data_3I46 # _model_server_result.job_id eMek36T1uiSq4Ol5QwxcJw _model_server_result.datetime_utc '2025-03-04 15:29:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":404}' # _entry.id 3I46 # _exptl.entry_id 3I46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I46 _cell.length_a 68.093 _cell.length_b 70.195 _cell.length_c 129.584 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 142 A CYS 122 1_555 A SG CYS 178 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 B SG CYS 142 B CYS 122 1_555 B SG CYS 178 B CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A OE2 GLU 73 A GLU 53 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 A OD2 ASP 214 A ASP 194 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.19 ? metalc ? metalc3 B OE2 GLU 73 B GLU 53 1_555 H CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc4 B OD2 ASP 214 B ASP 194 1_555 G CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc5 B OD1 ASN 216 B ASN 196 1_555 G CA CA . B CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3I46 _atom_sites.fract_transf_matrix[1][1] 0.014686 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007717 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 401 401 CA CA . D 2 CA A 1 402 402 CA CA . E 3 CL A 1 405 405 CL CL . F 3 CL A 1 406 406 CL CL . G 2 CA B 1 403 403 CA CA . H 2 CA B 1 404 404 CA CA . I 4 HOH A 1 298 2 HOH HOH . I 4 HOH A 2 299 6 HOH HOH . I 4 HOH A 3 300 7 HOH HOH . I 4 HOH A 4 301 9 HOH HOH . I 4 HOH A 5 302 10 HOH HOH . I 4 HOH A 6 303 11 HOH HOH . I 4 HOH A 7 304 12 HOH HOH . I 4 HOH A 8 305 14 HOH HOH . I 4 HOH A 9 306 15 HOH HOH . I 4 HOH A 10 307 21 HOH HOH . I 4 HOH A 11 308 23 HOH HOH . I 4 HOH A 12 309 31 HOH HOH . I 4 HOH A 13 310 32 HOH HOH . J 4 HOH B 1 298 1 HOH HOH . J 4 HOH B 2 299 3 HOH HOH . J 4 HOH B 3 300 4 HOH HOH . J 4 HOH B 4 301 5 HOH HOH . J 4 HOH B 5 302 8 HOH HOH . J 4 HOH B 6 303 13 HOH HOH . J 4 HOH B 7 304 16 HOH HOH . J 4 HOH B 8 305 17 HOH HOH . J 4 HOH B 9 306 18 HOH HOH . J 4 HOH B 10 307 19 HOH HOH . J 4 HOH B 11 308 20 HOH HOH . J 4 HOH B 12 309 22 HOH HOH . J 4 HOH B 13 310 24 HOH HOH . J 4 HOH B 14 311 25 HOH HOH . J 4 HOH B 15 312 26 HOH HOH . J 4 HOH B 16 313 27 HOH HOH . J 4 HOH B 17 314 28 HOH HOH . J 4 HOH B 18 315 29 HOH HOH . J 4 HOH B 19 316 30 HOH HOH . J 4 HOH B 20 317 33 HOH HOH . J 4 HOH B 21 318 34 HOH HOH . J 4 HOH B 22 319 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -32.006 _atom_site.Cartn_y -8.59 _atom_site.Cartn_z -5.299 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 111.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #