data_3I3J # _model_server_result.job_id sVTIwbHVPUorPxm0aZ2jww _model_server_result.datetime_utc '2024-11-25 17:16:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1}' # _entry.id 3I3J # _exptl.entry_id 3I3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.98 _cell.angle_gamma 90 _cell.entry_id 3I3J _cell.length_a 64.899 _cell.length_b 86.186 _cell.length_c 149.897 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 ? monomeric 1 author_defined_assembly 9 ? monomeric 1 author_defined_assembly 10 ? monomeric 1 author_defined_assembly 11 ? monomeric 1 author_defined_assembly 12 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,M,N,S 1 1 B,T 2 1 C,U 3 1 D,V 4 1 E,O,P,Q,W 5 1 F,X 6 1 G,Y 7 1 H,Z 8 1 I,AA 9 1 J,BA 10 1 K,CA 11 1 L,R,DA 12 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 N N N ? 3 Q N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 216 n n C1 C2 PEG sing 217 n n C1 H11 PEG sing 218 n n C1 H12 PEG sing 219 n n O1 HO1 PEG sing 220 n n C2 O2 PEG sing 221 n n C2 H21 PEG sing 222 n n C2 H22 PEG sing 223 n n O2 C3 PEG sing 224 n n C3 C4 PEG sing 225 n n C3 H31 PEG sing 226 n n C3 H32 PEG sing 227 n n C4 O4 PEG sing 228 n n C4 H41 PEG sing 229 n n C4 H42 PEG sing 230 n n O4 HO4 PEG sing 231 n n # _atom_sites.entry_id 3I3J _atom_sites.fract_transf_matrix[1][1] 0.015409 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001886 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011603 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 CL A 1 3 3 CL CL . N 3 PEG A 1 1 1 PEG PEG . O 4 SO4 E 1 1 1 SO4 SO4 . P 2 CL E 1 2 2 CL CL . Q 3 PEG E 1 1162 2 PEG PEG . R 4 SO4 L 1 2 2 SO4 SO4 . S 5 HOH A 1 6 6 HOH HOH . S 5 HOH A 2 9 9 HOH HOH . S 5 HOH A 3 20 20 HOH HOH . S 5 HOH A 4 22 22 HOH HOH . S 5 HOH A 5 26 26 HOH HOH . S 5 HOH A 6 34 34 HOH HOH . S 5 HOH A 7 47 47 HOH HOH . S 5 HOH A 8 52 52 HOH HOH . S 5 HOH A 9 89 89 HOH HOH . S 5 HOH A 10 105 105 HOH HOH . S 5 HOH A 11 120 120 HOH HOH . S 5 HOH A 12 122 122 HOH HOH . S 5 HOH A 13 123 123 HOH HOH . S 5 HOH A 14 126 126 HOH HOH . S 5 HOH A 15 130 130 HOH HOH . S 5 HOH A 16 132 132 HOH HOH . S 5 HOH A 17 145 145 HOH HOH . S 5 HOH A 18 152 152 HOH HOH . S 5 HOH A 19 159 159 HOH HOH . S 5 HOH A 20 210 210 HOH HOH . S 5 HOH A 21 221 221 HOH HOH . S 5 HOH A 22 233 233 HOH HOH . S 5 HOH A 23 241 241 HOH HOH . S 5 HOH A 24 242 242 HOH HOH . S 5 HOH A 25 248 248 HOH HOH . S 5 HOH A 26 250 250 HOH HOH . S 5 HOH A 27 290 290 HOH HOH . S 5 HOH A 28 297 297 HOH HOH . S 5 HOH A 29 302 302 HOH HOH . S 5 HOH A 30 307 307 HOH HOH . S 5 HOH A 31 313 313 HOH HOH . S 5 HOH A 32 321 321 HOH HOH . S 5 HOH A 33 323 323 HOH HOH . S 5 HOH A 34 334 334 HOH HOH . S 5 HOH A 35 335 335 HOH HOH . S 5 HOH A 36 397 397 HOH HOH . S 5 HOH A 37 427 427 HOH HOH . S 5 HOH A 38 1162 1 HOH HOH . S 5 HOH A 39 1163 3 HOH HOH . T 5 HOH B 1 60 60 HOH HOH . T 5 HOH B 2 65 65 HOH HOH . T 5 HOH B 3 67 67 HOH HOH . T 5 HOH B 4 81 81 HOH HOH . T 5 HOH B 5 99 99 HOH HOH . T 5 HOH B 6 149 149 HOH HOH . T 5 HOH B 7 205 205 HOH HOH . T 5 HOH B 8 212 212 HOH HOH . T 5 HOH B 9 246 246 HOH HOH . T 5 HOH B 10 296 296 HOH HOH . T 5 HOH B 11 351 351 HOH HOH . T 5 HOH B 12 373 373 HOH HOH . T 5 HOH B 13 428 428 HOH HOH . T 5 HOH B 14 429 429 HOH HOH . U 5 HOH C 1 12 12 HOH HOH . U 5 HOH C 2 17 17 HOH HOH . U 5 HOH C 3 19 19 HOH HOH . U 5 HOH C 4 48 48 HOH HOH . U 5 HOH C 5 51 51 HOH HOH . U 5 HOH C 6 61 61 HOH HOH . U 5 HOH C 7 72 72 HOH HOH . U 5 HOH C 8 73 73 HOH HOH . U 5 HOH C 9 82 82 HOH HOH . U 5 HOH C 10 83 83 HOH HOH . U 5 HOH C 11 84 84 HOH HOH . U 5 HOH C 12 100 100 HOH HOH . U 5 HOH C 13 108 108 HOH HOH . U 5 HOH C 14 118 118 HOH HOH . U 5 HOH C 15 119 119 HOH HOH . U 5 HOH C 16 141 141 HOH HOH . U 5 HOH C 17 144 144 HOH HOH . U 5 HOH C 18 148 148 HOH HOH . U 5 HOH C 19 181 181 HOH HOH . U 5 HOH C 20 206 206 HOH HOH . U 5 HOH C 21 229 229 HOH HOH . U 5 HOH C 22 230 230 HOH HOH . U 5 HOH C 23 257 257 HOH HOH . U 5 HOH C 24 269 269 HOH HOH . U 5 HOH C 25 304 304 HOH HOH . U 5 HOH C 26 324 324 HOH HOH . U 5 HOH C 27 350 350 HOH HOH . U 5 HOH C 28 353 353 HOH HOH . U 5 HOH C 29 356 356 HOH HOH . U 5 HOH C 30 403 403 HOH HOH . U 5 HOH C 31 430 430 HOH HOH . V 5 HOH D 1 31 31 HOH HOH . V 5 HOH D 2 59 59 HOH HOH . V 5 HOH D 3 66 66 HOH HOH . V 5 HOH D 4 90 90 HOH HOH . V 5 HOH D 5 92 92 HOH HOH . V 5 HOH D 6 95 95 HOH HOH . V 5 HOH D 7 110 110 HOH HOH . V 5 HOH D 8 111 111 HOH HOH . V 5 HOH D 9 116 116 HOH HOH . V 5 HOH D 10 164 164 HOH HOH . V 5 HOH D 11 202 202 HOH HOH . V 5 HOH D 12 209 209 HOH HOH . V 5 HOH D 13 218 218 HOH HOH . V 5 HOH D 14 279 279 HOH HOH . V 5 HOH D 15 293 293 HOH HOH . V 5 HOH D 16 318 318 HOH HOH . V 5 HOH D 17 322 322 HOH HOH . V 5 HOH D 18 354 354 HOH HOH . V 5 HOH D 19 380 380 HOH HOH . V 5 HOH D 20 426 426 HOH HOH . W 5 HOH E 1 10 10 HOH HOH . W 5 HOH E 2 11 11 HOH HOH . W 5 HOH E 3 14 14 HOH HOH . W 5 HOH E 4 15 15 HOH HOH . W 5 HOH E 5 43 43 HOH HOH . W 5 HOH E 6 50 50 HOH HOH . W 5 HOH E 7 104 104 HOH HOH . W 5 HOH E 8 107 107 HOH HOH . W 5 HOH E 9 109 109 HOH HOH . W 5 HOH E 10 124 124 HOH HOH . W 5 HOH E 11 134 134 HOH HOH . W 5 HOH E 12 151 151 HOH HOH . W 5 HOH E 13 153 153 HOH HOH . W 5 HOH E 14 162 162 HOH HOH . W 5 HOH E 15 179 179 HOH HOH . W 5 HOH E 16 191 191 HOH HOH . W 5 HOH E 17 214 214 HOH HOH . W 5 HOH E 18 219 219 HOH HOH . W 5 HOH E 19 224 224 HOH HOH . W 5 HOH E 20 232 232 HOH HOH . W 5 HOH E 21 238 238 HOH HOH . W 5 HOH E 22 251 251 HOH HOH . W 5 HOH E 23 264 264 HOH HOH . W 5 HOH E 24 272 272 HOH HOH . W 5 HOH E 25 283 283 HOH HOH . W 5 HOH E 26 284 284 HOH HOH . W 5 HOH E 27 344 344 HOH HOH . W 5 HOH E 28 359 359 HOH HOH . W 5 HOH E 29 367 367 HOH HOH . W 5 HOH E 30 370 370 HOH HOH . W 5 HOH E 31 392 392 HOH HOH . W 5 HOH E 32 410 410 HOH HOH . X 5 HOH F 1 327 327 HOH HOH . Y 5 HOH G 1 2 2 HOH HOH . Y 5 HOH G 2 5 5 HOH HOH . Y 5 HOH G 3 13 13 HOH HOH . Y 5 HOH G 4 24 24 HOH HOH . Y 5 HOH G 5 29 29 HOH HOH . Y 5 HOH G 6 39 39 HOH HOH . Y 5 HOH G 7 41 41 HOH HOH . Y 5 HOH G 8 49 49 HOH HOH . Y 5 HOH G 9 58 58 HOH HOH . Y 5 HOH G 10 62 62 HOH HOH . Y 5 HOH G 11 70 70 HOH HOH . Y 5 HOH G 12 75 75 HOH HOH . Y 5 HOH G 13 78 78 HOH HOH . Y 5 HOH G 14 93 93 HOH HOH . Y 5 HOH G 15 106 106 HOH HOH . Y 5 HOH G 16 128 128 HOH HOH . Y 5 HOH G 17 133 133 HOH HOH . Y 5 HOH G 18 136 136 HOH HOH . Y 5 HOH G 19 139 139 HOH HOH . Y 5 HOH G 20 140 140 HOH HOH . Y 5 HOH G 21 186 186 HOH HOH . Y 5 HOH G 22 190 190 HOH HOH . Y 5 HOH G 23 193 193 HOH HOH . Y 5 HOH G 24 203 203 HOH HOH . Y 5 HOH G 25 204 204 HOH HOH . Y 5 HOH G 26 216 216 HOH HOH . Y 5 HOH G 27 217 217 HOH HOH . Y 5 HOH G 28 227 227 HOH HOH . Y 5 HOH G 29 262 262 HOH HOH . Y 5 HOH G 30 265 265 HOH HOH . Y 5 HOH G 31 267 267 HOH HOH . Y 5 HOH G 32 291 291 HOH HOH . Y 5 HOH G 33 300 300 HOH HOH . Y 5 HOH G 34 317 317 HOH HOH . Y 5 HOH G 35 329 329 HOH HOH . Y 5 HOH G 36 333 333 HOH HOH . Y 5 HOH G 37 352 352 HOH HOH . Y 5 HOH G 38 378 378 HOH HOH . Z 5 HOH H 1 27 27 HOH HOH . Z 5 HOH H 2 44 44 HOH HOH . Z 5 HOH H 3 101 101 HOH HOH . Z 5 HOH H 4 208 208 HOH HOH . Z 5 HOH H 5 211 211 HOH HOH . Z 5 HOH H 6 234 234 HOH HOH . Z 5 HOH H 7 245 245 HOH HOH . Z 5 HOH H 8 255 255 HOH HOH . Z 5 HOH H 9 306 306 HOH HOH . Z 5 HOH H 10 309 309 HOH HOH . Z 5 HOH H 11 320 320 HOH HOH . Z 5 HOH H 12 345 345 HOH HOH . Z 5 HOH H 13 346 346 HOH HOH . Z 5 HOH H 14 402 402 HOH HOH . Z 5 HOH H 15 425 425 HOH HOH . AA 5 HOH I 1 35 35 HOH HOH . AA 5 HOH I 2 38 38 HOH HOH . AA 5 HOH I 3 46 46 HOH HOH . AA 5 HOH I 4 54 54 HOH HOH . AA 5 HOH I 5 77 77 HOH HOH . AA 5 HOH I 6 87 87 HOH HOH . AA 5 HOH I 7 102 102 HOH HOH . AA 5 HOH I 8 115 115 HOH HOH . AA 5 HOH I 9 143 143 HOH HOH . AA 5 HOH I 10 156 156 HOH HOH . AA 5 HOH I 11 160 160 HOH HOH . AA 5 HOH I 12 174 174 HOH HOH . AA 5 HOH I 13 180 180 HOH HOH . AA 5 HOH I 14 188 188 HOH HOH . AA 5 HOH I 15 192 192 HOH HOH . AA 5 HOH I 16 194 194 HOH HOH . AA 5 HOH I 17 215 215 HOH HOH . AA 5 HOH I 18 225 225 HOH HOH . AA 5 HOH I 19 281 281 HOH HOH . AA 5 HOH I 20 319 319 HOH HOH . AA 5 HOH I 21 340 340 HOH HOH . AA 5 HOH I 22 377 377 HOH HOH . AA 5 HOH I 23 395 395 HOH HOH . AA 5 HOH I 24 411 411 HOH HOH . BA 5 HOH J 1 7 7 HOH HOH . BA 5 HOH J 2 30 30 HOH HOH . BA 5 HOH J 3 33 33 HOH HOH . BA 5 HOH J 4 45 45 HOH HOH . BA 5 HOH J 5 79 79 HOH HOH . BA 5 HOH J 6 80 80 HOH HOH . BA 5 HOH J 7 117 117 HOH HOH . BA 5 HOH J 8 137 137 HOH HOH . BA 5 HOH J 9 142 142 HOH HOH . BA 5 HOH J 10 170 170 HOH HOH . BA 5 HOH J 11 175 175 HOH HOH . BA 5 HOH J 12 195 195 HOH HOH . BA 5 HOH J 13 199 199 HOH HOH . BA 5 HOH J 14 237 237 HOH HOH . BA 5 HOH J 15 252 252 HOH HOH . BA 5 HOH J 16 260 260 HOH HOH . BA 5 HOH J 17 271 271 HOH HOH . BA 5 HOH J 18 295 295 HOH HOH . BA 5 HOH J 19 364 364 HOH HOH . BA 5 HOH J 20 375 375 HOH HOH . BA 5 HOH J 21 383 383 HOH HOH . BA 5 HOH J 22 384 384 HOH HOH . BA 5 HOH J 23 405 405 HOH HOH . CA 5 HOH K 1 4 4 HOH HOH . CA 5 HOH K 2 8 8 HOH HOH . CA 5 HOH K 3 23 23 HOH HOH . CA 5 HOH K 4 32 32 HOH HOH . CA 5 HOH K 5 36 36 HOH HOH . CA 5 HOH K 6 37 37 HOH HOH . CA 5 HOH K 7 40 40 HOH HOH . CA 5 HOH K 8 55 55 HOH HOH . CA 5 HOH K 9 64 64 HOH HOH . CA 5 HOH K 10 94 94 HOH HOH . CA 5 HOH K 11 125 125 HOH HOH . CA 5 HOH K 12 135 135 HOH HOH . CA 5 HOH K 13 146 146 HOH HOH . CA 5 HOH K 14 163 163 HOH HOH . CA 5 HOH K 15 196 196 HOH HOH . CA 5 HOH K 16 220 220 HOH HOH . CA 5 HOH K 17 222 222 HOH HOH . CA 5 HOH K 18 239 239 HOH HOH . CA 5 HOH K 19 276 276 HOH HOH . CA 5 HOH K 20 292 292 HOH HOH . CA 5 HOH K 21 299 299 HOH HOH . CA 5 HOH K 22 305 305 HOH HOH . CA 5 HOH K 23 312 312 HOH HOH . CA 5 HOH K 24 336 336 HOH HOH . CA 5 HOH K 25 369 369 HOH HOH . CA 5 HOH K 26 372 372 HOH HOH . CA 5 HOH K 27 374 374 HOH HOH . CA 5 HOH K 28 382 382 HOH HOH . DA 5 HOH L 1 71 71 HOH HOH . DA 5 HOH L 2 96 96 HOH HOH . DA 5 HOH L 3 171 171 HOH HOH . DA 5 HOH L 4 213 213 HOH HOH . DA 5 HOH L 5 226 226 HOH HOH . DA 5 HOH L 6 231 231 HOH HOH . DA 5 HOH L 7 244 244 HOH HOH . DA 5 HOH L 8 249 249 HOH HOH . DA 5 HOH L 9 253 253 HOH HOH . DA 5 HOH L 10 254 254 HOH HOH . DA 5 HOH L 11 256 256 HOH HOH . DA 5 HOH L 12 259 259 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . N 3 30.715 19.281 139.265 1 48.46 ? C1 PEG 1 A 1 HETATM 2 O O1 PEG . . . N 3 29.341 19.447 139.495 1 48.46 ? O1 PEG 1 A 1 HETATM 3 C C2 PEG . . . N 3 31.348 19.979 138.042 1 48.46 ? C2 PEG 1 A 1 HETATM 4 O O2 PEG . . . N 3 30.977 21.294 137.7 1 48.46 ? O2 PEG 1 A 1 HETATM 5 C C3 PEG . . . N 3 30.483 22.246 138.641 1 48.46 ? C3 PEG 1 A 1 HETATM 6 C C4 PEG . . . N 3 31.288 22.663 139.887 1 48.46 ? C4 PEG 1 A 1 HETATM 7 O O4 PEG . . . N 3 32.117 23.807 139.827 1 48.46 ? O4 PEG 1 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #