO4 A 1 179 1 SO4 SO4 . 
E 3 FE A 1 180 1 FE FE . 
F 4 3ET A 1 181 1 3ET 3ET . 
G 5 2DS A 1 182 1 2DS 2DS . 
H 3 FE B 1 179 1 FE FE . 
I 6 DBH B 1 180 1 DBH DBH . 
J 2 SO4 C 1 179 3 SO4 SO4 . 
K 3 FE C 1 180 1 FE FE . 
L 7 GOL C 1 181 2 GOL GOL . 
M 7 GOL C 1 182 3 GOL GOL . 
N 8 MCJ C 1 183 1 MCJ MCC . 
O 9 HOH A 1 183 2 HOH HOH . 
O 9 HOH A 2 184 5 HOH HOH . 
O 9 HOH A 3 185 7 HOH HOH . 
O 9 HOH A 4 186 9 HOH HOH . 
O 9 HOH A 5 187 10 HOH HOH . 
O 9 HOH A 6 188 12 HOH HOH . 
O 9 HOH A 7 189 15 HOH HOH . 
O 9 HOH A 8 190 19 HOH HOH . 
O 9 HOH A 9 191 23 HOH HOH . 
O 9 HOH A 10 192 35 HOH HOH . 
O 9 HOH A 11 193 37 HOH HOH . 
O 9 HOH A 12 194 39 HOH HOH . 
O 9 HOH A 13 195 50 HOH HOH . 
O 9 HOH A 14 196 55 HOH HOH . 
O 9 HOH A 15 197 56 HOH HOH . 
O 9 HOH A 16 198 58 HOH HOH . 
O 9 HOH A 17 199 62 HOH HOH . 
O 9 HOH A 18 200 64 HOH HOH . 
O 9 HOH A 19 201 65 HOH HOH . 
O 9 HOH A 20 202 67 HOH HOH . 
O 9 HOH A 21 203 71 HOH HOH . 
O 9 HOH A 22 204 72 HOH HOH . 
O 9 HOH A 23 205 78 HOH HOH . 
O 9 HOH A 24 206 79 HOH HOH . 
O 9 HOH A 25 207 101 HOH HOH . 
O 9 HOH A 26 208 107 HOH HOH . 
O 9 HOH A 27 209 115 HOH HOH . 
O 9 HOH A 28 210 120 HOH HOH . 
O 9 HOH A 29 211 121 HOH HOH . 
O 9 HOH A 30 212 124 HOH HOH . 
O 9 HOH A 31 213 128 HOH HOH . 
O 9 HOH A 32 214 131 HOH HOH . 
O 9 HOH A 33 215 134 HOH HOH . 
O 9 HOH A 34 216 135 HOH HOH . 
O 9 HOH A 35 217 143 HOH HOH . 
O 9 HOH A 36 218 146 HOH HOH . 
O 9 HOH A 37 219 147 HOH HOH . 
O 9 HOH A 38 220 148 HOH HOH . 
P 9 HOH B 1 181 82 HOH HOH . 
P 9 HOH B 2 182 93 HOH HOH . 
P 9 HOH B 3 183 112 HOH HOH . 
P 9 HOH B 4 184 136 HOH HOH . 
P 9 HOH B 5 185 144 HOH HOH . 
Q 9 HOH C 1 184 3 HOH HOH . 
Q 9 HOH C 2 185 4 HOH HOH . 
Q 9 HOH C 3 186 8 HOH HOH . 
Q 9 HOH C 4 187 11 HOH HOH . 
Q 9 HOH C 5 188 13 HOH HOH . 
Q 9 HOH C 6 189 14 HOH HOH . 
Q 9 HOH C 7 190 16 HOH HOH . 
Q 9 HOH C 8 191 17 HOH HOH . 
Q 9 HOH C 9 192 21 HOH HOH . 
Q 9 HOH C 10 193 22 HOH HOH . 
Q 9 HOH C 11 194 24 HOH HOH . 
Q 9 HOH C 12 195 25 HOH HOH . 
Q 9 HOH C 13 196 27 HOH HOH . 
Q 9 HOH C 14 197 28 HOH HOH . 
Q 9 HOH C 15 198 30 HOH HOH . 
Q 9 HOH C 16 199 31 HOH HOH . 
Q 9 HOH C 17 200 33 HOH HOH . 
Q 9 HOH C 18 201 34 HOH HOH . 
Q 9 HOH C 19 202 36 HOH HOH . 
Q 9 HOH C 20 203 38 HOH HOH . 
Q 9 HOH C 21 204 41 HOH HOH . 
Q 9 HOH C 22 205 42 HOH HOH . 
Q 9 HOH C 23 206 43 HOH HOH . 
Q 9 HOH C 24 207 44 HOH HOH . 
Q 9 HOH C 25 208 45 HOH HOH . 
Q 9 HOH C 26 209 46 HOH HOH . 
Q 9 HOH C 27 210 47 HOH HOH . 
Q 9 HOH C 28 211 48 HOH HOH . 
Q 9 HOH C 29 212 49 HOH HOH . 
Q 9 HOH C 30 213 51 HOH HOH . 
Q 9 HOH C 31 214 52 HOH HOH . 
Q 9 HOH C 32 215 54 HOH HOH . 
Q 9 HOH C 33 216 60 HOH HOH . 
Q 9 HOH C 34 217 61 HOH HOH . 
Q 9 HOH C 35 218 68 HOH HOH . 
Q 9 HOH C 36 219 69 HOH HOH . 
Q 9 HOH C 37 220 70 HOH HOH . 
Q 9 HOH C 38 221 80 HOH HOH . 
Q 9 HOH C 39 222 85 HOH HOH . 
Q 9 HOH C 40 223 91 HOH HOH . 
Q 9 HOH C 41 224 99 HOH HOH . 
Q 9 HOH C 42 225 104 HOH HOH . 
Q 9 HOH C 43 226 105 HOH HOH . 
Q 9 HOH C 44 227 106 HOH HOH . 
Q 9 HOH C 45 228 108 HOH HOH . 
Q 9 HOH C 46 229 111 HOH HOH . 
Q 9 HOH C 47 230 116 HOH HOH . 
Q 9 HOH C 48 231 127 HOH HOH . 
Q 9 HOH C 49 232 129 HOH HOH . 
Q 9 HOH C 50 233 137 HOH HOH . 
Q 9 HOH C 51 234 138 HOH HOH . 
Q 9 HOH C 52 235 139 HOH HOH . 
Q 9 HOH C 53 236 140 HOH HOH . 
Q 9 HOH C 54 237 141 HOH HOH . 
Q 9 HOH C 55 238 142 HOH HOH . 
Q 9 HOH C 56 239 145 HOH HOH . 
Q 9 HOH C 57 240 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . M 7 26.815 40.723 51.511 1 63.25 ? C1 GOL 182 C 1 
HETATM 2 O O1 GOL . . . M 7 26.829 42.122 51.679 1 63.18 ? O1 GOL 182 C 1 
HETATM 3 C C2 GOL . . . M 7 28.072 40.133 52.137 1 63.02 ? C2 GOL 182 C 1 
HETATM 4 O O2 GOL . . . M 7 28.317 38.856 51.595 1 63.38 ? O2 GOL 182 C 1 
HETATM 5 C C3 GOL . . . M 7 27.921 40.033 53.656 1 62.93 ? C3 GOL 182 C 1 
HETATM 6 O O3 GOL . . . M 7 29.038 40.554 54.348 1 62.49 ? O3 GOL 182 C 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#