data_3I13 # _model_server_result.job_id jLl8uyW-VHUdp2byEXcOsQ _model_server_result.datetime_utc '2025-01-03 04:29:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i13 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":228}' # _entry.id 3I13 # _exptl.entry_id 3I13 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.06 _cell.angle_gamma 90 _cell.entry_id 3I13 _cell.length_a 53.111 _cell.length_b 61.41 _cell.length_c 69.483 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I13 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 B ZN ZN . A ZN 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc2 A ND1 HIS 88 A HIS 88 1_555 B ZN ZN . A ZN 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc3 A OD2 ASP 90 A ASP 90 1_555 C ZN ZN . A ZN 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc4 A NE2 HIS 149 A HIS 149 1_555 B ZN ZN . A ZN 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc5 A SG CYS 168 A CYS 168 1_555 C ZN ZN . A ZN 229 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 A NE2 HIS 210 A HIS 210 1_555 C ZN ZN . A ZN 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc7 B ZN ZN . A ZN 228 1_555 D O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc8 C ZN ZN . A ZN 229 1_555 D O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc9 C ZN ZN . A ZN 229 1_555 D O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3I13 _atom_sites.fract_transf_matrix[1][1] 0.018828 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 228 1 ZN ZN . C 2 ZN A 1 229 2 ZN ZN . D 3 HOH A 1 230 230 HOH HOH . D 3 HOH A 2 231 231 HOH HOH . D 3 HOH A 3 232 232 HOH HOH . D 3 HOH A 4 233 233 HOH HOH . D 3 HOH A 5 234 234 HOH HOH . D 3 HOH A 6 235 235 HOH HOH . D 3 HOH A 7 236 236 HOH HOH . D 3 HOH A 8 237 237 HOH HOH . D 3 HOH A 9 238 238 HOH HOH . D 3 HOH A 10 239 239 HOH HOH . D 3 HOH A 11 240 240 HOH HOH . D 3 HOH A 12 241 241 HOH HOH . D 3 HOH A 13 242 242 HOH HOH . D 3 HOH A 14 243 243 HOH HOH . D 3 HOH A 15 244 244 HOH HOH . D 3 HOH A 16 245 245 HOH HOH . D 3 HOH A 17 246 246 HOH HOH . D 3 HOH A 18 247 1 HOH HOH . D 3 HOH A 19 248 2 HOH HOH . D 3 HOH A 20 249 3 HOH HOH . D 3 HOH A 21 250 4 HOH HOH . D 3 HOH A 22 251 5 HOH HOH . D 3 HOH A 23 252 6 HOH HOH . D 3 HOH A 24 253 7 HOH HOH . D 3 HOH A 25 254 8 HOH HOH . D 3 HOH A 26 255 9 HOH HOH . D 3 HOH A 27 256 10 HOH HOH . D 3 HOH A 28 257 11 HOH HOH . D 3 HOH A 29 258 12 HOH HOH . D 3 HOH A 30 259 13 HOH HOH . D 3 HOH A 31 260 14 HOH HOH . D 3 HOH A 32 261 16 HOH HOH . D 3 HOH A 33 262 17 HOH HOH . D 3 HOH A 34 263 18 HOH HOH . D 3 HOH A 35 264 19 HOH HOH . D 3 HOH A 36 265 20 HOH HOH . D 3 HOH A 37 266 21 HOH HOH . D 3 HOH A 38 267 22 HOH HOH . D 3 HOH A 39 268 23 HOH HOH . D 3 HOH A 40 269 24 HOH HOH . D 3 HOH A 41 270 25 HOH HOH . D 3 HOH A 42 271 26 HOH HOH . D 3 HOH A 43 272 27 HOH HOH . D 3 HOH A 44 273 28 HOH HOH . D 3 HOH A 45 274 29 HOH HOH . D 3 HOH A 46 275 30 HOH HOH . D 3 HOH A 47 276 31 HOH HOH . D 3 HOH A 48 277 32 HOH HOH . D 3 HOH A 49 278 33 HOH HOH . D 3 HOH A 50 279 34 HOH HOH . D 3 HOH A 51 280 35 HOH HOH . D 3 HOH A 52 281 36 HOH HOH . D 3 HOH A 53 282 37 HOH HOH . D 3 HOH A 54 283 38 HOH HOH . D 3 HOH A 55 284 39 HOH HOH . D 3 HOH A 56 285 40 HOH HOH . D 3 HOH A 57 286 41 HOH HOH . D 3 HOH A 58 287 42 HOH HOH . D 3 HOH A 59 288 43 HOH HOH . D 3 HOH A 60 289 44 HOH HOH . D 3 HOH A 61 290 45 HOH HOH . D 3 HOH A 62 291 46 HOH HOH . D 3 HOH A 63 292 47 HOH HOH . D 3 HOH A 64 293 48 HOH HOH . D 3 HOH A 65 294 49 HOH HOH . D 3 HOH A 66 295 50 HOH HOH . D 3 HOH A 67 296 51 HOH HOH . D 3 HOH A 68 297 52 HOH HOH . D 3 HOH A 69 298 53 HOH HOH . D 3 HOH A 70 299 54 HOH HOH . D 3 HOH A 71 300 55 HOH HOH . D 3 HOH A 72 301 56 HOH HOH . D 3 HOH A 73 302 57 HOH HOH . D 3 HOH A 74 303 58 HOH HOH . D 3 HOH A 75 304 59 HOH HOH . D 3 HOH A 76 305 60 HOH HOH . D 3 HOH A 77 306 62 HOH HOH . D 3 HOH A 78 307 63 HOH HOH . D 3 HOH A 79 308 64 HOH HOH . D 3 HOH A 80 309 65 HOH HOH . D 3 HOH A 81 310 66 HOH HOH . D 3 HOH A 82 311 67 HOH HOH . D 3 HOH A 83 312 68 HOH HOH . D 3 HOH A 84 313 69 HOH HOH . D 3 HOH A 85 314 70 HOH HOH . D 3 HOH A 86 315 71 HOH HOH . D 3 HOH A 87 316 72 HOH HOH . D 3 HOH A 88 317 73 HOH HOH . D 3 HOH A 89 318 74 HOH HOH . D 3 HOH A 90 319 75 HOH HOH . D 3 HOH A 91 320 76 HOH HOH . D 3 HOH A 92 321 77 HOH HOH . D 3 HOH A 93 322 78 HOH HOH . D 3 HOH A 94 323 79 HOH HOH . D 3 HOH A 95 324 80 HOH HOH . D 3 HOH A 96 325 81 HOH HOH . D 3 HOH A 97 326 82 HOH HOH . D 3 HOH A 98 327 83 HOH HOH . D 3 HOH A 99 328 84 HOH HOH . D 3 HOH A 100 329 85 HOH HOH . D 3 HOH A 101 330 86 HOH HOH . D 3 HOH A 102 331 87 HOH HOH . D 3 HOH A 103 332 88 HOH HOH . D 3 HOH A 104 333 89 HOH HOH . D 3 HOH A 105 334 90 HOH HOH . D 3 HOH A 106 335 92 HOH HOH . D 3 HOH A 107 336 93 HOH HOH . D 3 HOH A 108 337 94 HOH HOH . D 3 HOH A 109 338 95 HOH HOH . D 3 HOH A 110 339 96 HOH HOH . D 3 HOH A 111 340 97 HOH HOH . D 3 HOH A 112 341 98 HOH HOH . D 3 HOH A 113 342 99 HOH HOH . D 3 HOH A 114 343 100 HOH HOH . D 3 HOH A 115 344 101 HOH HOH . D 3 HOH A 116 345 102 HOH HOH . D 3 HOH A 117 346 104 HOH HOH . D 3 HOH A 118 347 105 HOH HOH . D 3 HOH A 119 348 106 HOH HOH . D 3 HOH A 120 349 107 HOH HOH . D 3 HOH A 121 350 108 HOH HOH . D 3 HOH A 122 351 109 HOH HOH . D 3 HOH A 123 352 110 HOH HOH . D 3 HOH A 124 353 111 HOH HOH . D 3 HOH A 125 354 112 HOH HOH . D 3 HOH A 126 355 114 HOH HOH . D 3 HOH A 127 356 115 HOH HOH . D 3 HOH A 128 357 116 HOH HOH . D 3 HOH A 129 358 117 HOH HOH . D 3 HOH A 130 359 118 HOH HOH . D 3 HOH A 131 360 119 HOH HOH . D 3 HOH A 132 361 121 HOH HOH . D 3 HOH A 133 362 122 HOH HOH . D 3 HOH A 134 363 124 HOH HOH . D 3 HOH A 135 364 125 HOH HOH . D 3 HOH A 136 365 127 HOH HOH . D 3 HOH A 137 366 128 HOH HOH . D 3 HOH A 138 367 129 HOH HOH . D 3 HOH A 139 368 130 HOH HOH . D 3 HOH A 140 369 131 HOH HOH . D 3 HOH A 141 370 132 HOH HOH . D 3 HOH A 142 371 133 HOH HOH . D 3 HOH A 143 372 134 HOH HOH . D 3 HOH A 144 373 136 HOH HOH . D 3 HOH A 145 374 137 HOH HOH . D 3 HOH A 146 375 139 HOH HOH . D 3 HOH A 147 376 141 HOH HOH . D 3 HOH A 148 377 142 HOH HOH . D 3 HOH A 149 378 143 HOH HOH . D 3 HOH A 150 379 144 HOH HOH . D 3 HOH A 151 380 145 HOH HOH . D 3 HOH A 152 381 146 HOH HOH . D 3 HOH A 153 382 147 HOH HOH . D 3 HOH A 154 383 148 HOH HOH . D 3 HOH A 155 384 149 HOH HOH . D 3 HOH A 156 385 150 HOH HOH . D 3 HOH A 157 386 151 HOH HOH . D 3 HOH A 158 387 152 HOH HOH . D 3 HOH A 159 388 153 HOH HOH . D 3 HOH A 160 389 154 HOH HOH . D 3 HOH A 161 390 155 HOH HOH . D 3 HOH A 162 391 156 HOH HOH . D 3 HOH A 163 392 157 HOH HOH . D 3 HOH A 164 393 158 HOH HOH . D 3 HOH A 165 394 159 HOH HOH . D 3 HOH A 166 395 160 HOH HOH . D 3 HOH A 167 396 161 HOH HOH . D 3 HOH A 168 397 164 HOH HOH . D 3 HOH A 169 398 165 HOH HOH . D 3 HOH A 170 399 166 HOH HOH . D 3 HOH A 171 400 167 HOH HOH . D 3 HOH A 172 401 168 HOH HOH . D 3 HOH A 173 402 169 HOH HOH . D 3 HOH A 174 403 170 HOH HOH . D 3 HOH A 175 404 171 HOH HOH . D 3 HOH A 176 405 172 HOH HOH . D 3 HOH A 177 406 173 HOH HOH . D 3 HOH A 178 407 174 HOH HOH . D 3 HOH A 179 408 177 HOH HOH . D 3 HOH A 180 409 178 HOH HOH . D 3 HOH A 181 410 181 HOH HOH . D 3 HOH A 182 411 182 HOH HOH . D 3 HOH A 183 412 183 HOH HOH . D 3 HOH A 184 413 184 HOH HOH . D 3 HOH A 185 414 187 HOH HOH . D 3 HOH A 186 415 189 HOH HOH . D 3 HOH A 187 416 190 HOH HOH . D 3 HOH A 188 417 191 HOH HOH . D 3 HOH A 189 418 192 HOH HOH . D 3 HOH A 190 419 194 HOH HOH . D 3 HOH A 191 420 195 HOH HOH . D 3 HOH A 192 421 197 HOH HOH . D 3 HOH A 193 422 198 HOH HOH . D 3 HOH A 194 423 199 HOH HOH . D 3 HOH A 195 424 200 HOH HOH . D 3 HOH A 196 425 201 HOH HOH . D 3 HOH A 197 426 202 HOH HOH . D 3 HOH A 198 427 203 HOH HOH . D 3 HOH A 199 428 204 HOH HOH . D 3 HOH A 200 429 205 HOH HOH . D 3 HOH A 201 430 206 HOH HOH . D 3 HOH A 202 431 207 HOH HOH . D 3 HOH A 203 432 208 HOH HOH . D 3 HOH A 204 433 209 HOH HOH . D 3 HOH A 205 434 210 HOH HOH . D 3 HOH A 206 435 211 HOH HOH . D 3 HOH A 207 436 212 HOH HOH . D 3 HOH A 208 437 213 HOH HOH . D 3 HOH A 209 438 214 HOH HOH . D 3 HOH A 210 439 215 HOH HOH . D 3 HOH A 211 440 216 HOH HOH . D 3 HOH A 212 441 217 HOH HOH . D 3 HOH A 213 442 218 HOH HOH . D 3 HOH A 214 443 219 HOH HOH . D 3 HOH A 215 444 220 HOH HOH . D 3 HOH A 216 445 222 HOH HOH . D 3 HOH A 217 446 223 HOH HOH . D 3 HOH A 218 447 225 HOH HOH . D 3 HOH A 219 448 228 HOH HOH . D 3 HOH A 220 449 229 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 6.788 _atom_site.Cartn_y 6.345 _atom_site.Cartn_z 26.041 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 228 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #