data_3I3Q # _model_server_result.job_id ryfCUtRcyv068GctRQOtdA _model_server_result.datetime_utc '2024-11-27 00:22:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 3I3Q # _exptl.entry_id 3I3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.18 _cell.angle_beta 74.8 _cell.angle_gamma 63.62 _cell.entry_id 3I3Q _cell.length_a 39.746 _cell.length_b 39.187 _cell.length_c 72.407 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3I3Q _atom_sites.fract_transf_matrix[1][1] 0.02516 _atom_sites.fract_transf_matrix[1][2] -0.012478 _atom_sites.fract_transf_matrix[1][3] -0.005354 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028485 _atom_sites.fract_transf_matrix[2][3] -0.003499 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014419 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AKG A 1 401 401 AKG AKG . D 3 MN A 1 301 301 MN MN . E 2 AKG B 1 402 402 AKG AKG . F 3 MN B 1 302 302 MN MN . G 4 HOH A 1 601 601 HOH HOH . G 4 HOH A 2 602 602 HOH HOH . G 4 HOH A 3 604 604 HOH HOH . G 4 HOH A 4 605 605 HOH HOH . G 4 HOH A 5 606 606 HOH HOH . G 4 HOH A 6 607 607 HOH HOH . G 4 HOH A 7 608 608 HOH HOH . G 4 HOH A 8 609 609 HOH HOH . G 4 HOH A 9 610 610 HOH HOH . G 4 HOH A 10 611 611 HOH HOH . G 4 HOH A 11 612 612 HOH HOH . G 4 HOH A 12 613 613 HOH HOH . G 4 HOH A 13 616 616 HOH HOH . G 4 HOH A 14 619 619 HOH HOH . G 4 HOH A 15 623 623 HOH HOH . G 4 HOH A 16 624 624 HOH HOH . G 4 HOH A 17 628 628 HOH HOH . G 4 HOH A 18 631 631 HOH HOH . G 4 HOH A 19 632 632 HOH HOH . G 4 HOH A 20 633 633 HOH HOH . G 4 HOH A 21 636 636 HOH HOH . G 4 HOH A 22 637 637 HOH HOH . G 4 HOH A 23 640 640 HOH HOH . G 4 HOH A 24 641 641 HOH HOH . G 4 HOH A 25 642 642 HOH HOH . G 4 HOH A 26 643 643 HOH HOH . G 4 HOH A 27 644 644 HOH HOH . G 4 HOH A 28 645 645 HOH HOH . G 4 HOH A 29 647 647 HOH HOH . G 4 HOH A 30 648 648 HOH HOH . G 4 HOH A 31 649 649 HOH HOH . G 4 HOH A 32 653 653 HOH HOH . G 4 HOH A 33 654 654 HOH HOH . G 4 HOH A 34 655 655 HOH HOH . G 4 HOH A 35 657 657 HOH HOH . G 4 HOH A 36 658 658 HOH HOH . G 4 HOH A 37 663 663 HOH HOH . G 4 HOH A 38 664 664 HOH HOH . G 4 HOH A 39 665 665 HOH HOH . G 4 HOH A 40 673 673 HOH HOH . G 4 HOH A 41 674 674 HOH HOH . G 4 HOH A 42 676 676 HOH HOH . G 4 HOH A 43 678 678 HOH HOH . G 4 HOH A 44 679 679 HOH HOH . G 4 HOH A 45 682 682 HOH HOH . G 4 HOH A 46 686 686 HOH HOH . G 4 HOH A 47 688 688 HOH HOH . G 4 HOH A 48 690 690 HOH HOH . G 4 HOH A 49 692 692 HOH HOH . G 4 HOH A 50 696 696 HOH HOH . G 4 HOH A 51 699 699 HOH HOH . G 4 HOH A 52 700 700 HOH HOH . G 4 HOH A 53 701 701 HOH HOH . G 4 HOH A 54 702 702 HOH HOH . G 4 HOH A 55 703 703 HOH HOH . G 4 HOH A 56 705 705 HOH HOH . G 4 HOH A 57 708 708 HOH HOH . G 4 HOH A 58 711 711 HOH HOH . G 4 HOH A 59 717 717 HOH HOH . G 4 HOH A 60 718 718 HOH HOH . G 4 HOH A 61 719 719 HOH HOH . G 4 HOH A 62 720 720 HOH HOH . G 4 HOH A 63 722 722 HOH HOH . G 4 HOH A 64 723 723 HOH HOH . G 4 HOH A 65 728 728 HOH HOH . G 4 HOH A 66 730 730 HOH HOH . G 4 HOH A 67 731 731 HOH HOH . G 4 HOH A 68 733 733 HOH HOH . G 4 HOH A 69 734 734 HOH HOH . G 4 HOH A 70 735 735 HOH HOH . G 4 HOH A 71 740 740 HOH HOH . G 4 HOH A 72 747 747 HOH HOH . G 4 HOH A 73 749 749 HOH HOH . G 4 HOH A 74 751 751 HOH HOH . G 4 HOH A 75 752 752 HOH HOH . G 4 HOH A 76 753 753 HOH HOH . G 4 HOH A 77 757 757 HOH HOH . G 4 HOH A 78 759 759 HOH HOH . G 4 HOH A 79 763 763 HOH HOH . G 4 HOH A 80 764 764 HOH HOH . G 4 HOH A 81 765 765 HOH HOH . G 4 HOH A 82 766 766 HOH HOH . G 4 HOH A 83 769 769 HOH HOH . G 4 HOH A 84 773 773 HOH HOH . G 4 HOH A 85 774 774 HOH HOH . G 4 HOH A 86 779 779 HOH HOH . G 4 HOH A 87 781 781 HOH HOH . G 4 HOH A 88 782 782 HOH HOH . G 4 HOH A 89 784 784 HOH HOH . G 4 HOH A 90 786 786 HOH HOH . G 4 HOH A 91 789 789 HOH HOH . G 4 HOH A 92 791 791 HOH HOH . G 4 HOH A 93 792 792 HOH HOH . G 4 HOH A 94 797 797 HOH HOH . G 4 HOH A 95 799 799 HOH HOH . G 4 HOH A 96 802 802 HOH HOH . G 4 HOH A 97 803 803 HOH HOH . G 4 HOH A 98 804 804 HOH HOH . G 4 HOH A 99 805 805 HOH HOH . G 4 HOH A 100 809 809 HOH HOH . G 4 HOH A 101 811 811 HOH HOH . G 4 HOH A 102 812 812 HOH HOH . G 4 HOH A 103 813 813 HOH HOH . G 4 HOH A 104 815 815 HOH HOH . G 4 HOH A 105 817 817 HOH HOH . G 4 HOH A 106 819 819 HOH HOH . G 4 HOH A 107 820 820 HOH HOH . G 4 HOH A 108 822 822 HOH HOH . G 4 HOH A 109 826 826 HOH HOH . G 4 HOH A 110 827 827 HOH HOH . G 4 HOH A 111 829 829 HOH HOH . G 4 HOH A 112 830 830 HOH HOH . G 4 HOH A 113 832 832 HOH HOH . G 4 HOH A 114 836 836 HOH HOH . G 4 HOH A 115 837 837 HOH HOH . G 4 HOH A 116 838 838 HOH HOH . G 4 HOH A 117 840 840 HOH HOH . G 4 HOH A 118 841 841 HOH HOH . G 4 HOH A 119 844 844 HOH HOH . G 4 HOH A 120 848 848 HOH HOH . G 4 HOH A 121 849 849 HOH HOH . G 4 HOH A 122 850 850 HOH HOH . G 4 HOH A 123 852 852 HOH HOH . G 4 HOH A 124 853 853 HOH HOH . G 4 HOH A 125 854 854 HOH HOH . G 4 HOH A 126 855 855 HOH HOH . G 4 HOH A 127 856 856 HOH HOH . G 4 HOH A 128 857 857 HOH HOH . G 4 HOH A 129 859 859 HOH HOH . G 4 HOH A 130 861 861 HOH HOH . G 4 HOH A 131 862 862 HOH HOH . G 4 HOH A 132 863 863 HOH HOH . G 4 HOH A 133 868 868 HOH HOH . G 4 HOH A 134 869 869 HOH HOH . G 4 HOH A 135 870 870 HOH HOH . G 4 HOH A 136 871 871 HOH HOH . G 4 HOH A 137 873 873 HOH HOH . G 4 HOH A 138 876 876 HOH HOH . G 4 HOH A 139 881 881 HOH HOH . G 4 HOH A 140 882 882 HOH HOH . G 4 HOH A 141 884 884 HOH HOH . G 4 HOH A 142 885 885 HOH HOH . G 4 HOH A 143 886 886 HOH HOH . G 4 HOH A 144 888 888 HOH HOH . G 4 HOH A 145 889 889 HOH HOH . G 4 HOH A 146 891 891 HOH HOH . G 4 HOH A 147 893 893 HOH HOH . G 4 HOH A 148 897 897 HOH HOH . G 4 HOH A 149 898 898 HOH HOH . G 4 HOH A 150 899 899 HOH HOH . G 4 HOH A 151 900 900 HOH HOH . G 4 HOH A 152 902 902 HOH HOH . G 4 HOH A 153 905 905 HOH HOH . G 4 HOH A 154 906 906 HOH HOH . G 4 HOH A 155 907 907 HOH HOH . G 4 HOH A 156 908 908 HOH HOH . G 4 HOH A 157 911 911 HOH HOH . G 4 HOH A 158 914 914 HOH HOH . G 4 HOH A 159 918 918 HOH HOH . G 4 HOH A 160 919 919 HOH HOH . G 4 HOH A 161 921 921 HOH HOH . G 4 HOH A 162 922 922 HOH HOH . G 4 HOH A 163 924 924 HOH HOH . G 4 HOH A 164 925 925 HOH HOH . G 4 HOH A 165 926 926 HOH HOH . G 4 HOH A 166 927 927 HOH HOH . G 4 HOH A 167 928 928 HOH HOH . G 4 HOH A 168 929 929 HOH HOH . G 4 HOH A 169 930 930 HOH HOH . G 4 HOH A 170 934 934 HOH HOH . G 4 HOH A 171 935 935 HOH HOH . G 4 HOH A 172 936 936 HOH HOH . G 4 HOH A 173 937 937 HOH HOH . G 4 HOH A 174 941 941 HOH HOH . G 4 HOH A 175 945 945 HOH HOH . H 4 HOH B 1 603 603 HOH HOH . H 4 HOH B 2 614 614 HOH HOH . H 4 HOH B 3 615 615 HOH HOH . H 4 HOH B 4 617 617 HOH HOH . H 4 HOH B 5 618 618 HOH HOH . H 4 HOH B 6 620 620 HOH HOH . H 4 HOH B 7 621 621 HOH HOH . H 4 HOH B 8 622 622 HOH HOH . H 4 HOH B 9 625 625 HOH HOH . H 4 HOH B 10 626 626 HOH HOH . H 4 HOH B 11 627 627 HOH HOH . H 4 HOH B 12 629 629 HOH HOH . H 4 HOH B 13 630 630 HOH HOH . H 4 HOH B 14 634 634 HOH HOH . H 4 HOH B 15 635 635 HOH HOH . H 4 HOH B 16 638 638 HOH HOH . H 4 HOH B 17 639 639 HOH HOH . H 4 HOH B 18 646 646 HOH HOH . H 4 HOH B 19 650 650 HOH HOH . H 4 HOH B 20 651 651 HOH HOH . H 4 HOH B 21 652 652 HOH HOH . H 4 HOH B 22 656 656 HOH HOH . H 4 HOH B 23 659 659 HOH HOH . H 4 HOH B 24 660 660 HOH HOH . H 4 HOH B 25 661 661 HOH HOH . H 4 HOH B 26 662 662 HOH HOH . H 4 HOH B 27 666 666 HOH HOH . H 4 HOH B 28 667 667 HOH HOH . H 4 HOH B 29 668 668 HOH HOH . H 4 HOH B 30 669 669 HOH HOH . H 4 HOH B 31 670 670 HOH HOH . H 4 HOH B 32 671 671 HOH HOH . H 4 HOH B 33 672 672 HOH HOH . H 4 HOH B 34 675 675 HOH HOH . H 4 HOH B 35 677 677 HOH HOH . H 4 HOH B 36 680 680 HOH HOH . H 4 HOH B 37 681 681 HOH HOH . H 4 HOH B 38 683 683 HOH HOH . H 4 HOH B 39 684 684 HOH HOH . H 4 HOH B 40 685 685 HOH HOH . H 4 HOH B 41 689 689 HOH HOH . H 4 HOH B 42 691 691 HOH HOH . H 4 HOH B 43 693 693 HOH HOH . H 4 HOH B 44 694 694 HOH HOH . H 4 HOH B 45 695 695 HOH HOH . H 4 HOH B 46 697 697 HOH HOH . H 4 HOH B 47 698 698 HOH HOH . H 4 HOH B 48 704 704 HOH HOH . H 4 HOH B 49 706 706 HOH HOH . H 4 HOH B 50 707 707 HOH HOH . H 4 HOH B 51 709 709 HOH HOH . H 4 HOH B 52 710 710 HOH HOH . H 4 HOH B 53 712 712 HOH HOH . H 4 HOH B 54 713 713 HOH HOH . H 4 HOH B 55 714 714 HOH HOH . H 4 HOH B 56 715 715 HOH HOH . H 4 HOH B 57 716 716 HOH HOH . H 4 HOH B 58 721 721 HOH HOH . H 4 HOH B 59 724 724 HOH HOH . H 4 HOH B 60 725 725 HOH HOH . H 4 HOH B 61 726 726 HOH HOH . H 4 HOH B 62 727 727 HOH HOH . H 4 HOH B 63 729 729 HOH HOH . H 4 HOH B 64 732 732 HOH HOH . H 4 HOH B 65 736 736 HOH HOH . H 4 HOH B 66 738 738 HOH HOH . H 4 HOH B 67 739 739 HOH HOH . H 4 HOH B 68 741 741 HOH HOH . H 4 HOH B 69 742 742 HOH HOH . H 4 HOH B 70 743 743 HOH HOH . H 4 HOH B 71 744 744 HOH HOH . H 4 HOH B 72 745 745 HOH HOH . H 4 HOH B 73 746 746 HOH HOH . H 4 HOH B 74 748 748 HOH HOH . H 4 HOH B 75 750 750 HOH HOH . H 4 HOH B 76 754 754 HOH HOH . H 4 HOH B 77 755 755 HOH HOH . H 4 HOH B 78 756 756 HOH HOH . H 4 HOH B 79 758 758 HOH HOH . H 4 HOH B 80 760 760 HOH HOH . H 4 HOH B 81 761 761 HOH HOH . H 4 HOH B 82 762 762 HOH HOH . H 4 HOH B 83 767 767 HOH HOH . H 4 HOH B 84 768 768 HOH HOH . H 4 HOH B 85 770 770 HOH HOH . H 4 HOH B 86 771 771 HOH HOH . H 4 HOH B 87 772 772 HOH HOH . H 4 HOH B 88 775 775 HOH HOH . H 4 HOH B 89 776 776 HOH HOH . H 4 HOH B 90 777 777 HOH HOH . H 4 HOH B 91 778 778 HOH HOH . H 4 HOH B 92 780 780 HOH HOH . H 4 HOH B 93 783 783 HOH HOH . H 4 HOH B 94 785 785 HOH HOH . H 4 HOH B 95 787 787 HOH HOH . H 4 HOH B 96 788 788 HOH HOH . H 4 HOH B 97 790 790 HOH HOH . H 4 HOH B 98 793 793 HOH HOH . H 4 HOH B 99 794 794 HOH HOH . H 4 HOH B 100 795 795 HOH HOH . H 4 HOH B 101 796 796 HOH HOH . H 4 HOH B 102 798 798 HOH HOH . H 4 HOH B 103 800 800 HOH HOH . H 4 HOH B 104 801 801 HOH HOH . H 4 HOH B 105 806 806 HOH HOH . H 4 HOH B 106 807 807 HOH HOH . H 4 HOH B 107 808 808 HOH HOH . H 4 HOH B 108 810 810 HOH HOH . H 4 HOH B 109 814 814 HOH HOH . H 4 HOH B 110 816 816 HOH HOH . H 4 HOH B 111 818 818 HOH HOH . H 4 HOH B 112 821 821 HOH HOH . H 4 HOH B 113 823 823 HOH HOH . H 4 HOH B 114 824 824 HOH HOH . H 4 HOH B 115 825 825 HOH HOH . H 4 HOH B 116 828 828 HOH HOH . H 4 HOH B 117 833 833 HOH HOH . H 4 HOH B 118 834 834 HOH HOH . H 4 HOH B 119 835 835 HOH HOH . H 4 HOH B 120 839 839 HOH HOH . H 4 HOH B 121 842 842 HOH HOH . H 4 HOH B 122 845 845 HOH HOH . H 4 HOH B 123 847 847 HOH HOH . H 4 HOH B 124 851 851 HOH HOH . H 4 HOH B 125 858 858 HOH HOH . H 4 HOH B 126 860 860 HOH HOH . H 4 HOH B 127 864 864 HOH HOH . H 4 HOH B 128 865 865 HOH HOH . H 4 HOH B 129 866 866 HOH HOH . H 4 HOH B 130 867 867 HOH HOH . H 4 HOH B 131 872 872 HOH HOH . H 4 HOH B 132 875 875 HOH HOH . H 4 HOH B 133 877 877 HOH HOH . H 4 HOH B 134 878 878 HOH HOH . H 4 HOH B 135 879 879 HOH HOH . H 4 HOH B 136 880 880 HOH HOH . H 4 HOH B 137 883 883 HOH HOH . H 4 HOH B 138 887 887 HOH HOH . H 4 HOH B 139 890 890 HOH HOH . H 4 HOH B 140 892 892 HOH HOH . H 4 HOH B 141 894 894 HOH HOH . H 4 HOH B 142 895 895 HOH HOH . H 4 HOH B 143 896 896 HOH HOH . H 4 HOH B 144 901 901 HOH HOH . H 4 HOH B 145 903 903 HOH HOH . H 4 HOH B 146 904 904 HOH HOH . H 4 HOH B 147 910 910 HOH HOH . H 4 HOH B 148 912 912 HOH HOH . H 4 HOH B 149 913 913 HOH HOH . H 4 HOH B 150 915 915 HOH HOH . H 4 HOH B 151 916 916 HOH HOH . H 4 HOH B 152 917 917 HOH HOH . H 4 HOH B 153 920 920 HOH HOH . H 4 HOH B 154 932 932 HOH HOH . H 4 HOH B 155 933 933 HOH HOH . H 4 HOH B 156 938 938 HOH HOH . H 4 HOH B 157 939 939 HOH HOH . H 4 HOH B 158 940 940 HOH HOH . H 4 HOH B 159 942 942 HOH HOH . H 4 HOH B 160 943 943 HOH HOH . H 4 HOH B 161 946 946 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.767 _atom_site.Cartn_y -1.898 _atom_site.Cartn_z -5.527 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #