data_3I4Y # _model_server_result.job_id rnGEhfLuFPuyhzPIkpH6Yw _model_server_result.datetime_utc '2024-11-01 17:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3i4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3I4Y # _exptl.entry_id 3I4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.001 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,5-dichlorobenzene-1,2-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.81 _cell.angle_gamma 90 _cell.entry_id 3I4Y _cell.length_a 90.818 _cell.length_b 37.619 _cell.length_c 74.817 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3I4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -6.273537 0 74.553512 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O7 35C . A 35C 1 1_555 B FE FE . A FE 281 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc2 C O7 35C . A 35C 1 1_555 B FE FE . A FE 281 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc3 C O8 35C . A 35C 1 1_555 B FE FE . A FE 281 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc4 C O8 35C . A 35C 1 1_555 B FE FE . A FE 281 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 A OH TYR 152 A TYR 162 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? metalc ? metalc6 A NE2 HIS 210 A HIS 220 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc7 A NE2 HIS 212 A HIS 222 1_555 B FE FE . A FE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? # _chem_comp.formula 'C6 H4 Cl2 O2' _chem_comp.formula_weight 179.001 _chem_comp.id 35C _chem_comp.mon_nstd_flag . _chem_comp.name 3,5-dichlorobenzene-1,2-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C1 35C sing 1 n n C1 C2 35C doub 2 n y C1 C6 35C sing 3 n y O8 C2 35C sing 4 n n C2 C3 35C sing 5 n y C3 CL9 35C sing 6 n n C3 C4 35C doub 7 n y C5 C4 35C sing 8 n y C4 H4 35C sing 9 n n C6 C5 35C doub 10 n y C5 CL10 35C sing 11 n n C6 H6 35C sing 12 n n O7 HO7 35C sing 13 n n O8 HO8 35C sing 14 n n # _atom_sites.entry_id 3I4Y _atom_sites.fract_transf_matrix[1][1] 0.011011 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000926 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 281 281 FE FE . C 3 35C A 1 1 1 35C 35C . D 4 6PL A 1 282 1 6PL 6PL . E 5 HOH A 1 2 2 HOH HOH . E 5 HOH A 2 3 3 HOH HOH . E 5 HOH A 3 4 4 HOH HOH . E 5 HOH A 4 5 5 HOH HOH . E 5 HOH A 5 6 6 HOH HOH . E 5 HOH A 6 7 7 HOH HOH . E 5 HOH A 7 8 8 HOH HOH . E 5 HOH A 8 10 10 HOH HOH . E 5 HOH A 9 283 1 HOH HOH . E 5 HOH A 10 284 11 HOH HOH . E 5 HOH A 11 285 13 HOH HOH . E 5 HOH A 12 286 14 HOH HOH . E 5 HOH A 13 287 15 HOH HOH . E 5 HOH A 14 288 16 HOH HOH . E 5 HOH A 15 289 17 HOH HOH . E 5 HOH A 16 290 18 HOH HOH . E 5 HOH A 17 291 19 HOH HOH . E 5 HOH A 18 292 20 HOH HOH . E 5 HOH A 19 293 21 HOH HOH . E 5 HOH A 20 294 22 HOH HOH . E 5 HOH A 21 295 23 HOH HOH . E 5 HOH A 22 296 24 HOH HOH . E 5 HOH A 23 297 25 HOH HOH . E 5 HOH A 24 298 26 HOH HOH . E 5 HOH A 25 299 27 HOH HOH . E 5 HOH A 26 300 28 HOH HOH . E 5 HOH A 27 301 29 HOH HOH . E 5 HOH A 28 302 30 HOH HOH . E 5 HOH A 29 303 31 HOH HOH . E 5 HOH A 30 304 32 HOH HOH . E 5 HOH A 31 305 33 HOH HOH . E 5 HOH A 32 306 35 HOH HOH . E 5 HOH A 33 307 36 HOH HOH . E 5 HOH A 34 308 37 HOH HOH . E 5 HOH A 35 309 38 HOH HOH . E 5 HOH A 36 310 39 HOH HOH . E 5 HOH A 37 311 40 HOH HOH . E 5 HOH A 38 312 41 HOH HOH . E 5 HOH A 39 313 42 HOH HOH . E 5 HOH A 40 314 43 HOH HOH . E 5 HOH A 41 315 44 HOH HOH . E 5 HOH A 42 316 45 HOH HOH . E 5 HOH A 43 317 46 HOH HOH . E 5 HOH A 44 318 47 HOH HOH . E 5 HOH A 45 319 48 HOH HOH . E 5 HOH A 46 320 49 HOH HOH . E 5 HOH A 47 321 50 HOH HOH . E 5 HOH A 48 322 51 HOH HOH . E 5 HOH A 49 323 52 HOH HOH . E 5 HOH A 50 324 53 HOH HOH . E 5 HOH A 51 325 54 HOH HOH . E 5 HOH A 52 326 55 HOH HOH . E 5 HOH A 53 327 56 HOH HOH . E 5 HOH A 54 328 57 HOH HOH . E 5 HOH A 55 329 58 HOH HOH . E 5 HOH A 56 330 59 HOH HOH . E 5 HOH A 57 331 60 HOH HOH . E 5 HOH A 58 332 61 HOH HOH . E 5 HOH A 59 333 62 HOH HOH . E 5 HOH A 60 334 63 HOH HOH . E 5 HOH A 61 335 64 HOH HOH . E 5 HOH A 62 336 65 HOH HOH . E 5 HOH A 63 337 66 HOH HOH . E 5 HOH A 64 338 67 HOH HOH . E 5 HOH A 65 339 68 HOH HOH . E 5 HOH A 66 340 69 HOH HOH . E 5 HOH A 67 341 70 HOH HOH . E 5 HOH A 68 342 71 HOH HOH . E 5 HOH A 69 343 72 HOH HOH . E 5 HOH A 70 344 73 HOH HOH . E 5 HOH A 71 345 74 HOH HOH . E 5 HOH A 72 346 75 HOH HOH . E 5 HOH A 73 347 76 HOH HOH . E 5 HOH A 74 348 77 HOH HOH . E 5 HOH A 75 349 78 HOH HOH . E 5 HOH A 76 350 79 HOH HOH . E 5 HOH A 77 351 81 HOH HOH . E 5 HOH A 78 352 82 HOH HOH . E 5 HOH A 79 353 83 HOH HOH . E 5 HOH A 80 354 84 HOH HOH . E 5 HOH A 81 355 85 HOH HOH . E 5 HOH A 82 356 86 HOH HOH . E 5 HOH A 83 357 87 HOH HOH . E 5 HOH A 84 358 88 HOH HOH . E 5 HOH A 85 359 89 HOH HOH . E 5 HOH A 86 360 91 HOH HOH . E 5 HOH A 87 361 92 HOH HOH . E 5 HOH A 88 362 93 HOH HOH . E 5 HOH A 89 363 94 HOH HOH . E 5 HOH A 90 364 95 HOH HOH . E 5 HOH A 91 365 96 HOH HOH . E 5 HOH A 92 366 97 HOH HOH . E 5 HOH A 93 367 98 HOH HOH . E 5 HOH A 94 368 99 HOH HOH . E 5 HOH A 95 369 100 HOH HOH . E 5 HOH A 96 370 101 HOH HOH . E 5 HOH A 97 371 102 HOH HOH . E 5 HOH A 98 372 103 HOH HOH . E 5 HOH A 99 373 104 HOH HOH . E 5 HOH A 100 374 105 HOH HOH . E 5 HOH A 101 375 106 HOH HOH . E 5 HOH A 102 376 107 HOH HOH . E 5 HOH A 103 377 108 HOH HOH . E 5 HOH A 104 378 109 HOH HOH . E 5 HOH A 105 379 110 HOH HOH . E 5 HOH A 106 380 111 HOH HOH . E 5 HOH A 107 381 112 HOH HOH . E 5 HOH A 108 382 113 HOH HOH . E 5 HOH A 109 383 114 HOH HOH . E 5 HOH A 110 384 115 HOH HOH . E 5 HOH A 111 385 116 HOH HOH . E 5 HOH A 112 386 117 HOH HOH . E 5 HOH A 113 387 118 HOH HOH . E 5 HOH A 114 388 119 HOH HOH . E 5 HOH A 115 389 120 HOH HOH . E 5 HOH A 116 390 121 HOH HOH . E 5 HOH A 117 391 122 HOH HOH . E 5 HOH A 118 392 123 HOH HOH . E 5 HOH A 119 393 124 HOH HOH . E 5 HOH A 120 394 125 HOH HOH . E 5 HOH A 121 395 126 HOH HOH . E 5 HOH A 122 396 127 HOH HOH . E 5 HOH A 123 397 128 HOH HOH . E 5 HOH A 124 398 129 HOH HOH . E 5 HOH A 125 399 130 HOH HOH . E 5 HOH A 126 400 131 HOH HOH . E 5 HOH A 127 401 132 HOH HOH . E 5 HOH A 128 402 133 HOH HOH . E 5 HOH A 129 403 134 HOH HOH . E 5 HOH A 130 404 135 HOH HOH . E 5 HOH A 131 405 136 HOH HOH . E 5 HOH A 132 406 137 HOH HOH . E 5 HOH A 133 407 138 HOH HOH . E 5 HOH A 134 408 139 HOH HOH . E 5 HOH A 135 409 140 HOH HOH . E 5 HOH A 136 410 141 HOH HOH . E 5 HOH A 137 411 142 HOH HOH . E 5 HOH A 138 412 143 HOH HOH . E 5 HOH A 139 413 144 HOH HOH . E 5 HOH A 140 414 145 HOH HOH . E 5 HOH A 141 415 146 HOH HOH . E 5 HOH A 142 416 148 HOH HOH . E 5 HOH A 143 417 149 HOH HOH . E 5 HOH A 144 418 151 HOH HOH . E 5 HOH A 145 419 152 HOH HOH . E 5 HOH A 146 420 153 HOH HOH . E 5 HOH A 147 421 154 HOH HOH . E 5 HOH A 148 422 155 HOH HOH . E 5 HOH A 149 423 156 HOH HOH . E 5 HOH A 150 424 158 HOH HOH . E 5 HOH A 151 425 159 HOH HOH . E 5 HOH A 152 426 160 HOH HOH . E 5 HOH A 153 427 163 HOH HOH . E 5 HOH A 154 428 164 HOH HOH . E 5 HOH A 155 429 165 HOH HOH . E 5 HOH A 156 430 167 HOH HOH . E 5 HOH A 157 431 168 HOH HOH . E 5 HOH A 158 432 169 HOH HOH . E 5 HOH A 159 433 172 HOH HOH . E 5 HOH A 160 434 173 HOH HOH . E 5 HOH A 161 435 174 HOH HOH . E 5 HOH A 162 436 175 HOH HOH . E 5 HOH A 163 437 176 HOH HOH . E 5 HOH A 164 438 177 HOH HOH . E 5 HOH A 165 439 178 HOH HOH . E 5 HOH A 166 440 181 HOH HOH . E 5 HOH A 167 441 182 HOH HOH . E 5 HOH A 168 442 183 HOH HOH . E 5 HOH A 169 443 186 HOH HOH . E 5 HOH A 170 444 188 HOH HOH . E 5 HOH A 171 445 191 HOH HOH . E 5 HOH A 172 446 193 HOH HOH . E 5 HOH A 173 447 194 HOH HOH . E 5 HOH A 174 448 195 HOH HOH . E 5 HOH A 175 449 196 HOH HOH . E 5 HOH A 176 450 198 HOH HOH . E 5 HOH A 177 451 199 HOH HOH . E 5 HOH A 178 452 200 HOH HOH . E 5 HOH A 179 453 203 HOH HOH . E 5 HOH A 180 454 205 HOH HOH . E 5 HOH A 181 455 206 HOH HOH . E 5 HOH A 182 456 207 HOH HOH . E 5 HOH A 183 457 208 HOH HOH . E 5 HOH A 184 458 210 HOH HOH . E 5 HOH A 185 459 211 HOH HOH . E 5 HOH A 186 460 212 HOH HOH . E 5 HOH A 187 461 216 HOH HOH . E 5 HOH A 188 462 217 HOH HOH . E 5 HOH A 189 463 218 HOH HOH . E 5 HOH A 190 464 219 HOH HOH . E 5 HOH A 191 465 220 HOH HOH . E 5 HOH A 192 466 221 HOH HOH . E 5 HOH A 193 467 222 HOH HOH . E 5 HOH A 194 468 223 HOH HOH . E 5 HOH A 195 469 224 HOH HOH . E 5 HOH A 196 470 225 HOH HOH . E 5 HOH A 197 471 226 HOH HOH . E 5 HOH A 198 472 228 HOH HOH . E 5 HOH A 199 473 229 HOH HOH . E 5 HOH A 200 474 230 HOH HOH . E 5 HOH A 201 475 231 HOH HOH . E 5 HOH A 202 476 232 HOH HOH . E 5 HOH A 203 477 234 HOH HOH . E 5 HOH A 204 478 235 HOH HOH . E 5 HOH A 205 479 236 HOH HOH . E 5 HOH A 206 480 237 HOH HOH . E 5 HOH A 207 481 238 HOH HOH . E 5 HOH A 208 482 239 HOH HOH . E 5 HOH A 209 483 240 HOH HOH . E 5 HOH A 210 484 241 HOH HOH . E 5 HOH A 211 485 242 HOH HOH . E 5 HOH A 212 486 243 HOH HOH . E 5 HOH A 213 487 244 HOH HOH . E 5 HOH A 214 488 245 HOH HOH . E 5 HOH A 215 489 246 HOH HOH . E 5 HOH A 216 490 247 HOH HOH . E 5 HOH A 217 491 248 HOH HOH . E 5 HOH A 218 492 249 HOH HOH . E 5 HOH A 219 493 250 HOH HOH . E 5 HOH A 220 494 251 HOH HOH . E 5 HOH A 221 495 252 HOH HOH . E 5 HOH A 222 496 253 HOH HOH . E 5 HOH A 223 497 254 HOH HOH . E 5 HOH A 224 498 255 HOH HOH . E 5 HOH A 225 499 256 HOH HOH . E 5 HOH A 226 500 257 HOH HOH . E 5 HOH A 227 501 258 HOH HOH . E 5 HOH A 228 502 259 HOH HOH . E 5 HOH A 229 503 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 35C . A . C 3 2.963 -2.859 18.88 0.5 36.08 ? C1 35C 1 A 1 HETATM 2 C C1 35C . B . C 3 2.747 -2.721 18.341 0.5 25.29 ? C1 35C 1 A 1 HETATM 3 C C2 35C . A . C 3 3.564 -1.665 19.232 0.5 35.36 ? C2 35C 1 A 1 HETATM 4 C C2 35C . B . C 3 3.572 -1.911 19.06 0.5 24.45 ? C2 35C 1 A 1 HETATM 5 C C3 35C . A . C 3 3.035 -0.868 20.237 0.5 36.64 ? C3 35C 1 A 1 HETATM 6 C C3 35C . B . C 3 3.093 -1.146 20.071 0.5 26.34 ? C3 35C 1 A 1 HETATM 7 C C4 35C . A . C 3 1.891 -1.267 20.899 0.5 36.06 ? C4 35C 1 A 1 HETATM 8 C C4 35C . B . C 3 1.753 -1.171 20.401 0.5 26.2 ? C4 35C 1 A 1 HETATM 9 C C5 35C . A . C 3 1.301 -2.464 20.531 0.5 36.03 ? C5 35C 1 A 1 HETATM 10 C C5 35C . B . C 3 0.916 -1.993 19.657 0.5 24.9 ? C5 35C 1 A 1 HETATM 11 C C6 35C . A . C 3 1.815 -3.267 19.529 0.5 36.21 ? C6 35C 1 A 1 HETATM 12 C C6 35C . B . C 3 1.392 -2.779 18.621 0.5 23.75 ? C6 35C 1 A 1 HETATM 13 O O7 35C . A . C 3 3.488 -3.637 17.899 0.5 35.51 ? O7 35C 1 A 1 HETATM 14 O O7 35C . B . C 3 3.339 -3.417 17.36 0.5 24.54 ? O7 35C 1 A 1 HETATM 15 O O8 35C . A . C 3 4.677 -1.26 18.569 0.5 35.54 ? O8 35C 1 A 1 HETATM 16 O O8 35C . B . C 3 4.885 -1.864 18.736 0.5 27.74 ? O8 35C 1 A 1 HETATM 17 CL CL9 35C . A . C 3 3.8 0.687 20.687 0.5 35.4 ? CL9 35C 1 A 1 HETATM 18 CL CL9 35C . B . C 3 4.278 -0.115 20.891 0.5 25.12 ? CL9 35C 1 A 1 HETATM 19 CL CL10 35C . A . C 3 -0.177 -2.977 21.374 0.5 37.08 ? CL10 35C 1 A 1 HETATM 20 CL CL10 35C . B . C 3 -0.811 -2.007 20.07 0.5 25.81 ? CL10 35C 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #