data_3I4S # _model_server_result.job_id VsDgWWKh1qSw_sIT-MYUHw _model_server_result.datetime_utc '2024-10-20 03:32:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3I4S # _exptl.entry_id 3I4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3I4S _cell.length_a 104.02 _cell.length_b 104.02 _cell.length_c 53.563 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3I4S _atom_sites.fract_transf_matrix[1][1] 0.009614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01867 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 1 1 GOL GOL . D 3 HOH A 1 2 2 HOH HOH . D 3 HOH A 2 4 4 HOH HOH . D 3 HOH A 3 5 5 HOH HOH . D 3 HOH A 4 6 6 HOH HOH . D 3 HOH A 5 7 7 HOH HOH . D 3 HOH A 6 8 8 HOH HOH . D 3 HOH A 7 9 9 HOH HOH . D 3 HOH A 8 11 11 HOH HOH . D 3 HOH A 9 12 12 HOH HOH . D 3 HOH A 10 13 13 HOH HOH . D 3 HOH A 11 14 14 HOH HOH . D 3 HOH A 12 15 15 HOH HOH . D 3 HOH A 13 16 16 HOH HOH . D 3 HOH A 14 17 17 HOH HOH . D 3 HOH A 15 20 20 HOH HOH . D 3 HOH A 16 22 22 HOH HOH . D 3 HOH A 17 23 23 HOH HOH . D 3 HOH A 18 24 24 HOH HOH . D 3 HOH A 19 25 25 HOH HOH . D 3 HOH A 20 27 27 HOH HOH . D 3 HOH A 21 28 28 HOH HOH . D 3 HOH A 22 29 29 HOH HOH . D 3 HOH A 23 31 31 HOH HOH . D 3 HOH A 24 181 181 HOH HOH . D 3 HOH A 25 182 33 HOH HOH . D 3 HOH A 26 183 183 HOH HOH . D 3 HOH A 27 184 184 HOH HOH . D 3 HOH A 28 185 34 HOH HOH . D 3 HOH A 29 186 35 HOH HOH . D 3 HOH A 30 187 36 HOH HOH . D 3 HOH A 31 188 37 HOH HOH . D 3 HOH A 32 189 38 HOH HOH . D 3 HOH A 33 190 190 HOH HOH . D 3 HOH A 34 191 41 HOH HOH . D 3 HOH A 35 192 192 HOH HOH . D 3 HOH A 36 193 193 HOH HOH . D 3 HOH A 37 194 42 HOH HOH . D 3 HOH A 38 195 44 HOH HOH . D 3 HOH A 39 196 46 HOH HOH . D 3 HOH A 40 197 197 HOH HOH . D 3 HOH A 41 198 48 HOH HOH . D 3 HOH A 42 199 49 HOH HOH . D 3 HOH A 43 200 50 HOH HOH . D 3 HOH A 44 201 51 HOH HOH . D 3 HOH A 45 202 202 HOH HOH . D 3 HOH A 46 203 52 HOH HOH . D 3 HOH A 47 204 204 HOH HOH . D 3 HOH A 48 205 54 HOH HOH . D 3 HOH A 49 206 206 HOH HOH . D 3 HOH A 50 207 55 HOH HOH . D 3 HOH A 51 208 208 HOH HOH . D 3 HOH A 52 209 60 HOH HOH . D 3 HOH A 53 210 63 HOH HOH . D 3 HOH A 54 211 64 HOH HOH . D 3 HOH A 55 212 66 HOH HOH . D 3 HOH A 56 213 71 HOH HOH . D 3 HOH A 57 214 214 HOH HOH . D 3 HOH A 58 215 74 HOH HOH . D 3 HOH A 59 216 76 HOH HOH . D 3 HOH A 60 217 77 HOH HOH . D 3 HOH A 61 218 78 HOH HOH . D 3 HOH A 62 219 219 HOH HOH . D 3 HOH A 63 220 220 HOH HOH . D 3 HOH A 64 221 80 HOH HOH . D 3 HOH A 65 222 222 HOH HOH . D 3 HOH A 66 223 82 HOH HOH . D 3 HOH A 67 224 83 HOH HOH . D 3 HOH A 68 225 85 HOH HOH . D 3 HOH A 69 226 226 HOH HOH . D 3 HOH A 70 227 86 HOH HOH . D 3 HOH A 71 228 87 HOH HOH . D 3 HOH A 72 229 90 HOH HOH . D 3 HOH A 73 230 91 HOH HOH . D 3 HOH A 74 231 92 HOH HOH . D 3 HOH A 75 232 232 HOH HOH . D 3 HOH A 76 233 233 HOH HOH . D 3 HOH A 77 234 234 HOH HOH . D 3 HOH A 78 235 93 HOH HOH . D 3 HOH A 79 236 95 HOH HOH . D 3 HOH A 80 237 98 HOH HOH . D 3 HOH A 81 238 102 HOH HOH . D 3 HOH A 82 239 103 HOH HOH . D 3 HOH A 83 240 108 HOH HOH . D 3 HOH A 84 241 110 HOH HOH . D 3 HOH A 85 242 111 HOH HOH . D 3 HOH A 86 243 114 HOH HOH . D 3 HOH A 87 244 115 HOH HOH . D 3 HOH A 88 245 116 HOH HOH . D 3 HOH A 89 246 119 HOH HOH . D 3 HOH A 90 247 247 HOH HOH . D 3 HOH A 91 248 248 HOH HOH . D 3 HOH A 92 249 249 HOH HOH . D 3 HOH A 93 250 250 HOH HOH . D 3 HOH A 94 251 251 HOH HOH . D 3 HOH A 95 252 252 HOH HOH . D 3 HOH A 96 253 253 HOH HOH . D 3 HOH A 97 254 254 HOH HOH . D 3 HOH A 98 255 255 HOH HOH . D 3 HOH A 99 256 256 HOH HOH . D 3 HOH A 100 257 120 HOH HOH . D 3 HOH A 101 258 258 HOH HOH . D 3 HOH A 102 259 121 HOH HOH . D 3 HOH A 103 260 124 HOH HOH . D 3 HOH A 104 261 125 HOH HOH . D 3 HOH A 105 262 127 HOH HOH . D 3 HOH A 106 263 128 HOH HOH . D 3 HOH A 107 264 129 HOH HOH . D 3 HOH A 108 265 135 HOH HOH . D 3 HOH A 109 266 140 HOH HOH . D 3 HOH A 110 267 143 HOH HOH . D 3 HOH A 111 268 144 HOH HOH . D 3 HOH A 112 269 146 HOH HOH . D 3 HOH A 113 270 147 HOH HOH . D 3 HOH A 114 271 155 HOH HOH . D 3 HOH A 115 272 158 HOH HOH . D 3 HOH A 116 273 159 HOH HOH . D 3 HOH A 117 274 162 HOH HOH . D 3 HOH A 118 275 163 HOH HOH . D 3 HOH A 119 276 166 HOH HOH . D 3 HOH A 120 277 168 HOH HOH . D 3 HOH A 121 278 169 HOH HOH . D 3 HOH A 122 279 172 HOH HOH . D 3 HOH A 123 280 173 HOH HOH . D 3 HOH A 124 281 177 HOH HOH . D 3 HOH A 125 282 178 HOH HOH . D 3 HOH A 126 283 179 HOH HOH . D 3 HOH A 127 284 180 HOH HOH . D 3 HOH A 128 285 2 HOH HOH . D 3 HOH A 129 286 4 HOH HOH . D 3 HOH A 130 287 5 HOH HOH . D 3 HOH A 131 288 6 HOH HOH . D 3 HOH A 132 289 8 HOH HOH . D 3 HOH A 133 290 9 HOH HOH . D 3 HOH A 134 291 15 HOH HOH . D 3 HOH A 135 292 22 HOH HOH . D 3 HOH A 136 293 24 HOH HOH . D 3 HOH A 137 294 27 HOH HOH . E 3 HOH B 1 3 3 HOH HOH . E 3 HOH B 2 7 7 HOH HOH . E 3 HOH B 3 10 10 HOH HOH . E 3 HOH B 4 11 11 HOH HOH . E 3 HOH B 5 12 12 HOH HOH . E 3 HOH B 6 14 14 HOH HOH . E 3 HOH B 7 16 16 HOH HOH . E 3 HOH B 8 17 17 HOH HOH . E 3 HOH B 9 18 18 HOH HOH . E 3 HOH B 10 19 19 HOH HOH . E 3 HOH B 11 20 20 HOH HOH . E 3 HOH B 12 21 21 HOH HOH . E 3 HOH B 13 23 23 HOH HOH . E 3 HOH B 14 25 25 HOH HOH . E 3 HOH B 15 26 26 HOH HOH . E 3 HOH B 16 28 28 HOH HOH . E 3 HOH B 17 29 29 HOH HOH . E 3 HOH B 18 30 30 HOH HOH . E 3 HOH B 19 181 1 HOH HOH . E 3 HOH B 20 182 182 HOH HOH . E 3 HOH B 21 183 32 HOH HOH . E 3 HOH B 22 184 39 HOH HOH . E 3 HOH B 23 185 185 HOH HOH . E 3 HOH B 24 186 186 HOH HOH . E 3 HOH B 25 187 187 HOH HOH . E 3 HOH B 26 188 40 HOH HOH . E 3 HOH B 27 189 43 HOH HOH . E 3 HOH B 28 190 45 HOH HOH . E 3 HOH B 29 191 47 HOH HOH . E 3 HOH B 30 192 53 HOH HOH . E 3 HOH B 31 193 56 HOH HOH . E 3 HOH B 32 194 194 HOH HOH . E 3 HOH B 33 195 57 HOH HOH . E 3 HOH B 34 196 58 HOH HOH . E 3 HOH B 35 197 59 HOH HOH . E 3 HOH B 36 198 61 HOH HOH . E 3 HOH B 37 199 199 HOH HOH . E 3 HOH B 38 200 200 HOH HOH . E 3 HOH B 39 201 201 HOH HOH . E 3 HOH B 40 202 62 HOH HOH . E 3 HOH B 41 203 65 HOH HOH . E 3 HOH B 42 204 68 HOH HOH . E 3 HOH B 43 205 205 HOH HOH . E 3 HOH B 44 206 69 HOH HOH . E 3 HOH B 45 207 207 HOH HOH . E 3 HOH B 46 208 70 HOH HOH . E 3 HOH B 47 209 209 HOH HOH . E 3 HOH B 48 210 210 HOH HOH . E 3 HOH B 49 211 72 HOH HOH . E 3 HOH B 50 212 73 HOH HOH . E 3 HOH B 51 213 213 HOH HOH . E 3 HOH B 52 214 75 HOH HOH . E 3 HOH B 53 215 81 HOH HOH . E 3 HOH B 54 216 84 HOH HOH . E 3 HOH B 55 217 217 HOH HOH . E 3 HOH B 56 218 218 HOH HOH . E 3 HOH B 57 219 88 HOH HOH . E 3 HOH B 58 220 94 HOH HOH . E 3 HOH B 59 221 96 HOH HOH . E 3 HOH B 60 222 97 HOH HOH . E 3 HOH B 61 223 223 HOH HOH . E 3 HOH B 62 224 224 HOH HOH . E 3 HOH B 63 225 225 HOH HOH . E 3 HOH B 64 226 99 HOH HOH . E 3 HOH B 65 227 227 HOH HOH . E 3 HOH B 66 228 228 HOH HOH . E 3 HOH B 67 229 100 HOH HOH . E 3 HOH B 68 230 230 HOH HOH . E 3 HOH B 69 231 231 HOH HOH . E 3 HOH B 70 232 101 HOH HOH . E 3 HOH B 71 233 105 HOH HOH . E 3 HOH B 72 234 106 HOH HOH . E 3 HOH B 73 235 235 HOH HOH . E 3 HOH B 74 236 236 HOH HOH . E 3 HOH B 75 237 237 HOH HOH . E 3 HOH B 76 238 238 HOH HOH . E 3 HOH B 77 239 239 HOH HOH . E 3 HOH B 78 240 240 HOH HOH . E 3 HOH B 79 241 241 HOH HOH . E 3 HOH B 80 242 242 HOH HOH . E 3 HOH B 81 243 243 HOH HOH . E 3 HOH B 82 244 244 HOH HOH . E 3 HOH B 83 245 245 HOH HOH . E 3 HOH B 84 246 246 HOH HOH . E 3 HOH B 85 247 107 HOH HOH . E 3 HOH B 86 248 109 HOH HOH . E 3 HOH B 87 249 112 HOH HOH . E 3 HOH B 88 250 118 HOH HOH . E 3 HOH B 89 251 122 HOH HOH . E 3 HOH B 90 252 126 HOH HOH . E 3 HOH B 91 253 130 HOH HOH . E 3 HOH B 92 254 131 HOH HOH . E 3 HOH B 93 255 132 HOH HOH . E 3 HOH B 94 256 133 HOH HOH . E 3 HOH B 95 257 257 HOH HOH . E 3 HOH B 96 258 134 HOH HOH . E 3 HOH B 97 259 136 HOH HOH . E 3 HOH B 98 260 137 HOH HOH . E 3 HOH B 99 261 139 HOH HOH . E 3 HOH B 100 262 142 HOH HOH . E 3 HOH B 101 263 149 HOH HOH . E 3 HOH B 102 264 150 HOH HOH . E 3 HOH B 103 265 151 HOH HOH . E 3 HOH B 104 266 152 HOH HOH . E 3 HOH B 105 267 153 HOH HOH . E 3 HOH B 106 268 154 HOH HOH . E 3 HOH B 107 269 157 HOH HOH . E 3 HOH B 108 270 160 HOH HOH . E 3 HOH B 109 271 161 HOH HOH . E 3 HOH B 110 272 164 HOH HOH . E 3 HOH B 111 273 165 HOH HOH . E 3 HOH B 112 274 167 HOH HOH . E 3 HOH B 113 275 170 HOH HOH . E 3 HOH B 114 276 171 HOH HOH . E 3 HOH B 115 277 174 HOH HOH . E 3 HOH B 116 278 175 HOH HOH . E 3 HOH B 117 279 176 HOH HOH . E 3 HOH B 118 280 3 HOH HOH . E 3 HOH B 119 281 10 HOH HOH . E 3 HOH B 120 282 18 HOH HOH . E 3 HOH B 121 283 19 HOH HOH . E 3 HOH B 122 284 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 48.964 16.204 41.121 1 46.05 ? C1 GOL 1 B 1 HETATM 2 O O1 GOL . . . C 2 49.328 17.015 40.043 1 29.39 ? O1 GOL 1 B 1 HETATM 3 C C2 GOL . . . C 2 49.665 16.762 42.344 1 53.89 ? C2 GOL 1 B 1 HETATM 4 O O2 GOL . . . C 2 51.044 16.477 42.272 1 62.07 ? O2 GOL 1 B 1 HETATM 5 C C3 GOL . . . C 2 49.065 16.137 43.589 1 49.71 ? C3 GOL 1 B 1 HETATM 6 O O3 GOL . . . C 2 48.666 14.801 43.352 1 43.41 ? O3 GOL 1 B 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #